BLASTX nr result

ID: Coptis24_contig00015998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015998
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]              191   4e-46
ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-43
ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-41
ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein...   172   1e-40
ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein...   172   1e-40

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  191 bits (485), Expect = 4e-46
 Identities = 101/236 (42%), Positives = 139/236 (58%), Gaps = 2/236 (0%)
 Frame = +2

Query: 20   VVETALAADEQFEACLPSSCGKGPNISYPFWINGNQSSFCGFPGFELSCKDREPILTMEG 199
            V+ET L+AD +FEAC P +CG GPN+SYPFWI   Q S+CGFP F ++C D +P+LT+  
Sbjct: 338  VIET-LSADPKFEACKPHNCGTGPNVSYPFWIPKEQESYCGFPNFSITCNDEKPVLTISD 396

Query: 200  DEYIIRKIFYGNQSFLMTKAGV-SNDICXXXXXXXXXXXXVFTVVPATHNLLLFFNCTAL 376
            D Y+IR+IFY N SFLM+ + V   D C             F   P+ ++LLLF+NCT++
Sbjct: 397  DYYVIREIFYTNHSFLMSNSAVYDGDSCPTPLHNFSLDRTPFNYSPSHYDLLLFYNCTSV 456

Query: 377  QSREYLRYELDCTTTANPRHRLLAMLSNDPMLTYVNQSGQ-CDNSAVIPVDTIRNGSLGT 553
               E L   +DC + A   H   +   ++  L Y+N S + C +   +PVD       G 
Sbjct: 457  PV-ETLTIPIDCMSNAT-LHSFASF--HEEALEYMNFSTESCQSMVNVPVDIDGEEGFGN 512

Query: 554  TVYRDFIDEFLNKGFHLRWTASRCEDCSESGGRCGFDYVLHKFMCFCPDRPHQRRC 721
             +  +F  E L +GF L WTA+ C  C  SGGRCGF+   ++F+CFC DRPH R C
Sbjct: 513  LLNWNF-TEILREGFVLSWTANNCSSCERSGGRCGFEN--NEFICFCQDRPHLRTC 565


>ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|222863881|gb|EEF01012.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  180 bits (456), Expect = 9e-43
 Identities = 99/248 (39%), Positives = 134/248 (54%), Gaps = 6/248 (2%)
 Frame = +2

Query: 5   ITFLLVVETALAADEQFEACLPSSCGKGPNISYPFWINGNQSSFCGFPGFELSCKDR-EP 181
           +TF L+ + A   D QF AC P SC  G +IS+PF I G Q  FCG+PGF +SC D+ +P
Sbjct: 19  VTFFLLAKKASCTDPQFLACNPKSCSDGQSISFPFHIQGVQPDFCGYPGFTISCNDKGKP 78

Query: 182 ILTMEGDEYIIRKIFYGNQSFLMTKAGV--SNDICXXXXXXXXXXXXVFTVVPATHNLLL 355
           +  +  +EYII +I+Y NQS  ++ A V   +  C             F     + +L L
Sbjct: 79  VFNLSNNEYIIHEIYYQNQSLRVSNAAVFGKSPSCTPQIQNISLDDGRFHRSSNSKDLFL 138

Query: 356 FFNCTAL---QSREYLRYELDCTTTANPRHRLLAMLSNDPMLTYVNQSGQCDNSAVIPVD 526
            +NC +     + E L Y++DC    N   R LAML +DP+L   +   +C    + PVD
Sbjct: 139 LYNCNSTLLSNNSELLNYKVDCHGE-NETVRTLAMLEDDPLLG--STLDKCRTRVLAPVD 195

Query: 527 TIRNGSLGTTVYRDFIDEFLNKGFHLRWTASRCEDCSESGGRCGFDYVLHKFMCFCPDRP 706
             R  ++GT          L +GF L WTAS C  C ESGG+CGFD   + F CFCPDRP
Sbjct: 196 VYRGENVGTEGML-----LLERGFVLNWTASDCSICEESGGKCGFDTATYHFQCFCPDRP 250

Query: 707 HQRRCSSA 730
           H +RC SA
Sbjct: 251 HAKRCYSA 258


>ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|222863883|gb|EEF01014.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  176 bits (445), Expect = 2e-41
 Identities = 95/251 (37%), Positives = 131/251 (52%), Gaps = 6/251 (2%)
 Frame = +2

Query: 5   ITFLLVVETALAADEQFEACLPSSCGKGPNISYPFWINGNQSSFCGFPGFELSCKDR-EP 181
           +T  L+ + A   D QF AC P SCG   NIS+PF I G Q  +CG+PGF +SC D+ +P
Sbjct: 19  VTLFLLAKKASCTDPQFLACNPKSCGDDQNISFPFHIQGVQPDYCGYPGFNISCNDKGKP 78

Query: 182 ILTMEGDEYIIRKIFYGNQSFLMTKAGV--SNDICXXXXXXXXXXXXVFTVVPATHNLLL 355
           +  +  +EYII +I+Y NQS  ++ A V   +  C             F     +  L L
Sbjct: 79  VFNLSNNEYIIDEIYYQNQSLRVSNAAVFGKSPSCTPQIQNISLDDGRFHRSSNSKGLFL 138

Query: 356 FFNCTAL---QSREYLRYELDCTTTANPRHRLLAMLSNDPMLTYVNQSGQCDNSAVIPVD 526
            +NC +     + + L Y++DC    N     LAML  DP+L   +   +C    + PVD
Sbjct: 139 LYNCNSTLLSNNSKLLNYKVDCPGE-NETVWALAMLDGDPLLG--STLDKCGTRVLAPVD 195

Query: 527 TIRNGSLGTTVYRDFIDEFLNKGFHLRWTASRCEDCSESGGRCGFDYVLHKFMCFCPDRP 706
             R  ++G        +  L +GF L WTAS C DC ESGG+CGFD   + F CFCPDRP
Sbjct: 196 VYRGENVGA-------ERMLERGFVLNWTASNCSDCEESGGKCGFDTATYDFKCFCPDRP 248

Query: 707 HQRRCSSASPF 739
           H  +C+S   F
Sbjct: 249 HTWQCNSGESF 259


>ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 645

 Score =  172 bits (437), Expect = 1e-40
 Identities = 91/240 (37%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
 Frame = +2

Query: 5   ITFLLVVETALAADEQFEACLPSSCGKGPNISYPFWINGNQSSFCGFPGFELSCKDREPI 184
           I F+      L+ D++FEAC P SCG GPNISYPFWI  + S FCGFP F +SCKD  PI
Sbjct: 12  IFFIFFNCQTLSLDQKFEACAPKSCGNGPNISYPFWIAHSHSPFCGFPSFRISCKDENPI 71

Query: 185 LTMEGDEYIIRKIFYGNQSFLMTKAGVSNDICXXXXXXXXXXXXVFTVVPATHNLLLFFN 364
           + +  ++YIIR I Y N SFL+T   V +  C             F+          F+N
Sbjct: 72  IRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFSYSSDHIGFFFFYN 131

Query: 365 CTALQSREYLRYELDCTTTANPRHRLLAMLSNDPMLTYVN-QSGQCDNSAVIPVDTIRNG 541
           CT+L       Y +DC++T+   H   A   ++  L ++N  S  C +S  +P+D     
Sbjct: 132 CTSLPPN--YSYPIDCSSTSK-LHSFGAF--HEGYLEFMNFSSNSCQSSVEVPMDFNNED 186

Query: 542 SLGTTVYRDFIDEFLNKGFHLRWTASRCEDCSESGGRCGFDYVLHKFMCFCPDRPHQRRC 721
              T + R    + L  GF L W+   C  C  SGGRCG +   ++F+CFCPD PH + C
Sbjct: 187 DDFTGLLRKNYTDLLKMGFSLNWSGQSCSTCDTSGGRCGVE--KNQFVCFCPDGPHLKTC 244


>ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 652

 Score =  172 bits (437), Expect = 1e-40
 Identities = 91/240 (37%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
 Frame = +2

Query: 5   ITFLLVVETALAADEQFEACLPSSCGKGPNISYPFWINGNQSSFCGFPGFELSCKDREPI 184
           I F+      L+ D++FEAC P SCG GPNISYPFWI  + S FCGFP F +SCKD  PI
Sbjct: 12  IFFIFFNCQTLSLDQKFEACAPKSCGNGPNISYPFWIAHSHSPFCGFPSFRISCKDENPI 71

Query: 185 LTMEGDEYIIRKIFYGNQSFLMTKAGVSNDICXXXXXXXXXXXXVFTVVPATHNLLLFFN 364
           + +  ++YIIR I Y N SFL+T   V +  C             F+          F+N
Sbjct: 72  IRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFSYSSDHIGFFFFYN 131

Query: 365 CTALQSREYLRYELDCTTTANPRHRLLAMLSNDPMLTYVN-QSGQCDNSAVIPVDTIRNG 541
           CT+L       Y +DC++T+   H   A   ++  L ++N  S  C +S  +P+D     
Sbjct: 132 CTSLPPN--YSYPIDCSSTSK-LHSFGAF--HEGYLEFMNFSSNSCQSSVEVPMDFNNED 186

Query: 542 SLGTTVYRDFIDEFLNKGFHLRWTASRCEDCSESGGRCGFDYVLHKFMCFCPDRPHQRRC 721
              T + R    + L  GF L W+   C  C  SGGRCG +   ++F+CFCPD PH + C
Sbjct: 187 DDFTGLLRKNYTDLLKMGFSLNWSGQSCSTCDTSGGRCGVE--KNQFVCFCPDGPHLKTC 244


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