BLASTX nr result

ID: Coptis24_contig00015997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015997
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779...    63   3e-08
ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775...    62   4e-08
ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266...    60   2e-07
gb|AFK37094.1| unknown [Lotus japonicus]                               58   9e-07
ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago ...    57   1e-06

>ref|XP_003534339.1| PREDICTED: uncharacterized protein LOC100779666 [Glycine max]
          Length = 191

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
 Frame = +3

Query: 3   EFKRSKAKDMKLDGMSCHLPISPAFVLGAFASTSLLSAQIIGNTLIF---CSRGKNIIAW 173
           E KR+K  D++ +G  CHLP SPAF LG  +   L+ +QI+GN+++F   CS GK     
Sbjct: 36  ETKRNKKGDLRWNGKLCHLPSSPAFGLGVASLVCLVLSQIVGNSILFRTYCSGGKRNA-- 93

Query: 174 KQRIPF---SLMILSWITFG 224
           K  IPF    L+++SW++FG
Sbjct: 94  KFEIPFVARILLLISWLSFG 113


>ref|XP_003517098.1| PREDICTED: uncharacterized protein LOC100775915 [Glycine max]
          Length = 191

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
 Frame = +3

Query: 3   EFKRSKAKDMKLDGMSCHLPISPAFVLGAFASTSLLSAQIIGNTLIF---CSRGKNIIAW 173
           E KR+K  D++ +G  CHLP SPAF LG  +   L+ +QI+GN+++F   CS GK     
Sbjct: 36  ETKRNKKGDLRWNGKLCHLPSSPAFGLGIASLVCLVLSQIVGNSILFKTYCSGGKRNA-- 93

Query: 174 KQRIPF---SLMILSWITFG 224
           K  IPF    L+++SW++FG
Sbjct: 94  KCEIPFVARILLLISWLSFG 113


>ref|XP_002269579.1| PREDICTED: uncharacterized protein LOC100266552 [Vitis vinifera]
           gi|296085473|emb|CBI29205.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
 Frame = +3

Query: 3   EFKRSKAKDMKLDGMSCHLPISPAFVLGAFASTSLLSAQIIGNTLIFCSR---GKNIIAW 173
           EFKRSK KD+KL+G  C+L  S AF LG  A   L  A I+GN ++ C R   G+   + 
Sbjct: 30  EFKRSKKKDVKLNGKLCYLAESGAFQLGVAALICLFIAHILGN-MVICRRICSGEKSSSG 88

Query: 174 KQRIPF---SLMILSWITFG 224
           K + P+   +L+++SWI+FG
Sbjct: 89  KAKTPWITSTLLVVSWISFG 108


>gb|AFK37094.1| unknown [Lotus japonicus]
          Length = 182

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   EFKRSKAKDMKLDGMSCHLPISPAFVLGAFASTSLLSAQIIGNTLIF---CSRGKNIIAW 173
           EFKR+K +D++ +G  C+LP S AF LG  A  S   AQ+I N+++F   CS GK     
Sbjct: 33  EFKRNKKEDLRWNGKLCYLPSSQAFGLGIAALVSFFVAQVIVNSILFKNSCSGGKRNAQH 92

Query: 174 K-QRIPFSLMILSWITFG 224
           K   +   L+++SW+ FG
Sbjct: 93  KIPTVARLLLLISWVDFG 110


>ref|XP_003612494.1| hypothetical protein MTR_5g025640 [Medicago truncatula]
           gi|355513829|gb|AES95452.1| hypothetical protein
           MTR_5g025640 [Medicago truncatula]
          Length = 183

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
 Frame = +3

Query: 3   EFKRSKAKDMKLDGMSCHLPISPAFVLGAFASTSLLSAQIIGNTLIF---CSRGKNIIAW 173
           E  ++K  D++ +G  C+LP S A+ LG  A   L  AQIIGN+++F   CSR K    +
Sbjct: 33  EITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQIIGNSMLFKNSCSRRKKNAQY 92

Query: 174 KQRIPF---SLMILSWITFGCT 230
           K  +PF    L+++SW++FG T
Sbjct: 93  K--LPFFARLLILISWLSFGVT 112


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