BLASTX nr result

ID: Coptis24_contig00015975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015975
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525810.1| DNA-damage-inducible protein f, putative [Ri...   394   e-107
ref|XP_002305555.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_002278724.2| PREDICTED: MATE efflux family protein 3, chl...   379   e-103
emb|CBI37797.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_003618104.1| Transporter, putative [Medicago truncatula] ...   378   e-102

>ref|XP_002525810.1| DNA-damage-inducible protein f, putative [Ricinus communis]
            gi|223534897|gb|EEF36584.1| DNA-damage-inducible protein
            f, putative [Ricinus communis]
          Length = 605

 Score =  394 bits (1012), Expect = e-107
 Identities = 198/275 (72%), Positives = 229/275 (83%)
 Frame = +2

Query: 2    GNLSSVVLLPMLMYSFHLGVTGAAIATVISQYIVTFLMIWSLNKRAILLPPKMENLHFGG 181
            GNLS+++L P+LMYS  LGVTGAAI+TVISQYI+ FLMIW LNKR ILLPPK+ +L F  
Sbjct: 313  GNLSAILLFPILMYSLKLGVTGAAISTVISQYIIAFLMIWHLNKRVILLPPKLGDLQFDV 372

Query: 182  YLKSGGFLIGRTLAILVTMTLGTSMAARQGPLAMAAHQICLQVWLAVSLLTDALASSGQA 361
            Y+KSGGFLIGRTLA+L T TL TSMAARQGP+AMAAHQIC+QVWLAVSLLTDA A+S QA
Sbjct: 373  YVKSGGFLIGRTLAVLTTTTLATSMAARQGPVAMAAHQICMQVWLAVSLLTDAFAASAQA 432

Query: 362  MIASSFSKGDYSTVKEIXXXXXXXXXXXXVSLAILLGGSFGSLATLFTQDTEVLGIVRSL 541
            +IAS  SKGDY  V+E+            VSLA +LG SFGS+ATLFT+D EVLGIVR+ 
Sbjct: 433  LIASYSSKGDYKNVREVSNFVLKIGLLTGVSLAAILGVSFGSIATLFTKDAEVLGIVRTG 492

Query: 542  VLFVSASQPLNALAFIADGLYYGVSDFAYAARSMMVVGVVSSAFFLYASPIYGLSGVWWG 721
            +LFVSASQPLNALAFI DGL+YGVSDFAYAARSMM+VGV+SS F +YA  + GL GVW G
Sbjct: 493  ILFVSASQPLNALAFIFDGLHYGVSDFAYAARSMMLVGVISSVFLIYAPSVIGLPGVWSG 552

Query: 722  LSLCMGLRTAAGYIRLMSKSGPWWFLHKDLQRTEV 826
            L+L MGLRTAAGYIR++SKSGPWWFLHKDLQ  ++
Sbjct: 553  LALFMGLRTAAGYIRILSKSGPWWFLHKDLQSVQI 587


>ref|XP_002305555.1| predicted protein [Populus trichocarpa] gi|222848519|gb|EEE86066.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  387 bits (994), Expect = e-105
 Identities = 195/269 (72%), Positives = 228/269 (84%)
 Frame = +2

Query: 2   GNLSSVVLLPMLMYSFHLGVTGAAIATVISQYIVTFLMIWSLNKRAILLPPKMENLHFGG 181
           GNLS++ L P+LMY   LGVTGAAI+TV+SQY+VTFLM+W LNKR ILLPPK+  L FG 
Sbjct: 175 GNLSAIFLFPLLMYYLKLGVTGAAISTVVSQYLVTFLMVWQLNKRVILLPPKVGELQFGV 234

Query: 182 YLKSGGFLIGRTLAILVTMTLGTSMAARQGPLAMAAHQICLQVWLAVSLLTDALASSGQA 361
           Y+KSGGFLIGRTLA+L TMTL TSMAARQG +AMAAHQIC+Q+WLAVSLLTDALASSGQA
Sbjct: 235 YMKSGGFLIGRTLAVLTTMTLATSMAARQGAVAMAAHQICMQIWLAVSLLTDALASSGQA 294

Query: 362 MIASSFSKGDYSTVKEIXXXXXXXXXXXXVSLAILLGGSFGSLATLFTQDTEVLGIVRSL 541
           +IAS  S+GD+ TVKE+            VSLA +LG SFGS+ATLFT+D +VLGIVR+ 
Sbjct: 295 LIASYSSEGDHKTVKEVTKFVLKIGLVVGVSLAAILGVSFGSIATLFTKDADVLGIVRTG 354

Query: 542 VLFVSASQPLNALAFIADGLYYGVSDFAYAARSMMVVGVVSSAFFLYASPIYGLSGVWWG 721
           +LFVSASQP+NALAFI DGL+YGVSDF YAA+SMM+VG++SSAF LYA PI GL GVW G
Sbjct: 355 ILFVSASQPINALAFIFDGLHYGVSDFPYAAKSMMLVGLISSAFLLYA-PITGLPGVWSG 413

Query: 722 LSLCMGLRTAAGYIRLMSKSGPWWFLHKD 808
           L+L MGLRTAAGY+RL+SKSGPWWF+HKD
Sbjct: 414 LALFMGLRTAAGYMRLLSKSGPWWFMHKD 442


>ref|XP_002278724.2| PREDICTED: MATE efflux family protein 3, chloroplastic-like [Vitis
            vinifera]
          Length = 601

 Score =  379 bits (972), Expect = e-103
 Identities = 190/275 (69%), Positives = 218/275 (79%)
 Frame = +2

Query: 2    GNLSSVVLLPMLMYSFHLGVTGAAIATVISQYIVTFLMIWSLNKRAILLPPKMENLHFGG 181
            GN ++V L P+LMY F LGVTGAAI+TV+SQYIVTFLMIW LNKRA+LLPPKM  L FG 
Sbjct: 319  GNFAAVFLFPILMYYFQLGVTGAAISTVVSQYIVTFLMIWHLNKRAVLLPPKMGTLQFGD 378

Query: 182  YLKSGGFLIGRTLAILVTMTLGTSMAARQGPLAMAAHQICLQVWLAVSLLTDALASSGQA 361
            Y+KSGGFL+GRTLA+L TMTL TS+AARQGP+AMA HQICLQVWLAVSLLTDALA+S QA
Sbjct: 379  YIKSGGFLLGRTLAVLATMTLATSVAARQGPIAMAGHQICLQVWLAVSLLTDALAASAQA 438

Query: 362  MIASSFSKGDYSTVKEIXXXXXXXXXXXXVSLAILLGGSFGSLATLFTQDTEVLGIVRSL 541
            MIASS SKGDY  VKEI            + LA+ L   +GSLAT+FT+D EVLGIVR+ 
Sbjct: 439  MIASSLSKGDYKAVKEITYFVLKTGLFTGIFLAVALSAFYGSLATIFTKDIEVLGIVRTG 498

Query: 542  VLFVSASQPLNALAFIADGLYYGVSDFAYAARSMMVVGVVSSAFFLYASPIYGLSGVWWG 721
            VLFV ASQP+N+LAFI DGL++G SDF YAARSMMV+G + SAF LY   + GL GVW G
Sbjct: 499  VLFVCASQPINSLAFIFDGLHFGASDFPYAARSMMVIGAICSAFLLYVPSLLGLQGVWLG 558

Query: 722  LSLCMGLRTAAGYIRLMSKSGPWWFLHKDLQRTEV 826
            L+L MGLR  AG IRL SK+GPWWFLH+D Q  EV
Sbjct: 559  LTLFMGLRMVAGVIRLASKTGPWWFLHEDFQMAEV 593


>emb|CBI37797.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  379 bits (972), Expect = e-103
 Identities = 190/275 (69%), Positives = 218/275 (79%)
 Frame = +2

Query: 2    GNLSSVVLLPMLMYSFHLGVTGAAIATVISQYIVTFLMIWSLNKRAILLPPKMENLHFGG 181
            GN ++V L P+LMY F LGVTGAAI+TV+SQYIVTFLMIW LNKRA+LLPPKM  L FG 
Sbjct: 322  GNFAAVFLFPILMYYFQLGVTGAAISTVVSQYIVTFLMIWHLNKRAVLLPPKMGTLQFGD 381

Query: 182  YLKSGGFLIGRTLAILVTMTLGTSMAARQGPLAMAAHQICLQVWLAVSLLTDALASSGQA 361
            Y+KSGGFL+GRTLA+L TMTL TS+AARQGP+AMA HQICLQVWLAVSLLTDALA+S QA
Sbjct: 382  YIKSGGFLLGRTLAVLATMTLATSVAARQGPIAMAGHQICLQVWLAVSLLTDALAASAQA 441

Query: 362  MIASSFSKGDYSTVKEIXXXXXXXXXXXXVSLAILLGGSFGSLATLFTQDTEVLGIVRSL 541
            MIASS SKGDY  VKEI            + LA+ L   +GSLAT+FT+D EVLGIVR+ 
Sbjct: 442  MIASSLSKGDYKAVKEITYFVLKTGLFTGIFLAVALSAFYGSLATIFTKDIEVLGIVRTG 501

Query: 542  VLFVSASQPLNALAFIADGLYYGVSDFAYAARSMMVVGVVSSAFFLYASPIYGLSGVWWG 721
            VLFV ASQP+N+LAFI DGL++G SDF YAARSMMV+G + SAF LY   + GL GVW G
Sbjct: 502  VLFVCASQPINSLAFIFDGLHFGASDFPYAARSMMVIGAICSAFLLYVPSLLGLQGVWLG 561

Query: 722  LSLCMGLRTAAGYIRLMSKSGPWWFLHKDLQRTEV 826
            L+L MGLR  AG IRL SK+GPWWFLH+D Q  EV
Sbjct: 562  LTLFMGLRMVAGVIRLASKTGPWWFLHEDFQMAEV 596


>ref|XP_003618104.1| Transporter, putative [Medicago truncatula]
            gi|355519439|gb|AET01063.1| Transporter, putative
            [Medicago truncatula]
          Length = 615

 Score =  378 bits (970), Expect = e-102
 Identities = 193/279 (69%), Positives = 222/279 (79%)
 Frame = +2

Query: 2    GNLSSVVLLPMLMYSFHLGVTGAAIATVISQYIVTFLMIWSLNKRAILLPPKMENLHFGG 181
            GNLS+V L P+LMY F LGV GAAI+TV+SQYI T LMIW LNKRA+LLPPKM NL FGG
Sbjct: 309  GNLSAVFLFPLLMYYFKLGVAGAAISTVLSQYIGTLLMIWCLNKRAVLLPPKMGNLQFGG 368

Query: 182  YLKSGGFLIGRTLAILVTMTLGTSMAARQGPLAMAAHQICLQVWLAVSLLTDALASSGQA 361
            Y+KSGGF++GRTLA+L TMTLGTSMAAR GP+AMAAHQIC+QVWLAVSLLTDALA SGQA
Sbjct: 369  YIKSGGFVLGRTLAVLTTMTLGTSMAARHGPVAMAAHQICMQVWLAVSLLTDALAVSGQA 428

Query: 362  MIASSFSKGDYSTVKEIXXXXXXXXXXXXVSLAILLGGSFGSLATLFTQDTEVLGIVRSL 541
            +IASS S+ +Y  VKEI            + L  +LG SFGSLATLFTQD EVL +VR+ 
Sbjct: 429  LIASSLSRHEYKAVKEITHFVLKIGLLTGICLTAILGASFGSLATLFTQDIEVLQVVRTG 488

Query: 542  VLFVSASQPLNALAFIADGLYYGVSDFAYAARSMMVVGVVSSAFFLYASPIYGLSGVWWG 721
            VLFVSASQPLNALA+I DGL+YGVSDF YAA SMM VG VSSAF +++   +GL GVW G
Sbjct: 489  VLFVSASQPLNALAYIFDGLHYGVSDFRYAAFSMMFVGAVSSAFLVFSPSHFGLRGVWLG 548

Query: 722  LSLCMGLRTAAGYIRLMSKSGPWWFLHKDLQRTEVGCWL 838
            L+L M LR  AG +RL+SK+GPWWFLHKD Q  EV  +L
Sbjct: 549  LTLFMALRVVAGSVRLLSKNGPWWFLHKDFQIAEVNGFL 587


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