BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015970
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   154   6e-36
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   140   1e-31
gb|ACU28477.1| At1g74580-like protein [Arabidopsis lyrata subsp....   137   1e-30
gb|ACU28476.1| At1g74580-like protein [Arabidopsis lyrata subsp....   137   1e-30

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  154 bits (390), Expect = 6e-36
 Identities = 73/95 (76%), Positives = 81/95 (85%)
 Frame = +1

Query: 1   VESKYFVQAHKVYLRMVAKGISPDVYTFTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNA 180
           VE +YF QAHKVY+RM  KGI PDVYTFTIR+KSFCRTSRPH A RLL NMPSQGC  +A
Sbjct: 122 VEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSA 181

Query: 181 VAYCTVIGGFYEEDHQIPASDLFNEMLGEGICPDI 285
           VAYCTVIGGFYEE+H++ A +LF EMLG GICPDI
Sbjct: 182 VAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDI 216


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/97 (72%), Positives = 80/97 (82%)
 Frame = +1

Query: 1   VESKYFVQAHKVYLRMVAKGISPDVYTFTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNA 180
           VES YF QAHKV+LRM   GI PDVYTFTIRIKSFCRT RPH ALRLL NM SQGC LNA
Sbjct: 122 VESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNA 181

Query: 181 VAYCTVIGGFYEEDHQIPASDLFNEMLGEGICPDITT 291
           VAYCTV+ GFYEE++++ A +LFN+ML  GI PD++T
Sbjct: 182 VAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVST 218


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/97 (72%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   VESKYFVQAHKVYLRMVAKGISPDVYTFTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNA 180
           VE  YF QAHKVYLRM  +GI+PDV TFTIRIKSFCRT RP  ALRLL NMPSQGC LNA
Sbjct: 122 VEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNA 181

Query: 181 VAYCTVIGGFYEEDHQIPASDLFNEMLGEGICPDITT 291
           V YCTVI GFYEE++Q+ A +LFN+ML  GI P I T
Sbjct: 182 VVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIAT 218


>gb|ACU28477.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
           gi|255685978|gb|ACU28478.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685980|gb|ACU28479.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685982|gb|ACU28480.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|255685984|gb|ACU28481.1| At1g74580-like protein
           [Arabidopsis lyrata subsp. petraea]
          Length = 171

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/97 (64%), Positives = 79/97 (81%)
 Frame = +1

Query: 1   VESKYFVQAHKVYLRMVAKGISPDVYTFTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNA 180
           V+S YF QAHKVY+RM  +GI+PDVY+FTIR+KSFCRTSRPH ALRLL NM SQGC +N 
Sbjct: 48  VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNV 107

Query: 181 VAYCTVIGGFYEEDHQIPASDLFNEMLGEGICPDITT 291
           VAYCTV+GGFYEE+ ++ A +LF +ML  G+   ++T
Sbjct: 108 VAYCTVVGGFYEENFKVEAYELFGKMLASGVSLCLST 144


>gb|ACU28476.1| At1g74580-like protein [Arabidopsis lyrata subsp. petraea]
          Length = 171

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/97 (64%), Positives = 79/97 (81%)
 Frame = +1

Query: 1   VESKYFVQAHKVYLRMVAKGISPDVYTFTIRIKSFCRTSRPHVALRLLRNMPSQGCMLNA 180
           V+S YF QAHKVY+RM  +GI+PDVY+FTIR+KSFCRTSRPH ALRLL NM SQGC +N 
Sbjct: 48  VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNV 107

Query: 181 VAYCTVIGGFYEEDHQIPASDLFNEMLGEGICPDITT 291
           VAYCTV+GGFYEE+ ++ A +LF +ML  G+   ++T
Sbjct: 108 VAYCTVVGGFYEENFKVEAYELFGKMLASGVSLCLST 144