BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015969
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subun...   625   e-177
emb|CBI34928.3| unnamed protein product [Vitis vinifera]              608   e-171
ref|XP_002517336.1| protein farnesyltransferase beta subunit, pu...   598   e-168
ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subun...   582   e-164
ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subun...   577   e-162

>ref|XP_002278403.1| PREDICTED: protein farnesyltransferase subunit beta-like isoform 1
            [Vitis vinifera]
          Length = 438

 Score =  625 bits (1613), Expect = e-177
 Identities = 300/433 (69%), Positives = 358/433 (82%), Gaps = 4/433 (0%)
 Frame = +2

Query: 17   TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 196
            T+TQREQWMVES+V ++Y+L SS P +AQ+++L++QRD+H+E+L  GL+QLGPSFCVLDA
Sbjct: 10   TVTQREQWMVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGLRQLGPSFCVLDA 69

Query: 197  NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 376
            NRPWLCYWILHS+ALLG+SVD +LEN  +DFLS CQD +        QMPHLATTYAA+N
Sbjct: 70   NRPWLCYWILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLATTYAAIN 129

Query: 377  SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 556
            +L+TLGG R+LSSINR K++ FL  MKD SG FRMH+AGEMDVRACYTAISVAS+L ILD
Sbjct: 130  ALITLGGHRSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVASVLTILD 189

Query: 557  DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 736
            DELV+ VGNFIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL SL+DWVV
Sbjct: 190  DELVKGVGNFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTSLIDWVV 249

Query: 737  FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVG 916
            FRQGVE GFQGR NKLVDGCYSFWQGGVFALIQ+L S+  + L+L    G    S Q   
Sbjct: 250  FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAIDSPQ--- 306

Query: 917  SFNVSDLEEGSGSLNTYDKN----YSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQE 1084
               ++ +   SG    +D +    +S+IGF+++K PAE  PLFHSIALQQYI+LCSQ+QE
Sbjct: 307  ---LASISCHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQE 363

Query: 1085 GGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYNI 1264
            GGF+DKPGK RDYYHTCYCLSGLSV Q+ +SKDADS P P+AVFGPYSNLLEPIHPLYN+
Sbjct: 364  GGFRDKPGKHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNV 423

Query: 1265 MLDRYYKAHDFFS 1303
            +LD Y++AH+FFS
Sbjct: 424  ILDLYHEAHEFFS 436


>emb|CBI34928.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score =  608 bits (1569), Expect = e-171
 Identities = 293/425 (68%), Positives = 350/425 (82%), Gaps = 4/425 (0%)
 Frame = +2

Query: 41   MVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDANRPWLCYW 220
            MVES+V ++Y+L SS P +AQ+++L++QRD+H+E+L  GL+QLGPSFCVLDANRPWLCYW
Sbjct: 1    MVESQVFQMYELLSSVPRNAQSVLLELQRDKHIEFLTNGLRQLGPSFCVLDANRPWLCYW 60

Query: 221  ILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVNSLLTLGGE 400
            ILHS+ALLG+SVD +LEN  +DFLS CQD +        QMPHLATTYAA+N+L+TLGG 
Sbjct: 61   ILHSIALLGDSVDDELENNTIDFLSRCQDPNGGYGGGPGQMPHLATTYAAINALITLGGH 120

Query: 401  RALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILDDELVQNVG 580
            R+LSSINR K++ FL  MKD SG FRMH+AGEMDVRACYTAISVAS+L ILDDELV+ VG
Sbjct: 121  RSLSSINRGKVYTFLRRMKDPSGAFRMHDAGEMDVRACYTAISVASVLTILDDELVKGVG 180

Query: 581  NFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVVFRQGVECG 760
            NFIL CQTYEGGI+GEPGSEAHGGYTFCGLATM+LI E +RLDL SL+DWVVFRQGVE G
Sbjct: 181  NFILSCQTYEGGISGEPGSEAHGGYTFCGLATMVLIGEVNRLDLTSLIDWVVFRQGVEGG 240

Query: 761  FQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVGSFNVSDLE 940
            FQGR NKLVDGCYSFWQGGVFALIQ+L S+  + L+L    G    S Q      ++ + 
Sbjct: 241  FQGRTNKLVDGCYSFWQGGVFALIQKLHSIIEEQLRLLDAGGSAIDSPQ------LASIS 294

Query: 941  EGSGSLNTYDKN----YSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQEGGFKDKPG 1108
              SG    +D +    +S+IGF+++K PAE  PLFHSIALQQYI+LCSQ+QEGGF+DKPG
Sbjct: 295  CHSGKRGLHDTSGSAKFSNIGFNFLKEPAEMEPLFHSIALQQYIILCSQLQEGGFRDKPG 354

Query: 1109 KSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYNIMLDRYYKA 1288
            K RDYYHTCYCLSGLSV Q+ +SKDADS P P+AVFGPYSNLLEPIHPLYN++LD Y++A
Sbjct: 355  KHRDYYHTCYCLSGLSVAQYSYSKDADSPPLPRAVFGPYSNLLEPIHPLYNVILDLYHEA 414

Query: 1289 HDFFS 1303
            H+FFS
Sbjct: 415  HEFFS 419


>ref|XP_002517336.1| protein farnesyltransferase beta subunit, putative [Ricinus communis]
            gi|223543347|gb|EEF44878.1| protein farnesyltransferase
            beta subunit, putative [Ricinus communis]
          Length = 438

 Score =  598 bits (1541), Expect = e-168
 Identities = 295/439 (67%), Positives = 349/439 (79%), Gaps = 5/439 (1%)
 Frame = +2

Query: 2    SNSRVTITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSF 181
            S  R T +Q EQW+V+ +V +IY +F++ PH AQTLML++QRD+HMEYL +GLKQL  SF
Sbjct: 8    SRRRATASQHEQWIVQDQVFQIYDIFANIPHKAQTLMLELQRDKHMEYLTRGLKQLSSSF 67

Query: 182  CVLDANRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATT 361
            CVLDANRPWLCYWILHS+ALLGES+D +LEN A+DFL+ CQD +        Q+PHLATT
Sbjct: 68   CVLDANRPWLCYWILHSIALLGESIDYELENNAIDFLNRCQDPNGGFGGGPGQLPHLATT 127

Query: 362  YAAVNSLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISV-AS 538
            YAAVNSL+TLGG RALSSINR KL+ FL  MKD SG FRMH+AGE+DVRACYTAISV A+
Sbjct: 128  YAAVNSLVTLGGPRALSSINRGKLYTFLRRMKDPSGPFRMHDAGEIDVRACYTAISVCAN 187

Query: 539  ILNILDDELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPS 718
            ILNILDDELV++VGN+IL CQTYEGGIAGEPGSEAHGGYTFCGLATMILI+E +RLDL S
Sbjct: 188  ILNILDDELVRDVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLATMILINEVNRLDLSS 247

Query: 719  LLDWVVFRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLN---VGEGE 889
            L++WVVFRQGVECGFQGR NKLVDGCYSFWQGGVFAL+QRL S+ G+H   +    G   
Sbjct: 248  LINWVVFRQGVECGFQGRTNKLVDGCYSFWQGGVFALLQRLRSIGGEHAAFSDAEAGHCA 307

Query: 890  TRGSTQNVGSFNVS-DLEEGSGSLNTYDKNYSDIGFSYIKRPAESGPLFHSIALQQYILL 1066
            T  S+++ G+   S D++E          ++   G         + PLFHS ALQQYI+L
Sbjct: 308  TESSSEDEGTDGDSTDVDEPG--------HFKQGGHGV------TVPLFHSSALQQYIIL 353

Query: 1067 CSQVQEGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPI 1246
            CSQ QEGGF+DKPGK+RDYYHTCYCLSGLSVCQ+ WSKD +S P P+AV GPYSNLLEPI
Sbjct: 354  CSQEQEGGFRDKPGKARDYYHTCYCLSGLSVCQYSWSKDENSPPLPRAVLGPYSNLLEPI 413

Query: 1247 HPLYNIMLDRYYKAHDFFS 1303
            HPLYN++  +Y  AH+FFS
Sbjct: 414  HPLYNVVSKQYDGAHEFFS 432


>ref|XP_003542689.1| PREDICTED: protein farnesyltransferase subunit beta [Glycine max]
          Length = 455

 Score =  582 bits (1501), Expect = e-164
 Identities = 276/433 (63%), Positives = 339/433 (78%), Gaps = 5/433 (1%)
 Frame = +2

Query: 17   TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 196
            T++QREQWMVES+V +IYQLF++ P +AQTLML++QRD HM+Y++KGL+ L  +F VLDA
Sbjct: 19   TVSQREQWMVESQVFQIYQLFATIPRNAQTLMLELQRDNHMQYVSKGLRHLSSAFSVLDA 78

Query: 197  NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 376
            NRPWLCYWI HS+AL GESVD +LE+ A+DFL+ CQD +        QMPH+ATTYAAVN
Sbjct: 79   NRPWLCYWIFHSIALSGESVDDELEDNAIDFLNRCQDPNGGYAGGPGQMPHIATTYAAVN 138

Query: 377  SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 556
            SL+TLGGE++L+SINR+KL+ FL  MK  +GGFRMH+ GE+DVRACYTAISVAS+LNILD
Sbjct: 139  SLITLGGEKSLASINRDKLYGFLRRMKQPNGGFRMHDEGEIDVRACYTAISVASVLNILD 198

Query: 557  DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 736
            DEL+QNVG++I+ CQTYEGGIAGEPGSEAHGGYTFCGLATMILI E + LDLP L+DWVV
Sbjct: 199  DELIQNVGDYIISCQTYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNHLDLPRLVDWVV 258

Query: 737  FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLK-----LNVGEGETRGS 901
            FRQG ECGFQGR NKLVDGCYSFWQGG  AL+QRL S+  + ++       V        
Sbjct: 259  FRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIINKQMEETSQIFAVSYVSEAKE 318

Query: 902  TQNVGSFNVSDLEEGSGSLNTYDKNYSDIGFSYIKRPAESGPLFHSIALQQYILLCSQVQ 1081
            + +  S + +   E  G+  +   ++ +I + +I       PLFHSIALQQYILLC+Q Q
Sbjct: 319  SLDGTSSHATCRGEHEGTSESSSSDFKNIAYKFINEWRAQEPLFHSIALQQYILLCAQEQ 378

Query: 1082 EGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPYSNLLEPIHPLYN 1261
            EGG +DKPGK RD+YHTCYCLSGLS+CQ+ WSK  DS P P  V GPYSNLLEPIHPL+N
Sbjct: 379  EGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPYSNLLEPIHPLFN 438

Query: 1262 IMLDRYYKAHDFF 1300
            ++L RY +AH+FF
Sbjct: 439  VVLGRYREAHEFF 451


>ref|XP_003527032.1| PREDICTED: protein farnesyltransferase subunit beta-like [Glycine
            max]
          Length = 455

 Score =  577 bits (1486), Expect = e-162
 Identities = 275/445 (61%), Positives = 339/445 (76%), Gaps = 17/445 (3%)
 Frame = +2

Query: 17   TITQREQWMVESKVSEIYQLFSSFPHHAQTLMLDVQRDEHMEYLNKGLKQLGPSFCVLDA 196
            T++QR+QWMVES+V +IYQLF++ P  AQ LML++QRD HM+YL+KGL+ L  +F VLDA
Sbjct: 19   TVSQRDQWMVESQVFQIYQLFATIPGSAQNLMLELQRDNHMQYLSKGLRHLSSAFSVLDA 78

Query: 197  NRPWLCYWILHSMALLGESVDCDLENGAVDFLSCCQDSHXXXXXXXXQMPHLATTYAAVN 376
            NRPWLCYWI HS+ALLGESVD +LE+  +DFL+ CQD +        QMPH+ATTYAAVN
Sbjct: 79   NRPWLCYWIFHSIALLGESVDDELEDNTIDFLNRCQDPNGGYAGGPGQMPHIATTYAAVN 138

Query: 377  SLLTLGGERALSSINREKLHKFLLHMKDQSGGFRMHNAGEMDVRACYTAISVASILNILD 556
            +L+TLGG+++L+SINR+KL+ FL  MK  +GGFRMH+ GE+DVRACYTAISVAS+LNILD
Sbjct: 139  TLITLGGQKSLASINRDKLYGFLRRMKQSNGGFRMHDEGEIDVRACYTAISVASVLNILD 198

Query: 557  DELVQNVGNFILRCQTYEGGIAGEPGSEAHGGYTFCGLATMILIDEADRLDLPSLLDWVV 736
            DEL++NVG++IL CQTYEGGIAGEPGSEAHGGYTFCGLATMILI E +RLDLP L++W V
Sbjct: 199  DELIKNVGDYILSCQTYEGGIAGEPGSEAHGGYTFCGLATMILIGEVNRLDLPRLVEWAV 258

Query: 737  FRQGVECGFQGRANKLVDGCYSFWQGGVFALIQRLPSVAGQHLKLNVGEGETRGSTQNVG 916
            FRQG ECGFQGR NKLVDGCYSFWQGG  AL+QRL S+  + ++            +   
Sbjct: 259  FRQGKECGFQGRTNKLVDGCYSFWQGGAVALLQRLSSIINKQME------------EASQ 306

Query: 917  SFNVSDLEEGSGSLN-----------------TYDKNYSDIGFSYIKRPAESGPLFHSIA 1045
            +F +SD+ E   SL+                 +   +Y  IG+++I       PLFHSIA
Sbjct: 307  TFTISDVSEAKESLDGTSSHATCHGKHEGTSQSCSADYKSIGYNFINEWRAQEPLFHSIA 366

Query: 1046 LQQYILLCSQVQEGGFKDKPGKSRDYYHTCYCLSGLSVCQHCWSKDADSSPFPKAVFGPY 1225
            LQQYILLC+Q Q GG +DKPGK RD+YHTCYCLSGLS+CQ+ WSK  DS P P  V GPY
Sbjct: 367  LQQYILLCAQEQAGGLRDKPGKRRDHYHTCYCLSGLSLCQYSWSKHPDSPPLPNLVLGPY 426

Query: 1226 SNLLEPIHPLYNIMLDRYYKAHDFF 1300
            SNLLEPIHPL+N++L+RY +AH FF
Sbjct: 427  SNLLEPIHPLFNVVLERYREAHVFF 451