BLASTX nr result

ID: Coptis24_contig00015961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015961
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72399.1| hypothetical protein VITISV_041203 [Vitis vinifera]   194   1e-47
emb|CBI16573.3| unnamed protein product [Vitis vinifera]              191   9e-47
ref|XP_002285774.1| PREDICTED: uncharacterized protein LOC100262...   191   9e-47
ref|XP_002523386.1| conserved hypothetical protein [Ricinus comm...   186   3e-45
ref|XP_002299090.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40

>emb|CAN72399.1| hypothetical protein VITISV_041203 [Vitis vinifera]
          Length = 315

 Score =  194 bits (494), Expect = 1e-47
 Identities = 103/194 (53%), Positives = 128/194 (65%), Gaps = 6/194 (3%)
 Frame = +2

Query: 134 TAPAFLWSTQDGINDSGVDYRTISRNDLPKLILSQGGWSSLLCPGEDLHNHLDIGLVFIA 313
           T PAFLWS         V+Y+T+S  DL K ++S+GGWS+LLC GE     +D+ LVF+ 
Sbjct: 27  TVPAFLWSHHQXEMKEAVNYQTLSPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 86

Query: 314 RQLQS------SHIDPALSHLLKGPFTRSNFSMAFPYVSPSEDDKTMETSLISGFTETCG 475
           R+L S       H DPAL  LLK  F RSNFSMAFPYV+ SE+ + ME SLISGFTETCG
Sbjct: 87  RELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISGFTETCG 146

Query: 476 HDFGVDNIAFLESCSVDGANFPKLADMQAVHGYLTSVLKNKQNRKKHLIVLCNGGSASSQ 655
           HD GV N+AFLESCSV+G NF KLAD+ +VH YL S  K +      L++ C+GGS   +
Sbjct: 147 HDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE 206

Query: 656 GLDPSWSEGDIFSE 697
            LD    E ++FSE
Sbjct: 207 -LDQR-LESEVFSE 218


>emb|CBI16573.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  191 bits (486), Expect = 9e-47
 Identities = 102/194 (52%), Positives = 127/194 (65%), Gaps = 6/194 (3%)
 Frame = +2

Query: 134 TAPAFLWSTQDGINDSGVDYRTISRNDLPKLILSQGGWSSLLCPGEDLHNHLDIGLVFIA 313
           T PAFLWS         V+Y+T+   DL K ++S+GGWS+LLC GE     +D+ LVF+ 
Sbjct: 60  TVPAFLWSHHQFEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 119

Query: 314 RQLQS------SHIDPALSHLLKGPFTRSNFSMAFPYVSPSEDDKTMETSLISGFTETCG 475
           R+L S       H DPAL  LLK  F RSNFSMAFPYV+ SE+ + ME SLISGFTETCG
Sbjct: 120 RELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISGFTETCG 179

Query: 476 HDFGVDNIAFLESCSVDGANFPKLADMQAVHGYLTSVLKNKQNRKKHLIVLCNGGSASSQ 655
           HD GV N+AFLESCSV+G NF KLAD+ +VH YL S  K +      L++ C+GGS   +
Sbjct: 180 HDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE 239

Query: 656 GLDPSWSEGDIFSE 697
            LD    E ++FSE
Sbjct: 240 -LDQR-LESEVFSE 251


>ref|XP_002285774.1| PREDICTED: uncharacterized protein LOC100262157 [Vitis vinifera]
          Length = 315

 Score =  191 bits (486), Expect = 9e-47
 Identities = 102/194 (52%), Positives = 127/194 (65%), Gaps = 6/194 (3%)
 Frame = +2

Query: 134 TAPAFLWSTQDGINDSGVDYRTISRNDLPKLILSQGGWSSLLCPGEDLHNHLDIGLVFIA 313
           T PAFLWS         V+Y+T+   DL K ++S+GGWS+LLC GE     +D+ LVF+ 
Sbjct: 27  TVPAFLWSHHQFEMKEAVNYQTLYPKDLAKSVVSEGGWSNLLCSGEKDQQPVDLALVFVG 86

Query: 314 RQLQS------SHIDPALSHLLKGPFTRSNFSMAFPYVSPSEDDKTMETSLISGFTETCG 475
           R+L S       H DPAL  LLK  F RSNFSMAFPYV+ SE+ + ME SLISGFTETCG
Sbjct: 87  RELSSLDISGSKHADPALVDLLKVSFARSNFSMAFPYVAVSEEKEAMENSLISGFTETCG 146

Query: 476 HDFGVDNIAFLESCSVDGANFPKLADMQAVHGYLTSVLKNKQNRKKHLIVLCNGGSASSQ 655
           HD GV N+AFLESCSV+G NF KLAD+ +VH YL S  K +      L++ C+GGS   +
Sbjct: 147 HDLGVSNVAFLESCSVEGGNFKKLADLHSVHDYLVSRRKMRPVGPTDLVMFCHGGSHLEE 206

Query: 656 GLDPSWSEGDIFSE 697
            LD    E ++FSE
Sbjct: 207 -LDQR-LESEVFSE 218


>ref|XP_002523386.1| conserved hypothetical protein [Ricinus communis]
           gi|223537336|gb|EEF38965.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 318

 Score =  186 bits (473), Expect = 3e-45
 Identities = 98/197 (49%), Positives = 136/197 (69%), Gaps = 9/197 (4%)
 Frame = +2

Query: 134 TAPAFLWSTQDGIN---DSGVDYRTISRNDLPKLILSQGGWSSLLCPGEDLHNHLDIGLV 304
           + PAF WS+    N   D  V+Y+TIS  DL + ILS+GGWS++LC  + L   +D+ LV
Sbjct: 28  SVPAFFWSSHQFSNNGMDEAVNYQTISSRDLARSILSEGGWSNILCSEKKLQQPVDLALV 87

Query: 305 FIARQLQSSHI------DPALSHLLKGPFTRSNFSMAFPYVSPSEDDKTMETSLISGFTE 466
           F+ R+L S+ I      DPAL  LLK  + RSNFSMAFPY++ SE++ TME SL+SGF E
Sbjct: 88  FVGRELLSTDISTRKSADPALVSLLKVLYGRSNFSMAFPYIAASEEE-TMENSLVSGFVE 146

Query: 467 TCGHDFGVDNIAFLESCSVDGANFPKLADMQAVHGYLTSVLKNKQNRKKHLIVLCNGGSA 646
           +CG D G++N+AF ESCSV+G NF KLAD+ AVH +L S ++ +QN +  L+V C+ G+ 
Sbjct: 147 SCGQDLGINNVAFSESCSVEGENFEKLADVHAVHDHLVSRMEKRQNGQADLVVFCH-GAH 205

Query: 647 SSQGLDPSWSEGDIFSE 697
           S++GL+   SE +I SE
Sbjct: 206 SAKGLEQPKSESEILSE 222


>ref|XP_002299090.1| predicted protein [Populus trichocarpa] gi|222846348|gb|EEE83895.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  171 bits (434), Expect = 1e-40
 Identities = 95/199 (47%), Positives = 127/199 (63%), Gaps = 8/199 (4%)
 Frame = +2

Query: 125 TSITAPAFLWSTQDGINDSG--VDYRTISRNDLPKLILSQGGWSSLLCPGEDLHNHLDIG 298
           +S T PAFLWS     +     V+Y+TIS  DL + +LS+GGWS+LLC  + +   +D+ 
Sbjct: 28  SSTTVPAFLWSPHHPHHQMSEVVNYQTISSKDLARSVLSEGGWSNLLCSEKKVQQSVDLA 87

Query: 299 LVFIARQLQSSHI------DPALSHLLKGPFTRSNFSMAFPYVSPSEDDKTMETSLISGF 460
           LVFI R L S+ +      DPAL +LLK     SNFSMAF YV+ SE+   ME SL+SGF
Sbjct: 88  LVFIGRGLLSTDVSANKNTDPALVNLLK-----SNFSMAFSYVAASEE--AMENSLVSGF 140

Query: 461 TETCGHDFGVDNIAFLESCSVDGANFPKLADMQAVHGYLTSVLKNKQNRKKHLIVLCNGG 640
            E CG D  + N+AF ESCSV+G NF KLA++ A++ YL S ++ + +    L+V C GG
Sbjct: 141 AEACGQDLEISNVAFSESCSVEGENFQKLANLHAINDYLASRMEKRPSGHTDLVVFCYGG 200

Query: 641 SASSQGLDPSWSEGDIFSE 697
           S S +GLD   SE +IFSE
Sbjct: 201 SNSMKGLDQPQSESEIFSE 219


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