BLASTX nr result

ID: Coptis24_contig00015956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015956
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240244.1| uncharacterized protein LOC100813682 [Glycin...    63   3e-08
gb|AFK38348.1| unknown [Lotus japonicus]                               62   4e-08
gb|AFK33634.1| unknown [Lotus japonicus]                               62   4e-08
ref|XP_003606006.1| Maturase K [Medicago truncatula] gi|35550706...    62   5e-08
ref|XP_003606004.1| Quinone oxidoreductase PIG3 [Medicago trunca...    62   5e-08

>ref|NP_001240244.1| uncharacterized protein LOC100813682 [Glycine max]
           gi|255642907|gb|ACU22674.1| unknown [Glycine max]
          Length = 325

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = +3

Query: 54  WPAVAEGKVKPIVYKSFPLSKAAESHQLMES 146
           WPA+AEGKVKP+VYKSFPLS+AAE+HQLMES
Sbjct: 284 WPAIAEGKVKPVVYKSFPLSEAAEAHQLMES 314


>gb|AFK38348.1| unknown [Lotus japonicus]
          Length = 325

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +3

Query: 54  WPAVAEGKVKPIVYKSFPLSKAAESHQLMES 146
           WPA+AEGKVKP++YKSFPLS+AAE+HQLMES
Sbjct: 284 WPAIAEGKVKPVIYKSFPLSEAAEAHQLMES 314


>gb|AFK33634.1| unknown [Lotus japonicus]
          Length = 110

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/31 (83%), Positives = 31/31 (100%)
 Frame = +3

Query: 54  WPAVAEGKVKPIVYKSFPLSKAAESHQLMES 146
           WPA+AEGKVKP++YKSFPLS+AAE+HQLMES
Sbjct: 69  WPAIAEGKVKPVIYKSFPLSEAAEAHQLMES 99


>ref|XP_003606006.1| Maturase K [Medicago truncatula] gi|355507061|gb|AES88203.1|
           Maturase K [Medicago truncatula]
          Length = 855

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = +3

Query: 3   RSPXXXXXXXXXXXXXXWPAVAEGKVKPIVYKSFPLSKAAESHQLMES 146
           RSP              WPA+AEGKVKP+VYKSFPLS+AAE+H+LMES
Sbjct: 267 RSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSFPLSEAAEAHRLMES 314


>ref|XP_003606004.1| Quinone oxidoreductase PIG3 [Medicago truncatula]
           gi|355507059|gb|AES88201.1| Quinone oxidoreductase PIG3
           [Medicago truncatula]
          Length = 248

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = +3

Query: 3   RSPXXXXXXXXXXXXXXWPAVAEGKVKPIVYKSFPLSKAAESHQLMES 146
           RSP              WPA+AEGKVKP+VYKSFPLS+AAE+H+LMES
Sbjct: 190 RSPENKAVIVAEVEKNVWPAIAEGKVKPVVYKSFPLSEAAEAHRLMES 237


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