BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015954
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   242   4e-62
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   242   4e-62
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         236   3e-60
ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar...   218   6e-55

>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  242 bits (617), Expect = 4e-62
 Identities = 109/153 (71%), Positives = 138/153 (90%)
 Frame = -3

Query: 582 DNAEKMREVMKKNKVRKNRGLSWIEIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLG 403
           D+AE++RE+MK++ VRKNRG SW+E+GG+IHQFKAGD SHPE+  IY++LEGLI+RTKL 
Sbjct: 371 DSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLE 430

Query: 402 GFVPAVELVFLDVSEEEKEANLSNHSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWM 223
           GF+PA +LV +DVS+EE+E NL++HSEKLALAY ILKTS GTEIR+SKNLRTC+DCH WM
Sbjct: 431 GFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWM 490

Query: 222 KMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 124
           K++SR+L+RVI++RDRIRFH+FE G CSC DYW
Sbjct: 491 KILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  242 bits (617), Expect = 4e-62
 Identities = 109/153 (71%), Positives = 138/153 (90%)
 Frame = -3

Query: 582 DNAEKMREVMKKNKVRKNRGLSWIEIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLG 403
           D+AE++RE+MK++ VRKNRG SW+E+GG+IHQFKAGD SHPE+  IY++LEGLI+RTKL 
Sbjct: 410 DSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLE 469

Query: 402 GFVPAVELVFLDVSEEEKEANLSNHSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWM 223
           GF+PA +LV +DVS+EE+E NL++HSEKLALAY ILKTS GTEIR+SKNLRTC+DCH WM
Sbjct: 470 GFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWM 529

Query: 222 KMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 124
           K++SR+L+RVI++RDRIRFH+FE G CSC DYW
Sbjct: 530 KILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562


>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  236 bits (601), Expect = 3e-60
 Identities = 109/153 (71%), Positives = 132/153 (86%)
 Frame = -3

Query: 582 DNAEKMREVMKKNKVRKNRGLSWIEIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLG 403
           DNA+++RE+MK+  VRK RG SW E   ++H+F+AGD SHPE+E +Y++LEGLI+RTKL 
Sbjct: 362 DNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLE 421

Query: 402 GFVPAVELVFLDVSEEEKEANLSNHSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWM 223
           GFVP+ ELV +DVSEEEKE NL +HSEKLALAYGILKTS GTEIRI KNLR CYDCH+W+
Sbjct: 422 GFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWI 481

Query: 222 KMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 124
           KMVS +L+RVI++RDRIRFHRFE GSCSC DYW
Sbjct: 482 KMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514


>ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  223 bits (568), Expect = 2e-56
 Identities = 105/153 (68%), Positives = 126/153 (82%)
 Frame = -3

Query: 582 DNAEKMREVMKKNKVRKNRGLSWIEIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLG 403
           D A+ + E+MKK  V K RG S  E  G +H FKAGD SHPE+E IY++LEGLI+RTKL 
Sbjct: 359 DTAQGVWEMMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLA 418

Query: 402 GFVPAVELVFLDVSEEEKEANLSNHSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWM 223
           G+VP  +LV +DVSEEEKE NL +HSEKLALAYGILKT+ G E+RISKNLR CYDCHSW+
Sbjct: 419 GYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWI 478

Query: 222 KMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 124
           K+VSR+L+RVI++RDRIRFHRFE+G CSC DYW
Sbjct: 479 KIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511


>ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score =  218 bits (555), Expect = 6e-55
 Identities = 101/153 (66%), Positives = 127/153 (83%)
 Frame = -3

Query: 582 DNAEKMREVMKKNKVRKNRGLSWIEIGGIIHQFKAGDWSHPESETIYRLLEGLIKRTKLG 403
           ++A+K+RE+M K  +RK +G SW+E GG+IH+FKAGD SH E++ IY++LEGLI++TK  
Sbjct: 382 ESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQ 441

Query: 402 GFVPAVELVFLDVSEEEKEANLSNHSEKLALAYGILKTSLGTEIRISKNLRTCYDCHSWM 223
           GFV   +LV +DVSEEEKE NL+ HSEKLALAY ILK+S GTEIRI KN+R C DCH+W+
Sbjct: 442 GFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWI 501

Query: 222 KMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 124
           K VS++LNRVI+MRDRIRFHRFE G CSC DYW
Sbjct: 502 KAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534