BLASTX nr result

ID: Coptis24_contig00015945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015945
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39248.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002281996.1| PREDICTED: protein AIG1 [Vitis vinifera]          145   3e-33
emb|CAN68778.1| hypothetical protein VITISV_037325 [Vitis vinifera]   145   3e-33
ref|XP_002325957.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002510771.1| aig1, putative [Ricinus communis] gi|2235514...   138   5e-31

>emb|CBI39248.3| unnamed protein product [Vitis vinifera]
          Length = 345

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/78 (91%), Positives = 76/78 (97%)
 Frame = +1

Query: 1   MGGSTIDDDWELTAPSSDVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 180
           MGGS+IDD+WE TAPSS VRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL
Sbjct: 6   MGGSSIDDEWEFTAPSSGVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 65

Query: 181 QRSVLRDGQILNVIDTPG 234
           QR++LRDGQI+NVIDTPG
Sbjct: 66  QRTILRDGQIVNVIDTPG 83


>ref|XP_002281996.1| PREDICTED: protein AIG1 [Vitis vinifera]
          Length = 340

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/78 (91%), Positives = 76/78 (97%)
 Frame = +1

Query: 1   MGGSTIDDDWELTAPSSDVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 180
           MGGS+IDD+WE TAPSS VRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL
Sbjct: 1   MGGSSIDDEWEFTAPSSGVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 60

Query: 181 QRSVLRDGQILNVIDTPG 234
           QR++LRDGQI+NVIDTPG
Sbjct: 61  QRTILRDGQIVNVIDTPG 78


>emb|CAN68778.1| hypothetical protein VITISV_037325 [Vitis vinifera]
          Length = 566

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/78 (91%), Positives = 76/78 (97%)
 Frame = +1

Query: 1   MGGSTIDDDWELTAPSSDVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 180
           MGGS+IDD+WE TAPSS VRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL
Sbjct: 1   MGGSSIDDEWEFTAPSSGVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 60

Query: 181 QRSVLRDGQILNVIDTPG 234
           QR++LRDGQI+NVIDTPG
Sbjct: 61  QRTILRDGQIVNVIDTPG 78


>ref|XP_002325957.1| predicted protein [Populus trichocarpa] gi|222862832|gb|EEF00339.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/78 (84%), Positives = 74/78 (94%)
 Frame = +1

Query: 1   MGGSTIDDDWELTAPSSDVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 180
           MGGS +DDDWE  +PS+ VRT+VLVGRTGNGKSATGNSILGRK+FKSRASSSGVTS+CEL
Sbjct: 1   MGGSAMDDDWEFASPSNGVRTIVLVGRTGNGKSATGNSILGRKAFKSRASSSGVTSSCEL 60

Query: 181 QRSVLRDGQILNVIDTPG 234
           QR+VLRDGQI+NVIDTPG
Sbjct: 61  QRTVLRDGQIINVIDTPG 78


>ref|XP_002510771.1| aig1, putative [Ricinus communis] gi|223551472|gb|EEF52958.1| aig1,
           putative [Ricinus communis]
          Length = 339

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/78 (82%), Positives = 75/78 (96%)
 Frame = +1

Query: 1   MGGSTIDDDWELTAPSSDVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCEL 180
           MGGS IDDDWELT+PS+ VRT+VLVGRTGNGKSATGNS+LGRK+FKSRASSSGVTSTCEL
Sbjct: 1   MGGSAIDDDWELTSPSNGVRTVVLVGRTGNGKSATGNSLLGRKAFKSRASSSGVTSTCEL 60

Query: 181 QRSVLRDGQILNVIDTPG 234
           Q++V+ DGQ++NV+DTPG
Sbjct: 61  QQTVITDGQVINVVDTPG 78


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