BLASTX nr result

ID: Coptis24_contig00015939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015939
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246...    55   5e-06
emb|CBI16489.3| unnamed protein product [Vitis vinifera]               55   5e-06

>ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246694 [Vitis vinifera]
          Length = 866

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
 Frame = +3

Query: 21  PSQPLLTAP-----SGQPPYRPL----ASSAWSGSTVPTPAQ--PVDLFQR----LPLVS 155
           PS PLL        SG  P RP+    +S+ W    + TPA   P  + Q     +P V 
Sbjct: 435 PSMPLLPQSVPNLLSGPLPDRPITPAGSSTGWPRVPLGTPASLGPNQMVQMTTSMVPGVP 494

Query: 156 QPLMASVTASSNATGNISRGPSGNMVVPASFPSRPSTAQLPNTPVNHTVTGPNFSFV 326
           +P++ASV   SN +       + NMV P +F SRPS  QLP+T  N  +T P F+ V
Sbjct: 495 RPVVASVAPPSNIS-------AANMVSPVTFSSRPSAPQLPSTQQNRPLTPPTFASV 544


>emb|CBI16489.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
 Frame = +3

Query: 21  PSQPLLTAP-----SGQPPYRPL----ASSAWSGSTVPTPAQ--PVDLFQR----LPLVS 155
           PS PLL        SG  P RP+    +S+ W    + TPA   P  + Q     +P V 
Sbjct: 455 PSMPLLPQSVPNLLSGPLPDRPITPAGSSTGWPRVPLGTPASLGPNQMVQMTTSMVPGVP 514

Query: 156 QPLMASVTASSNATGNISRGPSGNMVVPASFPSRPSTAQLPNTPVNHTVTGPNFSFV 326
           +P++ASV   SN +       + NMV P +F SRPS  QLP+T  N  +T P F+ V
Sbjct: 515 RPVVASVAPPSNIS-------AANMVSPVTFSSRPSAPQLPSTQQNRPLTPPTFASV 564


Top