BLASTX nr result

ID: Coptis24_contig00015937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015937
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32359.3| unnamed protein product [Vitis vinifera]              357   2e-96
emb|CAN83384.1| hypothetical protein VITISV_018232 [Vitis vinifera]   357   3e-96
gb|ABK96006.1| unknown [Populus trichocarpa]                          314   2e-83
ref|XP_002332498.1| predicted protein [Populus trichocarpa] gi|2...   312   8e-83
ref|XP_002276833.2| PREDICTED: uncharacterized protein LOC100254...   310   5e-82

>emb|CBI32359.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  357 bits (917), Expect = 2e-96
 Identities = 175/248 (70%), Positives = 209/248 (84%)
 Frame = -2

Query: 1014 TSDVLKRGLEEDVLSSSIFDCPRGEKVKSRGVLIEKKIDFLENLAGKVSNRRSRRWLNDR 835
            T +VL+R  ++ +LSS + D  +GE  KS G+ IEKKI+FLENLAGKVSNRRSRRWLNDR
Sbjct: 6    TGEVLQRA-QDILLSSPLQDPSKGENEKSCGLSIEKKIEFLENLAGKVSNRRSRRWLNDR 64

Query: 834  LLIELVPRLDAEEIRGLFAPPPWGDSVPLSPFCMTNVGEWDSFRNIDMDEETSMIEALKG 655
            LL+ELVPRL+ +EIRGLFAPPPWGD VPLSPFCMTNVGEWD FRNIDMD++  MI+ALKG
Sbjct: 65   LLMELVPRLNGDEIRGLFAPPPWGDDVPLSPFCMTNVGEWDKFRNIDMDKQDGMIKALKG 124

Query: 654  SSAKKKCHVDSEKMAALNAWYRVDCRTREALRRSFLSELIEGYEECLRTFVKGTGEGDML 475
             S+K+K HVD++K+A LNAW+RV+CRTREALRRSFLSE+IEGYEECLR F+K +G+GD+L
Sbjct: 125  PSSKRKGHVDADKIAVLNAWHRVNCRTREALRRSFLSEVIEGYEECLRAFIKDSGDGDVL 184

Query: 474  VVHVQDPFRRLLLHGVCEFYDLVSVTVTKSKDXXXXXXXXXXXXXXXSMEVPNISLSYFL 295
            V+HVQDPFRRLLLHGVCEFY+LVSVTVT+SKD               S+E+PNI+LS+FL
Sbjct: 185  VLHVQDPFRRLLLHGVCEFYNLVSVTVTQSKDAESFKTTKIKKKKTGSVELPNITLSHFL 244

Query: 294  KMLKEGLW 271
            KM KEG W
Sbjct: 245  KMSKEGFW 252


>emb|CAN83384.1| hypothetical protein VITISV_018232 [Vitis vinifera]
          Length = 252

 Score =  357 bits (916), Expect = 3e-96
 Identities = 174/248 (70%), Positives = 209/248 (84%)
 Frame = -2

Query: 1014 TSDVLKRGLEEDVLSSSIFDCPRGEKVKSRGVLIEKKIDFLENLAGKVSNRRSRRWLNDR 835
            T +VL+R  ++ +LSS + D  +GE  KS G+ IEKKI+FLENLAGKVSNRRSRRWLNDR
Sbjct: 6    TGEVLQRA-QDILLSSPLQDPSKGENEKSCGLSIEKKIEFLENLAGKVSNRRSRRWLNDR 64

Query: 834  LLIELVPRLDAEEIRGLFAPPPWGDSVPLSPFCMTNVGEWDSFRNIDMDEETSMIEALKG 655
            LL+ELVPRL+ +EIRGLFAPPPWGD VPLSPFCMTNVGEWD FRN+DMD++  MI+ALKG
Sbjct: 65   LLMELVPRLNGDEIRGLFAPPPWGDDVPLSPFCMTNVGEWDKFRNVDMDKQDGMIKALKG 124

Query: 654  SSAKKKCHVDSEKMAALNAWYRVDCRTREALRRSFLSELIEGYEECLRTFVKGTGEGDML 475
             S+K+K HVD++K+A LNAW+RV+CRTREALRRSFLSE+IEGYEECLR F+K +G+GD+L
Sbjct: 125  PSSKRKGHVDADKIAVLNAWHRVNCRTREALRRSFLSEVIEGYEECLRAFIKDSGDGDVL 184

Query: 474  VVHVQDPFRRLLLHGVCEFYDLVSVTVTKSKDXXXXXXXXXXXXXXXSMEVPNISLSYFL 295
            V+HVQDPFRRLLLHGVCEFY+LVSVTVT+SKD               S+E+PNI+LS+FL
Sbjct: 185  VLHVQDPFRRLLLHGVCEFYNLVSVTVTQSKDAESFKTTKIKKKKTGSVELPNITLSHFL 244

Query: 294  KMLKEGLW 271
            KM KEG W
Sbjct: 245  KMSKEGFW 252


>gb|ABK96006.1| unknown [Populus trichocarpa]
          Length = 244

 Score =  314 bits (805), Expect = 2e-83
 Identities = 158/250 (63%), Positives = 193/250 (77%)
 Frame = -2

Query: 1020 MTTSDVLKRGLEEDVLSSSIFDCPRGEKVKSRGVLIEKKIDFLENLAGKVSNRRSRRWLN 841
            M T +VL+  +EE +LSSS    P+ E  K R + IEKKIDFLE+L GKVSNRRSRRWLN
Sbjct: 1    MATLEVLQM-VEEGLLSSS----PKAENEKPRDLSIEKKIDFLESLTGKVSNRRSRRWLN 55

Query: 840  DRLLIELVPRLDAEEIRGLFAPPPWGDSVPLSPFCMTNVGEWDSFRNIDMDEETSMIEAL 661
            DRLL+ELVPRLDAEEIRGLFAPPPWGD VPLSPFCMTN+GEWD FRNIDMD++ ++I+ L
Sbjct: 56   DRLLMELVPRLDAEEIRGLFAPPPWGDDVPLSPFCMTNMGEWDKFRNIDMDKQANIIDRL 115

Query: 660  KGSSAKKKCHVDSEKMAALNAWYRVDCRTREALRRSFLSELIEGYEECLRTFVKGTGEGD 481
               S K++  VD++KMA LNAW+R+DCRTR+ALRRSFL ELIE YE C+R F++  G+ +
Sbjct: 116  NRRSVKREGRVDADKMAVLNAWHRIDCRTRDALRRSFLVELIESYEACIRVFIQDGGD-E 174

Query: 480  MLVVHVQDPFRRLLLHGVCEFYDLVSVTVTKSKDXXXXXXXXXXXXXXXSMEVPNISLSY 301
            +L + VQDPF RLLLHGVCEFY+L SVT T+SKD                +E+PNI+LS 
Sbjct: 175  VLSLRVQDPFHRLLLHGVCEFYNLASVTETESKDAESFKTTKIKKKKMAVVELPNITLSN 234

Query: 300  FLKMLKEGLW 271
            FL+M KEG+W
Sbjct: 235  FLRMSKEGVW 244


>ref|XP_002332498.1| predicted protein [Populus trichocarpa] gi|222832608|gb|EEE71085.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  312 bits (800), Expect = 8e-83
 Identities = 157/250 (62%), Positives = 192/250 (76%)
 Frame = -2

Query: 1020 MTTSDVLKRGLEEDVLSSSIFDCPRGEKVKSRGVLIEKKIDFLENLAGKVSNRRSRRWLN 841
            M T +VL+  +EE +LSS     P+ E  K R + IEKKIDFLE+L GKVSNRRSRRWLN
Sbjct: 1    MATLEVLQM-VEEGLLSSP----PKAENEKPRDLSIEKKIDFLESLTGKVSNRRSRRWLN 55

Query: 840  DRLLIELVPRLDAEEIRGLFAPPPWGDSVPLSPFCMTNVGEWDSFRNIDMDEETSMIEAL 661
            DRLL+ELVPRLDAEEIRGLFAPPPWGD VPLSPFCMTN+GEWD FRNIDMD++ ++I+ L
Sbjct: 56   DRLLMELVPRLDAEEIRGLFAPPPWGDDVPLSPFCMTNMGEWDKFRNIDMDKQANIIDRL 115

Query: 660  KGSSAKKKCHVDSEKMAALNAWYRVDCRTREALRRSFLSELIEGYEECLRTFVKGTGEGD 481
               S K++  VD++KMA LNAW+R+DCRTR+ALRRSFL ELIE YE C+R F++  G+ +
Sbjct: 116  NRRSVKREGRVDADKMAVLNAWHRIDCRTRDALRRSFLVELIESYEACIRVFIQDGGD-E 174

Query: 480  MLVVHVQDPFRRLLLHGVCEFYDLVSVTVTKSKDXXXXXXXXXXXXXXXSMEVPNISLSY 301
            +L + VQDPF RLLLHGVCEFY+L SVT T+SKD                +E+PNI+LS 
Sbjct: 175  VLSLRVQDPFHRLLLHGVCEFYNLASVTETESKDAESFKTTKIKKKKMAVVELPNITLSN 234

Query: 300  FLKMLKEGLW 271
            FL+M KEG+W
Sbjct: 235  FLRMSKEGVW 244


>ref|XP_002276833.2| PREDICTED: uncharacterized protein LOC100254487 [Vitis vinifera]
          Length = 536

 Score =  310 bits (793), Expect = 5e-82
 Identities = 148/198 (74%), Positives = 176/198 (88%)
 Frame = -2

Query: 1014 TSDVLKRGLEEDVLSSSIFDCPRGEKVKSRGVLIEKKIDFLENLAGKVSNRRSRRWLNDR 835
            T +VL+R  ++ +LSS + D  +GE  KS G+ IEKKI+FLENLAGKVSNRRSRRWLNDR
Sbjct: 47   TGEVLQRA-QDILLSSPLQDPSKGENEKSCGLSIEKKIEFLENLAGKVSNRRSRRWLNDR 105

Query: 834  LLIELVPRLDAEEIRGLFAPPPWGDSVPLSPFCMTNVGEWDSFRNIDMDEETSMIEALKG 655
            LL+ELVPRL+ +EIRGLFAPPPWGD VPLSPFCMTNVGEWD FRNIDMD++  MI+ALKG
Sbjct: 106  LLMELVPRLNGDEIRGLFAPPPWGDDVPLSPFCMTNVGEWDKFRNIDMDKQDGMIKALKG 165

Query: 654  SSAKKKCHVDSEKMAALNAWYRVDCRTREALRRSFLSELIEGYEECLRTFVKGTGEGDML 475
             S+K+K HVD++K+A LNAW+RV+CRTREALRRSFLSE+IEGYEECLR F+K +G+GD+L
Sbjct: 166  PSSKRKGHVDADKIAVLNAWHRVNCRTREALRRSFLSEVIEGYEECLRAFIKDSGDGDVL 225

Query: 474  VVHVQDPFRRLLLHGVCE 421
            V+HVQDPFRRLLLHGVCE
Sbjct: 226  VLHVQDPFRRLLLHGVCE 243


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