BLASTX nr result

ID: Coptis24_contig00015936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015936
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...   103   2e-20
ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249...    96   2e-18
ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arab...    90   2e-16
ref|NP_201140.1| uncharacterized protein [Arabidopsis thaliana] ...    90   2e-16
gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo]         89   4e-16

>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -1

Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCRKERITLTVPCDVWKMEGGGFAWRLDVKAALSLG 199
           VWLVMK RVP  + A  CRVRLQY C KE+ +LT+PCDVW+M+GGGFAWRLDVKAALSLG
Sbjct: 229 VWLVMKARVPVTFPAITCRVRLQYRCGKEKNSLTLPCDVWRMDGGGFAWRLDVKAALSLG 288

Query: 198 R 196
           R
Sbjct: 289 R 289


>ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249110 [Vitis vinifera]
          Length = 301

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/61 (72%), Positives = 50/61 (81%)
 Frame = -1

Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCRKERITLTVPCDVWKMEGGGFAWRLDVKAALSLG 199
           VWLV KE++P  Y AF CRVRLQYT  KE+ + TVPCD W+M+ GGFAWRLDVKAALSLG
Sbjct: 241 VWLVAKEKLPYMYPAFTCRVRLQYTFGKEKHSQTVPCDAWRMDRGGFAWRLDVKAALSLG 300

Query: 198 R 196
           R
Sbjct: 301 R 301


>ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arabidopsis lyrata subsp.
           lyrata] gi|297312384|gb|EFH42808.1| hypothetical protein
           ARALYDRAFT_496519 [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
 Frame = -1

Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR-KERITLTVPCDVWKMEGGGFAWRLDVKAALSL 202
           V LVMKER    Y AF CRVRLQYTC+ +ER ++TVPCDVW+M+GGGFAWRLDVKAAL L
Sbjct: 245 VRLVMKERPMLTYPAFTCRVRLQYTCQDRERGSVTVPCDVWRMDGGGFAWRLDVKAALCL 304


>ref|NP_201140.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177443|dbj|BAB10739.1| unnamed protein product
           [Arabidopsis thaliana] gi|27754383|gb|AAO22640.1|
           unknown protein [Arabidopsis thaliana]
           gi|28393939|gb|AAO42377.1| unknown protein [Arabidopsis
           thaliana] gi|332010353|gb|AED97736.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 302

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
 Frame = -1

Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR-KERITLTVPCDVWKMEGGGFAWRLDVKAALSL 202
           V LVMKER    Y AF CRVRLQYTC+ +ER ++TVPCDVW+M+GGGFAWRLDVKAAL L
Sbjct: 243 VRLVMKERPMLTYPAFTCRVRLQYTCQDRERGSVTVPCDVWRMDGGGFAWRLDVKAALCL 302


>gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 275

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = -1

Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR--KERITLTVPCDVWKMEGGGFAWRLDVKAALS 205
           VWL +KER  + + AF CRV++QY  R  KER +LT PCD W+M+GGGFAWRLDVKAALS
Sbjct: 211 VWLELKERTEEWWPAFTCRVKVQYRSRWGKERSSLTAPCDAWRMDGGGFAWRLDVKAALS 270

Query: 204 LG 199
           LG
Sbjct: 271 LG 272


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