BLASTX nr result
ID: Coptis24_contig00015936
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015936 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244... 103 2e-20 ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249... 96 2e-18 ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arab... 90 2e-16 ref|NP_201140.1| uncharacterized protein [Arabidopsis thaliana] ... 90 2e-16 gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo] 89 4e-16 >ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera] Length = 289 Score = 103 bits (256), Expect = 2e-20 Identities = 46/61 (75%), Positives = 52/61 (85%) Frame = -1 Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCRKERITLTVPCDVWKMEGGGFAWRLDVKAALSLG 199 VWLVMK RVP + A CRVRLQY C KE+ +LT+PCDVW+M+GGGFAWRLDVKAALSLG Sbjct: 229 VWLVMKARVPVTFPAITCRVRLQYRCGKEKNSLTLPCDVWRMDGGGFAWRLDVKAALSLG 288 Query: 198 R 196 R Sbjct: 289 R 289 >ref|XP_002270738.1| PREDICTED: uncharacterized protein LOC100249110 [Vitis vinifera] Length = 301 Score = 96.3 bits (238), Expect = 2e-18 Identities = 44/61 (72%), Positives = 50/61 (81%) Frame = -1 Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCRKERITLTVPCDVWKMEGGGFAWRLDVKAALSLG 199 VWLV KE++P Y AF CRVRLQYT KE+ + TVPCD W+M+ GGFAWRLDVKAALSLG Sbjct: 241 VWLVAKEKLPYMYPAFTCRVRLQYTFGKEKHSQTVPCDAWRMDRGGFAWRLDVKAALSLG 300 Query: 198 R 196 R Sbjct: 301 R 301 >ref|XP_002866549.1| hypothetical protein ARALYDRAFT_496519 [Arabidopsis lyrata subsp. lyrata] gi|297312384|gb|EFH42808.1| hypothetical protein ARALYDRAFT_496519 [Arabidopsis lyrata subsp. lyrata] Length = 304 Score = 90.1 bits (222), Expect = 2e-16 Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%) Frame = -1 Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR-KERITLTVPCDVWKMEGGGFAWRLDVKAALSL 202 V LVMKER Y AF CRVRLQYTC+ +ER ++TVPCDVW+M+GGGFAWRLDVKAAL L Sbjct: 245 VRLVMKERPMLTYPAFTCRVRLQYTCQDRERGSVTVPCDVWRMDGGGFAWRLDVKAALCL 304 >ref|NP_201140.1| uncharacterized protein [Arabidopsis thaliana] gi|10177443|dbj|BAB10739.1| unnamed protein product [Arabidopsis thaliana] gi|27754383|gb|AAO22640.1| unknown protein [Arabidopsis thaliana] gi|28393939|gb|AAO42377.1| unknown protein [Arabidopsis thaliana] gi|332010353|gb|AED97736.1| uncharacterized protein [Arabidopsis thaliana] Length = 302 Score = 90.1 bits (222), Expect = 2e-16 Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%) Frame = -1 Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR-KERITLTVPCDVWKMEGGGFAWRLDVKAALSL 202 V LVMKER Y AF CRVRLQYTC+ +ER ++TVPCDVW+M+GGGFAWRLDVKAAL L Sbjct: 243 VRLVMKERPMLTYPAFTCRVRLQYTCQDRERGSVTVPCDVWRMDGGGFAWRLDVKAALCL 302 >gb|ADN33955.1| hypothetical protein [Cucumis melo subsp. melo] Length = 275 Score = 89.0 bits (219), Expect = 4e-16 Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 2/62 (3%) Frame = -1 Query: 378 VWLVMKERVPDNYTAFACRVRLQYTCR--KERITLTVPCDVWKMEGGGFAWRLDVKAALS 205 VWL +KER + + AF CRV++QY R KER +LT PCD W+M+GGGFAWRLDVKAALS Sbjct: 211 VWLELKERTEEWWPAFTCRVKVQYRSRWGKERSSLTAPCDAWRMDGGGFAWRLDVKAALS 270 Query: 204 LG 199 LG Sbjct: 271 LG 272