BLASTX nr result

ID: Coptis24_contig00015926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015926
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513817.1| biotin protein ligase, putative [Ricinus com...   193   1e-47
ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
emb|CBI19072.3| unnamed protein product [Vitis vinifera]              190   1e-46
ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vin...   190   1e-46

>ref|XP_002513817.1| biotin protein ligase, putative [Ricinus communis]
           gi|223546903|gb|EEF48400.1| biotin protein ligase,
           putative [Ricinus communis]
          Length = 334

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/128 (71%), Positives = 108/128 (84%)
 Frame = -1

Query: 385 KGFAFIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNVSVGIGLNVDNEMPTTCLNKVL 206
           KG  F+DV+IKWPNDLYLNG+KVGGILCTSTY+SKKFNVS GIGLNVDNE PTTCLN V 
Sbjct: 159 KGLPFLDVKIKWPNDLYLNGLKVGGILCTSTYKSKKFNVSAGIGLNVDNEKPTTCLNAVQ 218

Query: 205 SELSMMDCKLRREEILAAFFKRFENFYDVFINQGFRALEEMYCRVWLHSGQRVVIQEKNN 26
            ELS    +LRREEIL AFF +FE+ YD+F+NQGF++LEE+Y R WLHSGQRV++QE N+
Sbjct: 219 RELSPAASQLRREEILTAFFNKFESLYDLFLNQGFQSLEELYYRTWLHSGQRVIVQE-NS 277

Query: 25  EDESVDEV 2
            D+ V+ V
Sbjct: 278 GDQMVENV 285


>ref|XP_002307419.1| predicted protein [Populus trichocarpa] gi|222856868|gb|EEE94415.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/127 (72%), Positives = 105/127 (82%)
 Frame = -1

Query: 382 GFAFIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNVSVGIGLNVDNEMPTTCLNKVLS 203
           G   IDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFN+S GIGLNVDNE PTTCLN VL 
Sbjct: 163 GLPHIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNISAGIGLNVDNEKPTTCLNAVLR 222

Query: 202 ELSMMDCKLRREEILAAFFKRFENFYDVFINQGFRALEEMYCRVWLHSGQRVVIQEKNNE 23
           EL+   C LRRE+I+AAF  +FE  YD+FIN GF+ LEE+Y + WLHSGQRV+IQEK NE
Sbjct: 223 ELAGAACALRREDIVAAFLNKFEKLYDLFINGGFQTLEELYYKTWLHSGQRVIIQEK-NE 281

Query: 22  DESVDEV 2
           ++ V+ V
Sbjct: 282 NQVVENV 288


>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/127 (73%), Positives = 106/127 (83%)
 Frame = -1

Query: 382 GFAFIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNVSVGIGLNVDNEMPTTCLNKVLS 203
           G   IDVRIKWPNDLYLNG+KVGGIL TSTY+SKKFNVS GIGLNVDNE PTTCLN VL 
Sbjct: 165 GLPRIDVRIKWPNDLYLNGLKVGGILSTSTYKSKKFNVSTGIGLNVDNEKPTTCLNAVLR 224

Query: 202 ELSMMDCKLRREEILAAFFKRFENFYDVFINQGFRALEEMYCRVWLHSGQRVVIQEKNNE 23
           ELS   C LRRE+I+AAF  +FENFYD+FIN GF+ LEE+Y + WLHSGQRV+IQEK NE
Sbjct: 225 ELSAAACTLRREDIVAAFLNKFENFYDLFINGGFQTLEELYYKTWLHSGQRVIIQEK-NE 283

Query: 22  DESVDEV 2
           ++ V+ V
Sbjct: 284 NQVVENV 290


>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/128 (68%), Positives = 107/128 (83%)
 Frame = -1

Query: 385 KGFAFIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNVSVGIGLNVDNEMPTTCLNKVL 206
           KG   +DV+IKWPNDLYLNG+KVGGILCTSTY+S+KFNVS GIGLNVDNE PTTCLN VL
Sbjct: 247 KGLPHLDVKIKWPNDLYLNGLKVGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVL 306

Query: 205 SELSMMDCKLRREEILAAFFKRFENFYDVFINQGFRALEEMYCRVWLHSGQRVVIQEKNN 26
            ELS +  + RRE+I+AAFF +FE F+ +FINQGF+ LEE+YC+ WLHSGQRV++QE N 
Sbjct: 307 RELSSVAYQFRREDIVAAFFNKFETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQE-NI 365

Query: 25  EDESVDEV 2
           E + V+ V
Sbjct: 366 EGQMVENV 373


>ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vinifera]
          Length = 327

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/128 (68%), Positives = 107/128 (83%)
 Frame = -1

Query: 385 KGFAFIDVRIKWPNDLYLNGVKVGGILCTSTYRSKKFNVSVGIGLNVDNEMPTTCLNKVL 206
           KG   +DV+IKWPNDLYLNG+KVGGILCTSTY+S+KFNVS GIGLNVDNE PTTCLN VL
Sbjct: 158 KGLPHLDVKIKWPNDLYLNGLKVGGILCTSTYKSRKFNVSAGIGLNVDNEKPTTCLNAVL 217

Query: 205 SELSMMDCKLRREEILAAFFKRFENFYDVFINQGFRALEEMYCRVWLHSGQRVVIQEKNN 26
            ELS +  + RRE+I+AAFF +FE F+ +FINQGF+ LEE+YC+ WLHSGQRV++QE N 
Sbjct: 218 RELSSVAYQFRREDIVAAFFNKFETFFSLFINQGFQTLEELYCKTWLHSGQRVIVQE-NI 276

Query: 25  EDESVDEV 2
           E + V+ V
Sbjct: 277 EGQMVENV 284


Top