BLASTX nr result
ID: Coptis24_contig00015897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00015897
(2545 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34394.1| Mutator transposable element-related protein, put... 74 1e-24
gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group... 61 2e-20
gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:... 54 4e-18
gb|AAT40523.2| Mutator transposable element, putative [Solanum d... 56 7e-18
ref|NP_001056081.2| Os05g0522400 [Oryza sativa Japonica Group] g... 66 1e-17
>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
tuberosum]
Length = 616
Score = 73.6 bits (179), Expect(3) = 1e-24
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Frame = -1
Query: 1459 KEKNELGDLHVGGSDDGKF-LVTHTFGKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVIKP 1283
K + G+ S+ K+ ++ T W VDL+ R C C +W + GI C HA+A I+
Sbjct: 190 KNQTAAGEYIPRKSNQRKYEIIGATIHDSWAVDLENRICSCTKWSIMGIPCKHAIAAIRA 249
Query: 1282 RR---LPYVEYCSPTSLYKLKEEHAVVASPLICMKMNGKWLLKKSISTPP-----IRQRQ 1127
++ L YV+ C Y+ EHA+ + +NG + KS PP + ++
Sbjct: 250 KKDNILDYVDDCYKVETYRRIYEHAI-------LSINGPQMWPKSTKVPPLPLTIVGNKK 302
Query: 1126 PGRLKVNRKRGEDETATTR-----------CLCCHGFRHNARTCQ 1025
GR + R++ DE +R C C+ HN +TC+
Sbjct: 303 TGRKQKARRKEADEVGASRTKIKRKQQSLDCSTCNKPGHNKKTCK 347
Score = 61.6 bits (148), Expect(3) = 1e-24
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -3
Query: 1724 EAGAKDYLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMIL 1545
+ A D+L +++P W RSH K D L NN EV NS I +ARDKPI ++ + L
Sbjct: 101 DPNAVDWLNDKEPSQWSRSHLSSDAKCDILLNNICEVFNSMIFDARDKPIVTLLEKLRYL 160
Query: 1544 QMKLLFDRKERSITWIDPFV-PRVMDIIRKRK 1452
M + +E++ W V P++ DI+ K +
Sbjct: 161 LMARMLANREKAHKWSSNDVCPKIKDILHKNQ 192
Score = 26.9 bits (58), Expect(3) = 1e-24
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 1908 QKGLNNALVSVFPHCNQRFCFRHMVKKYEN*V*RTGF 1798
++ L A V P+ N RFC RH+ ++ R GF
Sbjct: 37 KESLIEAFNEVLPYVNHRFCARHLHNNFK----RAGF 69
>gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709800|gb|ABF97595.1| transposon protein, putative,
Mutator sub-class [Oryza sativa Japonica Group]
Length = 981
Score = 60.8 bits (146), Expect(3) = 2e-20
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Frame = -1
Query: 1384 GKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVIKPRRLPYVEYCSPTSLYKLKEEHAVVAS 1205
G + VD+ + CDC W +TGI C HA+A I+ L ++ Y + AV A
Sbjct: 721 GTKYIVDVVTKHCDCRRWDLTGIPCCHAIACIREDHLSEEDFL--PHCYSINAFKAVYAE 778
Query: 1204 PLI-------CMKMNGKWLLKKSISTPPIRQRQPGRLKVNRKRGEDET------------ 1082
+I KMNG +L PP+ +++ GR K +R++ E
Sbjct: 779 NIIPCNDKANWEKMNGPQIL------PPVYEKKVGRPKKSRRKQPQEVQGRNGPKLTKHG 832
Query: 1081 ATTRCLCCHGFRHNARTCQ 1025
T C CH HN + C+
Sbjct: 833 VTIHCSYCHEANHNKKGCE 851
Score = 52.4 bits (124), Expect(3) = 2e-20
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = -3
Query: 1715 AKDYLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMK 1536
A ++L P WVR+ F K D L NN EV N ILEAR+ PI M+ I M
Sbjct: 612 AYNWLEQMAPNTWVRAFFSDFPKCDILLNNSCEVFNKYILEAREMPILTMLEKIKGQLMT 671
Query: 1535 LLFDRKERSITWIDPFVPRV 1476
F++++ + W P P++
Sbjct: 672 RFFNKQKEAQKWQGPICPKI 691
Score = 34.7 bits (78), Expect(3) = 2e-20
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 1923 IISNRQKGLNNALVSVFPHCNQRFCFRHMVKKYE 1822
I++++QKGL A+ +FP RFC RH+ + ++
Sbjct: 541 IMTDKQKGLIPAVQQLFPDSEHRFCVRHLYQNFQ 574
>gb|AAC26234.1| contains similarity to maize transposon MuDR (GB:M76978) [Arabidopsis
thaliana]
Length = 940
Score = 53.9 bits (128), Expect(3) = 4e-18
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 18/154 (11%)
Frame = -1
Query: 1420 SDDGKFLVTHTFGKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVI-KPRRLP--YVEYCSP 1250
S + KF + G ++ VDL RTC C +W++TGI C HA+ VI + R P YV+
Sbjct: 670 SGENKFEILEGSG-YYSVDLLTRTCGCRQWELTGIPCPHAIYVITEHNRDPEDYVDRLLE 728
Query: 1249 TSLYKLKEEHAVVASPLICMKMNGKWLLKK----SISTPP-----------IRQRQPGRL 1115
T ++K + + MNG+ L K+ I P R ++PG
Sbjct: 729 TQVWKATYKDNI-------EPMNGERLWKRRGKGRIEVPDKRGKRGRPKKFARIKEPGES 781
Query: 1114 KVNRKRGEDETATTRCLCCHGFRHNARTCQGGEV 1013
N + E T C C HN +C+ V
Sbjct: 782 STNPTKLTREGKTVTCSNCKQIGHNKGSCKNPTV 815
Score = 50.1 bits (118), Expect(3) = 4e-18
Identities = 28/99 (28%), Positives = 47/99 (47%)
Frame = -3
Query: 1745 MDVI*KREAGAKDYLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKM 1566
MD + + A D L+ DP W R+ F + +SNN +E N I EAR P+ M
Sbjct: 562 MDALRSYDPDACDDLLKTDPTTWCRAFFSTHSSCEDVSNNLSESFNRTIREARKLPVVNM 621
Query: 1565 ISVIMILQMKLLFDRKERSITWIDPFVPRVMDIIRKRKK 1449
+ + + MK + +++ F P++M I+ +K
Sbjct: 622 LEEVRRISMKRISKLCDKTAKCETRFPPKIMQILEGNRK 660
Score = 35.8 bits (81), Expect(3) = 4e-18
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 1932 GLRIISNRQKGLNNALVSVFPHCNQRFCFRHMVKKYE 1822
G +IS++QKGL NA+ + P R C RH+ ++
Sbjct: 498 GFTVISDKQKGLINAVADLLPQAEHRHCARHVYANWK 534
>gb|AAT40523.2| Mutator transposable element, putative [Solanum demissum]
Length = 626
Score = 56.2 bits (134), Expect(3) = 7e-18
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = -1
Query: 1384 GKWWYVDLQRRTCDCNEWQVTGIVCAHAVAVI---KPRRLPYVEYCSPTSLYKLKEEHAV 1214
G W VDL RTC C +W+++G+ C HA++ I L YV+ C Y+ E ++
Sbjct: 528 GDNWAVDLYNRTCSCRQWELSGVPCKHAISSIWLKNDEVLNYVDDCYKVDTYRKIYEASI 587
Query: 1213 VASPLICMKMNGKWLLKKSISTPPIRQRQPGRLKVNRKRGE 1091
+ MNG L KS++ PP P N+K+G+
Sbjct: 588 -------LPMNGLDLWPKSLNPPPF----PPSYLNNKKKGK 617
Score = 53.1 bits (126), Expect(3) = 7e-18
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -3
Query: 1706 YLMNEDPRLWVRSHFDHIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMKLLF 1527
+L + P W RSHF + K D L NN EV N IL+ARDKPI K++ I L M +
Sbjct: 419 WLSAKVPSEWSRSHFSPLPKCDILLNNQCEVFNKFILDARDKPIVKLLETIRHLLMTRIN 478
Query: 1526 DRKERSITW-IDPFVPRVMDIIRKRKK 1449
+E++ W ++ P + + K K
Sbjct: 479 SIREKAEKWNLNDICPTIKKKLAKTMK 505
Score = 29.6 bits (65), Expect(3) = 7e-18
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 1911 RQKGLNNALVSVFPHCNQRFCFRHMVKKYEN*V*RTGFRSM 1789
+QKGL A V P + RFC RH+ ++ R G+ M
Sbjct: 348 KQKGLIEAFDLVLPGVSHRFCVRHLHNNFK----RAGYSGM 384
>ref|NP_001056081.2| Os05g0522400 [Oryza sativa Japonica Group]
gi|255676498|dbj|BAF17995.2| Os05g0522400 [Oryza sativa
Japonica Group]
Length = 649
Score = 66.2 bits (160), Expect(3) = 1e-17
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Frame = -1
Query: 1369 VDLQRRTCDCNEWQVTGIVCAHAVAVI-----KPRRLPYVEYCSPTSLYKLKEEHAVVAS 1205
V+L+ RTC C WQV+G C HA+A I + + +V+ C S+ LK +A +
Sbjct: 498 VNLKERTCTCRAWQVSGKPCDHALAFIAKLNREVQMDDFVDKC--FSIEMLKMAYAGQFN 555
Query: 1204 PLICMKMNGKWL---LKKSISTPPIRQRQPGRLKVNRKRGEDETATT---RCLCCHGFRH 1043
P M +W L I P +R R+PGR +V R R DE +T+ +C CH H
Sbjct: 556 P---MASKDEWAHVDLGYKIKKPRLR-RKPGRPRVARIRASDEASTSKRKKCSECHELGH 611
Query: 1042 NARTCQGG 1019
A+ CQGG
Sbjct: 612 TAKHCQGG 619
Score = 43.1 bits (100), Expect(3) = 1e-17
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = -3
Query: 1832 KNMKTRFRG--LDLEAWNXXXXXXXXXXXKLMDVI*KREAGAKDYLMNEDPRLWVRSHFD 1659
KNMK ++ G W MD I +R A +L + P +W RS F
Sbjct: 343 KNMKKKYHGPLFAQNMWAAAKSFTNVKFTYHMDKIKERCPEALTWLDDNHPYIWSRSKFY 402
Query: 1658 HIVKSDHLSNNFTEVGNSRILEARDKPIGKMISVIMILQMKLLFDRKERSITWIDPFVPR 1479
K D+++NN +E NS + + +D+ I + I + + R + + + +P
Sbjct: 403 EECKVDYINNNLSECFNSWVSKIKDRQIVDLHDTIRKMIISKFVSRAKLACKMDERIIPS 462
Query: 1478 VMDIIRKRKK 1449
+ + + + K
Sbjct: 463 ITNTLNAKSK 472
Score = 28.9 bits (63), Expect(3) = 1e-17
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -2
Query: 1932 GLRIISNRQKGLNNALVSVFPHCNQRFCFRH----MVKKY 1825
GL I ++ KG+ A+ V+P R C RH M KKY
Sbjct: 310 GLVISTDAGKGIEGAVDDVYPGVEHRECMRHLWKNMKKKY 349