BLASTX nr result

ID: Coptis24_contig00015881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015881
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...    71   1e-10

>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   PEVLRKPLTPSTYGNYFAALLYAEDYYIEKWNDYCLHDVKLELHKAAIYSKSSKN--KNL 176
           P VL KPL+ STY +YFAALLYAED+YIEKW+++ L ++ L+L +A I  KS +N  +N 
Sbjct: 260 PGVLNKPLSLSTYKDYFAALLYAEDFYIEKWSEFKLENITLKLQRAEIIKKSRRNEYRNE 319

Query: 177 IENDEDKLFVAFRIDSVPE 233
               +DK+FV F IDS  E
Sbjct: 320 TYEKDDKIFVEFEIDSCCE 338


>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = +3

Query: 3   PEVLRKPLTPSTYGNYFAALLYAEDYYIEKWNDYCLHDVKLELHKAAIYSKSSKNKNLIE 182
           PEVL + L+PSTY +YFAALLYAED+YIEKW+ + L ++ L+L  AAI  K  +N+   E
Sbjct: 342 PEVLNEMLSPSTYKDYFAALLYAEDFYIEKWSKFKLKNIALKLKDAAIIKKRGRNEYFGE 401

Query: 183 NDE--DKLFVAFRIDSVPE 233
           + E  +K FV F IDS  E
Sbjct: 402 SHEKDNKTFVEFEIDSCRE 420


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
           gi|223529456|gb|EEF31415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = +3

Query: 3   PEVLRKPLTPSTYGNYFAALLYAEDYYIEKWNDYCLHDVKLELHKAAIYSKSSKNKNLIE 182
           PEVL+KPL+ STY +YFAALLYAEDYYIEKW+ + L  + ++L + AI  +    K+   
Sbjct: 291 PEVLKKPLSLSTYKDYFAALLYAEDYYIEKWSKFKLVGITIKLQETAISKQIYFGKDY-- 348

Query: 183 NDEDKLFVAFRIDSVPE 233
             + K  VAF IDS  E
Sbjct: 349 ETDVKHLVAFEIDSSHE 365


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