BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015876
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   604   e-170
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   590   e-166
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   587   e-165
ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-li...   581   e-163

>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
            gi|297744098|emb|CBI37068.3| unnamed protein product
            [Vitis vinifera]
          Length = 392

 Score =  604 bits (1557), Expect = e-170
 Identities = 304/370 (82%), Positives = 341/370 (92%)
 Frame = +3

Query: 78   NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 257
            + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+PE  +P EY+RANKELRK+RSS+E
Sbjct: 13   STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 71

Query: 258  LITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDA 437
             IT+LR+KQKEIDGLKSL+AEC EDKDM +MAAEEL +A  EEKRLQNLLL SLLPKD+A
Sbjct: 72   HITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEA 131

Query: 438  DERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAI 617
            DERDCILEVRAGTGGEEASLFA+DIF+MYEKY+ K GWKF+VVDI ES LKG KEASGAI
Sbjct: 132  DERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAI 191

Query: 618  CGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTY 797
             GSG +G+LKFESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQLRNEDLRIDTY
Sbjct: 192  SGSGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTY 251

Query: 798  RSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLH 977
            RSGGSGGQHANTTNSAVR+THIP+G+TVAIQDERSQH NKAKAL+V+CAKLYE+ERSR+ 
Sbjct: 252  RSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQ 311

Query: 978  TSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLL 1157
              RSKLR +QIGSGDRSERIRTYNFPQGRVTDHRVGITHHS++DV++GENLDVF+DALLL
Sbjct: 312  KDRSKLRMEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLL 371

Query: 1158 KQEMDAIASF 1187
            +QEMDAIASF
Sbjct: 372  QQEMDAIASF 381


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
            gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
            thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
            release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  590 bits (1521), Expect = e-166
 Identities = 292/382 (76%), Positives = 341/382 (89%)
 Frame = +3

Query: 48   NGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 227
            + N+ R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRANK
Sbjct: 33   SSNMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPE-YSPEEFSRANK 89

Query: 228  ELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLL 407
            ELRK+R SM LI DLR+KQKEIDGLKSL++E  +DKDM D+A  ELDEA+ EEKRLQ LL
Sbjct: 90   ELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLL 149

Query: 408  LHSLLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGL 587
            L SLLPKD+ADERDCILEVRAGTGGEEASLFA+DIFRMYE+Y+ K+GWKFD+VDI ES +
Sbjct: 150  LKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDM 209

Query: 588  KGIKEASGAICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQL 767
            KG KEAS AICG+  +G+LKFESGIHRVQR+P+TEK+GR+HTSA+SVAILPQADEVDVQL
Sbjct: 210  KGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQL 269

Query: 768  RNEDLRIDTYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAK 947
            RNEDLRIDTYRSGGSGGQHANTTNSAVR+ H+PTG+ V+IQDERSQH N+AKAL+V+CA+
Sbjct: 270  RNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCAR 329

Query: 948  LYELERSRLHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGEN 1127
            LYE+ER R+ +SRSKLRSDQIGSGDRS RIRTYNFPQGRVTDHRVGITHH+I+D+++GEN
Sbjct: 330  LYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGEN 389

Query: 1128 LDVFVDALLLKQEMDAIASFSS 1193
            LD+F+DALLL+QEMDAIASFSS
Sbjct: 390  LDMFIDALLLRQEMDAIASFSS 411


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
            gi|223545675|gb|EEF47179.1| peptide chain release factor,
            putative [Ricinus communis]
          Length = 422

 Score =  587 bits (1512), Expect = e-165
 Identities = 297/381 (77%), Positives = 343/381 (90%), Gaps = 2/381 (0%)
 Frame = +3

Query: 54   NVKRFFST--NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 227
            N    FS   + E Q  LS DLI+IME RL AIEHR+  L+NF+++ E  +P+EYSRANK
Sbjct: 40   NASHLFSRAYSTELQSHLSPDLIRIMEQRLSAIEHRSAYLENFIDKLEA-SPAEYSRANK 98

Query: 228  ELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLL 407
            ELRK+R  +ELI++LRS QKEIDGL+SL+AECPEDK M DMA EEL++AI EEKRLQN+L
Sbjct: 99   ELRKLRRPVELISELRSIQKEIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVL 158

Query: 408  LHSLLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGL 587
            L SLLP DDADERDCILEVRAGTGGEEASLF++DIFRMYE+Y+ K+GWKF+VVDI ES L
Sbjct: 159  LKSLLPTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDL 218

Query: 588  KGIKEASGAICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQL 767
            KG KEAS AI G+G FG+LKFESGIHRVQRVP+TEK+GRVHTSAVSVAILPQADEVDVQL
Sbjct: 219  KGYKEASAAISGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQL 278

Query: 768  RNEDLRIDTYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAK 947
            RNEDLRIDTYRSGGSGGQHANTTNSAVR+TH+PTG+TV+IQDERSQH NKAKAL+V+CAK
Sbjct: 279  RNEDLRIDTYRSGGSGGQHANTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAK 338

Query: 948  LYELERSRLHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGEN 1127
            LYE+ERSR+  SRSKLRS+QIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I+++++GE+
Sbjct: 339  LYEIERSRIQMSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGES 398

Query: 1128 LDVFVDALLLKQEMDAIASFS 1190
            LDVF+DALLL+QEMDAIASFS
Sbjct: 399  LDVFIDALLLQQEMDAIASFS 419


>ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  584 bits (1505), Expect = e-164
 Identities = 290/357 (81%), Positives = 329/357 (92%)
 Frame = +3

Query: 123  METRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSMELITDLRSKQKEIDGL 302
            ME RL AIEHR+ CL+NFMNQPE  +P+E+SRANKELRK+R SMELIT LR+KQKEIDGL
Sbjct: 1    MEQRLSAIEHRSACLENFMNQPEA-SPTEFSRANKELRKLRGSMELITYLRTKQKEIDGL 59

Query: 303  KSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKDDADERDCILEVRAGTGG 482
            +SL+ ECPEDKDM DMA EEL +A+ EEKRLQNLLL SLLP+DDADERDCILEVRAG+GG
Sbjct: 60   RSLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGG 119

Query: 483  EEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASGAICGSGSFGRLKFESGI 662
            EEASLFA+DIF+MYE+++   GWKF+VV I ES LKG KEAS AI G+  FG+LKFESGI
Sbjct: 120  EEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGI 179

Query: 663  HRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 842
            HRVQRVP+TEK GRVHTSAVSVAILPQADEVD+QLRNEDLRIDTYRSGGSGGQHANTTNS
Sbjct: 180  HRVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRIDTYRSGGSGGQHANTTNS 239

Query: 843  AVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSRLHTSRSKLRSDQIGSGD 1022
            AVR+TH+PTG+TV+IQDERSQH NK+KAL+V+CAKLYE+ERSRLH SRS+LRS+QIGSGD
Sbjct: 240  AVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRLHMSRSRLRSEQIGSGD 299

Query: 1023 RSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDALLLKQEMDAIASFSS 1193
            RSERIRTYNFPQGRVTDHRVGITHHSI+DV++GE+LDVF+DALLL+QEMDAIASF S
Sbjct: 300  RSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQEMDAIASFGS 356


>ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  581 bits (1497), Expect = e-163
 Identities = 289/374 (77%), Positives = 336/374 (89%)
 Frame = +3

Query: 72   STNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSS 251
            S + E   QLS +L+ IME RL AIE+R +CL NF+NQPE  +PSEY+RANKELRK+  S
Sbjct: 41   SYSAEVPAQLSPELLNIMEQRLSAIEYRTSCLNNFLNQPEA-SPSEYARANKELRKLSGS 99

Query: 252  MELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRLQNLLLHSLLPKD 431
            ++LI +LR+KQKEIDGLKSL+AEC EDKDM +MA EE+ +A+ EE++LQNLLL SLLPKD
Sbjct: 100  VDLIKELRAKQKEIDGLKSLMAECSEDKDMLNMATEEMGQAVEEERKLQNLLLKSLLPKD 159

Query: 432  DADERDCILEVRAGTGGEEASLFALDIFRMYEKYAHKQGWKFDVVDIMESGLKGIKEASG 611
            DADERDCILEVRAGTGGEEASLFA+DIFRMYEKYA ++GWKF+VVDI +S  KG KEAS 
Sbjct: 160  DADERDCILEVRAGTGGEEASLFAMDIFRMYEKYALEKGWKFEVVDIAQSDHKGYKEASA 219

Query: 612  AICGSGSFGRLKFESGIHRVQRVPLTEKAGRVHTSAVSVAILPQADEVDVQLRNEDLRID 791
            AI G G F +LKFESGIHRVQRVP+TEK+GR+HTSAVSVAILPQADEVDVQL+NEDLRID
Sbjct: 220  AIAGDGVFRKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRID 279

Query: 792  TYRSGGSGGQHANTTNSAVRMTHIPTGLTVAIQDERSQHRNKAKALQVICAKLYELERSR 971
            TYRSGGSGGQHANTTNSAVR+THIPTG+ + IQDERSQH NKAKAL+V+CAKLYE+ER R
Sbjct: 280  TYRSGGSGGQHANTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLR 339

Query: 972  LHTSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIDDVLEGENLDVFVDAL 1151
            L +SRSKLR +QIGSGDRSERIRTYNFPQGRVTDHRVGIT+HS+DDV++GENLDVF+DAL
Sbjct: 340  LRSSRSKLRLEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDAL 399

Query: 1152 LLKQEMDAIASFSS 1193
            LL++EMDA+A+FSS
Sbjct: 400  LLQEEMDAMATFSS 413