BLASTX nr result

ID: Coptis24_contig00015873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015873
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16413.3| unnamed protein product [Vitis vinifera]              317   1e-84
ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246...   317   1e-84
ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arab...   313   2e-83
ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|2...   311   1e-82
ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] ...   307   1e-81

>emb|CBI16413.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  317 bits (813), Expect = 1e-84
 Identities = 152/250 (60%), Positives = 189/250 (75%)
 Frame = +3

Query: 18  LAKECTNIPTVLSSKTFRSELLASKNDSWREEMFSYYPHLTHTDEEAWADLFPRRILKKE 197
           L KECTN+PT LSS +FR ELLAS N+SW+ EMF +Y HL HTD+ AW++L PR++L++E
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLREE 81

Query: 198 EEFDWNKLYKLIKYXXXXXXXXXXXXXXEVSLHDVRLDPNSMYGIGQQTNLEYXXXXXXX 377
           +EF W  +Y+ +K               E+SLHDVRLD +S++G  QQTNL+Y       
Sbjct: 82  DEFSWAMMYRNMK----NYDGSNSNFLKEMSLHDVRLDSDSLHGRAQQTNLDYLLILDVD 137

Query: 378 XXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQAKMNAL 557
                FRK A L T G PYGGWE+P  ELRGHFVGHY+SA+A MWASTHN TL+ KM+A+
Sbjct: 138 RLVWSFRKTAGLSTPGLPYGGWEAPNVELRGHFVGHYMSASAQMWASTHNDTLKEKMSAV 197

Query: 558 ISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFAGNSQAL 737
           +SAL  CQ+ +G+GYLSAFPSELFDRFEAI+PVWAPYYTIHKI+AGL+DQY FAGNSQAL
Sbjct: 198 VSALATCQEKMGTGYLSAFPSELFDRFEAIKPVWAPYYTIHKILAGLLDQYTFAGNSQAL 257

Query: 738 KMVVWMADYF 767
           KM+ WM ++F
Sbjct: 258 KMMTWMVEHF 267


>ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera]
          Length = 864

 Score =  317 bits (813), Expect = 1e-84
 Identities = 152/250 (60%), Positives = 189/250 (75%)
 Frame = +3

Query: 18  LAKECTNIPTVLSSKTFRSELLASKNDSWREEMFSYYPHLTHTDEEAWADLFPRRILKKE 197
           L KECTN+PT LSS +FR ELLAS N+SW+ EMF +Y HL HTD+ AW++L PR++L++E
Sbjct: 23  LGKECTNVPTQLSSHSFRYELLASNNESWKAEMFQHY-HLIHTDDSAWSNLLPRKLLREE 81

Query: 198 EEFDWNKLYKLIKYXXXXXXXXXXXXXXEVSLHDVRLDPNSMYGIGQQTNLEYXXXXXXX 377
           +EF W  +Y+ +K               E+SLHDVRLD +S++G  QQTNL+Y       
Sbjct: 82  DEFSWAMMYRNMK----NYDGSNSNFLKEMSLHDVRLDSDSLHGRAQQTNLDYLLILDVD 137

Query: 378 XXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQAKMNAL 557
                FRK A L T G PYGGWE+P  ELRGHFVGHY+SA+A MWASTHN TL+ KM+A+
Sbjct: 138 RLVWSFRKTAGLSTPGLPYGGWEAPNVELRGHFVGHYMSASAQMWASTHNDTLKEKMSAV 197

Query: 558 ISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFAGNSQAL 737
           +SAL  CQ+ +G+GYLSAFPSELFDRFEAI+PVWAPYYTIHKI+AGL+DQY FAGNSQAL
Sbjct: 198 VSALATCQEKMGTGYLSAFPSELFDRFEAIKPVWAPYYTIHKILAGLLDQYTFAGNSQAL 257

Query: 738 KMVVWMADYF 767
           KM+ WM ++F
Sbjct: 258 KMMTWMVEHF 267


>ref|XP_002871536.1| hypothetical protein ARALYDRAFT_909245 [Arabidopsis lyrata subsp.
           lyrata] gi|297317373|gb|EFH47795.1| hypothetical protein
           ARALYDRAFT_909245 [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score =  313 bits (803), Expect = 2e-83
 Identities = 162/256 (63%), Positives = 183/256 (71%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3   FYLHALAKECTNIPTVLSSKTFRSELLASKNDSWREEMFSYYPHLTHTDEEAWADLFPRR 182
           F L  +AKECTN PT LSS TFRSELL SKN++ + E+FS+Y HLT TD+ AW+ L PR+
Sbjct: 17  FVLVCVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-HLTPTDDAAWSTLLPRK 75

Query: 183 ILKKE-EEFDWNKLYKLIKYXXXXXXXXXXXXXXEVSLHDVRLDPNSMYGIGQQTNLEYX 359
           +LK+E +EF W  LY+  K               EVSLHDVRLDPNS +G  QQTNLEY 
Sbjct: 76  MLKEEADEFAWTMLYRTFK-----DSNSSGNFLKEVSLHDVRLDPNSFHGRAQQTNLEYL 130

Query: 360 XXXXXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQ 539
                      FRK A L+  G  YGGWE P  ELRGHFVGHYLSATA MWASTHN TL+
Sbjct: 131 LMLDVDGLAWSFRKEAGLDAPGDHYGGWEKPDSELRGHFVGHYLSATAYMWASTHNDTLK 190

Query: 540 AKMNALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFA 719
            KM+AL+SAL ECQQ  G+GYLSAFPS  FDRFEAI PVWAPYYTIHKI+AGLVDQY  A
Sbjct: 191 EKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYYTIHKIIAGLVDQYKLA 250

Query: 720 GNSQALKMVVWMADYF 767
           GNSQAL+M   MADYF
Sbjct: 251 GNSQALQMATGMADYF 266


>ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1|
           predicted protein [Populus trichocarpa]
          Length = 858

 Score =  311 bits (797), Expect = 1e-82
 Identities = 152/249 (61%), Positives = 187/249 (75%)
 Frame = +3

Query: 21  AKECTNIPTVLSSKTFRSELLASKNDSWREEMFSYYPHLTHTDEEAWADLFPRRILKKEE 200
           +KECTN PT LSS TFR  LL+S+N++W+EEMF++Y HLT TD+ AWA+L PR+IL++E+
Sbjct: 19  SKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHY-HLTPTDDSAWANLLPRKILREED 77

Query: 201 EFDWNKLYKLIKYXXXXXXXXXXXXXXEVSLHDVRLDPNSMYGIGQQTNLEYXXXXXXXX 380
           E+ W  +Y+ +K               EVSLH+VRLDP+S++   QQTNLEY        
Sbjct: 78  EYSWAMMYRNLK----SPLKSSGNFLKEVSLHNVRLDPSSIHWQAQQTNLEYLLMLDVDS 133

Query: 381 XXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQAKMNALI 560
               FRK A L T G  YGGWE+P  ELRGHFVGHYLSA+A MWASTHN  L+ +M+A++
Sbjct: 134 LVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSASAQMWASTHNDILEKQMSAVV 193

Query: 561 SALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFAGNSQALK 740
           SAL  CQ+ +GSGYLSAFPSELFDRFEAI+PVWAPYYTIHKI+AGL+DQY FA N+QALK
Sbjct: 194 SALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIHKILAGLLDQYTFADNAQALK 253

Query: 741 MVVWMADYF 767
           MV WM DYF
Sbjct: 254 MVKWMVDYF 262


>ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis
           thaliana] gi|26451123|dbj|BAC42665.1| unknown protein
           [Arabidopsis thaliana] gi|332004451|gb|AED91834.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 861

 Score =  307 bits (787), Expect = 1e-81
 Identities = 159/256 (62%), Positives = 182/256 (71%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3   FYLHALAKECTNIPTVLSSKTFRSELLASKNDSWREEMFSYYPHLTHTDEEAWADLFPRR 182
           F L ++AKECTN PT LSS TFRSELL SKN++ + E+FS+Y HLT  D+ AW+ L PR+
Sbjct: 18  FVLVSVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-HLTPADDSAWSSLLPRK 76

Query: 183 ILKKE-EEFDWNKLYKLIKYXXXXXXXXXXXXXXEVSLHDVRLDPNSMYGIGQQTNLEYX 359
           +LK+E +EF W  LY+  K               +VSLHDVRLDP+S +   QQTNLEY 
Sbjct: 77  MLKEEADEFAWTMLYRKFK-----DSNSSGNFLKDVSLHDVRLDPDSFHWRAQQTNLEYL 131

Query: 360 XXXXXXXXXXXFRKNARLETLGQPYGGWESPAGELRGHFVGHYLSATALMWASTHNGTLQ 539
                      FRK A L+  G  YGGWE P  ELRGHFVGHYLSATA MWASTHN TL+
Sbjct: 132 LMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYLSATAYMWASTHNDTLK 191

Query: 540 AKMNALISALDECQQYIGSGYLSAFPSELFDRFEAIQPVWAPYYTIHKIMAGLVDQYLFA 719
            KM+AL+SAL ECQQ  G+GYLSAFPS  FDRFEAI PVWAPYYTIHKI+AGLVDQY  A
Sbjct: 192 EKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYYTIHKILAGLVDQYKLA 251

Query: 720 GNSQALKMVVWMADYF 767
           GNSQALKM   MADYF
Sbjct: 252 GNSQALKMATGMADYF 267


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