BLASTX nr result

ID: Coptis24_contig00015858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015858
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD98034.1| calmodulin [Striga asiatica]                            62   4e-08
ref|XP_002870301.1| hypothetical protein ARALYDRAFT_330049 [Arab...    62   6e-08
ref|XP_002517054.1| calmodulin, putative [Ricinus communis] gi|2...    62   6e-08
gb|AAT73620.1| caomodulin cam-207 [Daucus carota]                      62   6e-08
ref|XP_002314661.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>gb|ABD98034.1| calmodulin [Striga asiatica]
          Length = 150

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +1

Query: 73  MASVLTRDQISEFREVFSLFDNDGDGCITIEELATVIGS 189
           MA +L  +QI EF+E FSLFD DGDGCITIEELATV+GS
Sbjct: 1   MADLLNEEQIVEFQEAFSLFDKDGDGCITIEELATVMGS 39


>ref|XP_002870301.1| hypothetical protein ARALYDRAFT_330049 [Arabidopsis lyrata subsp.
           lyrata] gi|297316137|gb|EFH46560.1| hypothetical protein
           ARALYDRAFT_330049 [Arabidopsis lyrata subsp. lyrata]
          Length = 154

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 70  SMASVLTRDQISEFREVFSLFDNDGDGCITIEELATVIGS 189
           S  + LT+DQI+EF+E F LFD DGDGCIT+EELATVI S
Sbjct: 4   SQETALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRS 43


>ref|XP_002517054.1| calmodulin, putative [Ricinus communis] gi|223543689|gb|EEF45217.1|
           calmodulin, putative [Ricinus communis]
          Length = 150

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +1

Query: 73  MASVLTRDQISEFREVFSLFDNDGDGCITIEELATVIGS 189
           MA +LT +QI EF+E F LFD DGDGCITIEELATVI S
Sbjct: 1   MAEILTEEQIVEFKEAFCLFDKDGDGCITIEELATVIRS 39


>gb|AAT73620.1| caomodulin cam-207 [Daucus carota]
          Length = 149

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +1

Query: 73  MASVLTRDQISEFREVFSLFDNDGDGCITIEELATVIGS 189
           MA  LT DQISEF+E FSLFD DGDGCIT +EL TV+GS
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMGS 39


>ref|XP_002314661.1| predicted protein [Populus trichocarpa] gi|222863701|gb|EEF00832.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/39 (74%), Positives = 31/39 (79%)
 Frame = +1

Query: 73  MASVLTRDQISEFREVFSLFDNDGDGCITIEELATVIGS 189
           MA  LT +QI EFRE F LFD DGDGCIT+EELATVI S
Sbjct: 1   MAEALTEEQIVEFREAFCLFDKDGDGCITVEELATVIRS 39


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