BLASTX nr result

ID: Coptis24_contig00015842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015842
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330979.1| predicted protein [Populus trichocarpa] gi|1...   558   e-157
gb|ABK27154.1| unknown [Picea sitchensis]                             555   e-155
emb|CBI24336.3| unnamed protein product [Vitis vinifera]              553   e-155
ref|XP_002532583.1| vacuolar protein sorting 26, vps26, putative...   553   e-155
ref|XP_002269444.2| PREDICTED: vacuolar protein sorting-associat...   551   e-154

>ref|XP_002330979.1| predicted protein [Populus trichocarpa] gi|118486597|gb|ABK95137.1|
            unknown [Populus trichocarpa] gi|118488808|gb|ABK96214.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222872771|gb|EEF09902.1| predicted protein [Populus
            trichocarpa]
          Length = 301

 Score =  558 bits (1439), Expect = e-157
 Identities = 270/297 (90%), Positives = 288/297 (96%)
 Frame = +2

Query: 176  MNYIVGAFKPPCNITITFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVSIEPFHGK 355
            MN++VGAFKPPC+++I FADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEV IEP  GK
Sbjct: 1    MNFLVGAFKPPCSVSIIFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVVIEPVQGK 60

Query: 356  KVEHNGVKIELLGQIEMYFDKGNFYDFTSLVRELEVPGDIYERKSYPFEFSTVEMPYESY 535
            KVEHNGVKIELLGQIE+YFD+GN+YDFTSLVREL+VPG++YERK+YPFEFSTVEMPYESY
Sbjct: 61   KVEHNGVKIELLGQIELYFDRGNYYDFTSLVRELDVPGELYERKTYPFEFSTVEMPYESY 120

Query: 536  NGVNVRLRYVLKFTISRNYVSNMVEYQDLMVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 715
            NGVNVRLRY+LK TISRNYVSN+VE QD +V NYTPLPSINNSIKMEVGIEDCLHIEFEY
Sbjct: 121  NGVNVRLRYILKMTISRNYVSNIVESQDFVVHNYTPLPSINNSIKMEVGIEDCLHIEFEY 180

Query: 716  SKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 895
            SKSKYHLKDVI+GKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP
Sbjct: 181  SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 240

Query: 896  VRGESIPIRLFLSPYELTPTYRNTNNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRL 1066
            VRGESIP+RLFLSPYELTPTYRN NNKFSVKYYLNLVLVDEEDRRYFKQQEIT+YRL
Sbjct: 241  VRGESIPVRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITVYRL 297


>gb|ABK27154.1| unknown [Picea sitchensis]
          Length = 300

 Score =  555 bits (1430), Expect = e-155
 Identities = 267/300 (89%), Positives = 289/300 (96%)
 Frame = +2

Query: 176  MNYIVGAFKPPCNITITFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVSIEPFHGK 355
            MNY++GAFKPPC I+ITF+DG+TRKQ  +KKENGQT +VPLFQSQEN+VGEVSIEP  GK
Sbjct: 1    MNYLIGAFKPPCIISITFSDGKTRKQASVKKENGQTALVPLFQSQENVVGEVSIEPLAGK 60

Query: 356  KVEHNGVKIELLGQIEMYFDKGNFYDFTSLVRELEVPGDIYERKSYPFEFSTVEMPYESY 535
            KVEHNGVKIELLGQIE+YFD+GNFYDFTSLVREL+VPGD+++RK+YPFEFSTVEMPYESY
Sbjct: 61   KVEHNGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGDLHDRKTYPFEFSTVEMPYESY 120

Query: 536  NGVNVRLRYVLKFTISRNYVSNMVEYQDLMVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 715
            NGVNVRLRY+LK TISRNYVSN+VEYQD  VRNYTPLP++NNSIKMEVGIEDCLHIEFEY
Sbjct: 121  NGVNVRLRYILKVTISRNYVSNIVEYQDFWVRNYTPLPTVNNSIKMEVGIEDCLHIEFEY 180

Query: 716  SKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 895
            SKSKYHLKDV+IGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP
Sbjct: 181  SKSKYHLKDVVIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 240

Query: 896  VRGESIPIRLFLSPYELTPTYRNTNNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQES 1075
            VRGESIPIRLFLSPY+LTPTYRN NNKFSVKYYLNLVLVDEEDRRYFKQQEIT+YRL ES
Sbjct: 241  VRGESIPIRLFLSPYDLTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYRLLES 300


>emb|CBI24336.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  553 bits (1425), Expect = e-155
 Identities = 267/300 (89%), Positives = 288/300 (96%)
 Frame = +2

Query: 176  MNYIVGAFKPPCNITITFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVSIEPFHGK 355
            MNY+VGAFKPPCNI+I+FADGRTRKQVPLKKENGQTV VPLFQSQENIVGEV IEP  GK
Sbjct: 32   MNYLVGAFKPPCNISISFADGRTRKQVPLKKENGQTVKVPLFQSQENIVGEVVIEPTQGK 91

Query: 356  KVEHNGVKIELLGQIEMYFDKGNFYDFTSLVRELEVPGDIYERKSYPFEFSTVEMPYESY 535
            KVEH GVKIELLGQIEMYFD+GNFYDF+SLVREL+VPG++YE K+YPFEFSTVEMPYESY
Sbjct: 92   KVEHTGVKIELLGQIEMYFDRGNFYDFSSLVRELDVPGELYETKTYPFEFSTVEMPYESY 151

Query: 536  NGVNVRLRYVLKFTISRNYVSNMVEYQDLMVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 715
            NG+NVRLRY+LK T+ RN+VSN+VEYQD +V NYTPLPSINNSIKMEVGIEDCLHIEFEY
Sbjct: 152  NGINVRLRYILKVTVGRNFVSNIVEYQDFVVHNYTPLPSINNSIKMEVGIEDCLHIEFEY 211

Query: 716  SKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 895
            SKSKYHLKDVIIGKIYFLLVRIK+KNMELEIRRRESTGSGPNTYVETETLAKFE+MDGAP
Sbjct: 212  SKSKYHLKDVIIGKIYFLLVRIKMKNMELEIRRRESTGSGPNTYVETETLAKFEVMDGAP 271

Query: 896  VRGESIPIRLFLSPYELTPTYRNTNNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQES 1075
            VRGESIPIRLFLSPYELTPTYRN NNKFSVKY+LNLVLVD+EDRRYFKQQEIT+YRL E+
Sbjct: 272  VRGESIPIRLFLSPYELTPTYRNINNKFSVKYFLNLVLVDDEDRRYFKQQEITVYRLLET 331


>ref|XP_002532583.1| vacuolar protein sorting 26, vps26, putative [Ricinus communis]
            gi|223527692|gb|EEF29800.1| vacuolar protein sorting 26,
            vps26, putative [Ricinus communis]
          Length = 301

 Score =  553 bits (1424), Expect = e-155
 Identities = 264/300 (88%), Positives = 289/300 (96%)
 Frame = +2

Query: 176  MNYIVGAFKPPCNITITFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVSIEPFHGK 355
            MN+++GAFKPPC I+I FADGRTRKQVPLKKENGQ+V+VPLFQSQENIVGEV++EP  GK
Sbjct: 1    MNFLIGAFKPPCIISIIFADGRTRKQVPLKKENGQSVLVPLFQSQENIVGEVAVEPLQGK 60

Query: 356  KVEHNGVKIELLGQIEMYFDKGNFYDFTSLVRELEVPGDIYERKSYPFEFSTVEMPYESY 535
            K+EH G+KIELLGQIE+YFD+GNFYDFTSLVREL++PG++YERK+YPFEFSTVEMPYESY
Sbjct: 61   KLEHTGIKIELLGQIELYFDRGNFYDFTSLVRELDIPGELYERKTYPFEFSTVEMPYESY 120

Query: 536  NGVNVRLRYVLKFTISRNYVSNMVEYQDLMVRNYTPLPSINNSIKMEVGIEDCLHIEFEY 715
            NGVNVRLRY+LK T+SRNYVSN+VEYQD +VRNY+P PS+NNSIKMEVGIEDCLHIEFEY
Sbjct: 121  NGVNVRLRYILKVTVSRNYVSNIVEYQDFVVRNYSPPPSVNNSIKMEVGIEDCLHIEFEY 180

Query: 716  SKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 895
            SKSKYHLKDVI+GKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP
Sbjct: 181  SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP 240

Query: 896  VRGESIPIRLFLSPYELTPTYRNTNNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQES 1075
            VRGESIP RLFLSPYELTPTYRN NNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRL E+
Sbjct: 241  VRGESIPTRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLLEN 300


>ref|XP_002269444.2| PREDICTED: vacuolar protein sorting-associated protein 26-like [Vitis
            vinifera]
          Length = 465

 Score =  551 bits (1420), Expect = e-154
 Identities = 266/299 (88%), Positives = 287/299 (95%)
 Frame = +2

Query: 179  NYIVGAFKPPCNITITFADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVSIEPFHGKK 358
            NY+VGAFKPPCNI+I+FADGRTRKQVPLKKENGQTV VPLFQSQENIVGEV IEP  GKK
Sbjct: 166  NYLVGAFKPPCNISISFADGRTRKQVPLKKENGQTVKVPLFQSQENIVGEVVIEPTQGKK 225

Query: 359  VEHNGVKIELLGQIEMYFDKGNFYDFTSLVRELEVPGDIYERKSYPFEFSTVEMPYESYN 538
            VEH GVKIELLGQIEMYFD+GNFYDF+SLVREL+VPG++YE K+YPFEFSTVEMPYESYN
Sbjct: 226  VEHTGVKIELLGQIEMYFDRGNFYDFSSLVRELDVPGELYETKTYPFEFSTVEMPYESYN 285

Query: 539  GVNVRLRYVLKFTISRNYVSNMVEYQDLMVRNYTPLPSINNSIKMEVGIEDCLHIEFEYS 718
            G+NVRLRY+LK T+ RN+VSN+VEYQD +V NYTPLPSINNSIKMEVGIEDCLHIEFEYS
Sbjct: 286  GINVRLRYILKVTVGRNFVSNIVEYQDFVVHNYTPLPSINNSIKMEVGIEDCLHIEFEYS 345

Query: 719  KSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAPV 898
            KSKYHLKDVIIGKIYFLLVRIK+KNMELEIRRRESTGSGPNTYVETETLAKFE+MDGAPV
Sbjct: 346  KSKYHLKDVIIGKIYFLLVRIKMKNMELEIRRRESTGSGPNTYVETETLAKFEVMDGAPV 405

Query: 899  RGESIPIRLFLSPYELTPTYRNTNNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQES 1075
            RGESIPIRLFLSPYELTPTYRN NNKFSVKY+LNLVLVD+EDRRYFKQQEIT+YRL E+
Sbjct: 406  RGESIPIRLFLSPYELTPTYRNINNKFSVKYFLNLVLVDDEDRRYFKQQEITVYRLLET 464


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