BLASTX nr result

ID: Coptis24_contig00015835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015835
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   214   6e-54
emb|CBI33981.3| unnamed protein product [Vitis vinifera]              214   6e-54
gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]            201   5e-50
ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana] ...   201   5e-50
dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana]           201   5e-50

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  214 bits (545), Expect = 6e-54
 Identities = 109/166 (65%), Positives = 132/166 (79%)
 Frame = +2

Query: 2    FNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 181
            F+W  G+EVL M+G+   K RQS IN FNDP+S+V+VLLASTKAC EGI+LVGASR++LL
Sbjct: 900  FHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGASRVILL 959

Query: 182  DVVWNPSVERQAISRAYRIGQKKVVFAYHLITSGTMEGDKYRRQDLKDRLSELVFASTHS 361
            DVVWNPSVERQAISRAYR+GQ+KVV+ YHL+TSGTME +KY RQ  KDRLSELVF+S   
Sbjct: 960  DVVWNPSVERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDK 1019

Query: 362  HDDKLNGSLTTEDDAILQEMVANTKLKHMFKEIIYQPKESNLVDTY 499
                   S T  +D IL+EMV + KLK MF +II QPKESNL++T+
Sbjct: 1020 TSAGNKISSTVSEDKILEEMVQHNKLKDMFDKIINQPKESNLIETF 1065


>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  214 bits (545), Expect = 6e-54
 Identities = 109/166 (65%), Positives = 132/166 (79%)
 Frame = +2

Query: 2   FNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 181
           F+W  G+EVL M+G+   K RQS IN FNDP+S+V+VLLASTKAC EGI+LVGASR++LL
Sbjct: 384 FHWIVGKEVLYMDGQRDVKQRQSSINTFNDPASQVRVLLASTKACSEGISLVGASRVILL 443

Query: 182 DVVWNPSVERQAISRAYRIGQKKVVFAYHLITSGTMEGDKYRRQDLKDRLSELVFASTHS 361
           DVVWNPSVERQAISRAYR+GQ+KVV+ YHL+TSGTME +KY RQ  KDRLSELVF+S   
Sbjct: 444 DVVWNPSVERQAISRAYRLGQRKVVYIYHLLTSGTMEEEKYCRQAKKDRLSELVFSSKDK 503

Query: 362 HDDKLNGSLTTEDDAILQEMVANTKLKHMFKEIIYQPKESNLVDTY 499
                  S T  +D IL+EMV + KLK MF +II QPKESNL++T+
Sbjct: 504 TSAGNKISSTVSEDKILEEMVQHNKLKDMFDKIINQPKESNLIETF 549


>gb|AAF79734.1|AC005106_15 T25N20.14 [Arabidopsis thaliana]
          Length = 1465

 Score =  201 bits (511), Expect = 5e-50
 Identities = 101/169 (59%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
 Frame = +2

Query: 2    FNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 181
            F W  GEEVL M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1294 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1353

Query: 182  DVVWNPSVERQAISRAYRIGQKKVVFAYHLITSGTMEGDKYRRQDLKDRLSELVFASTHS 361
            DVVWNP+VERQAISRAYRIGQK++V+ YHL+  GT EG KY +Q  KDR+SELVFA +  
Sbjct: 1354 DVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSR 1413

Query: 362  HD---DKLNGSLTTEDDAILQEMVANTKLKHMFKEIIYQPKESNLVDTY 499
            HD   +K+  ++T  +D +L  MV ++KL  MF  +I QPKE++LV+ +
Sbjct: 1414 HDKGKEKIAEAVT--EDKVLDTMVEHSKLGDMFDNLIVQPKEADLVEGF 1460


>ref|NP_172040.2| chromatin remodeling 31 [Arabidopsis thaliana]
            gi|332189724|gb|AEE27845.1| chromatin remodeling 31
            [Arabidopsis thaliana]
          Length = 1410

 Score =  201 bits (511), Expect = 5e-50
 Identities = 101/169 (59%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
 Frame = +2

Query: 2    FNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 181
            F W  GEEVL M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1239 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1298

Query: 182  DVVWNPSVERQAISRAYRIGQKKVVFAYHLITSGTMEGDKYRRQDLKDRLSELVFASTHS 361
            DVVWNP+VERQAISRAYRIGQK++V+ YHL+  GT EG KY +Q  KDR+SELVFA +  
Sbjct: 1299 DVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSR 1358

Query: 362  HD---DKLNGSLTTEDDAILQEMVANTKLKHMFKEIIYQPKESNLVDTY 499
            HD   +K+  ++T  +D +L  MV ++KL  MF  +I QPKE++LV+ +
Sbjct: 1359 HDKGKEKIAEAVT--EDKVLDTMVEHSKLGDMFDNLIVQPKEADLVEGF 1405


>dbj|BAE98499.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1410

 Score =  201 bits (511), Expect = 5e-50
 Identities = 101/169 (59%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
 Frame = +2

Query: 2    FNWTEGEEVLQMEGKCKAKLRQSIINNFNDPSSKVKVLLASTKACREGINLVGASRIVLL 181
            F W  GEEVL M GK + K RQ++IN FNDP SK KV LASTKAC EGI+LVGASR++LL
Sbjct: 1239 FKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILL 1298

Query: 182  DVVWNPSVERQAISRAYRIGQKKVVFAYHLITSGTMEGDKYRRQDLKDRLSELVFASTHS 361
            DVVWNP+VERQAISRAYRIGQK++V+ YHL+  GT EG KY +Q  KDR+SELVFA +  
Sbjct: 1299 DVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVFACSSR 1358

Query: 362  HD---DKLNGSLTTEDDAILQEMVANTKLKHMFKEIIYQPKESNLVDTY 499
            HD   +K+  ++T  +D +L  MV ++KL  MF  +I QPKE++LV+ +
Sbjct: 1359 HDKGKEKIAEAVT--EDKVLDTMVEHSKLGDMFDNLIVQPKEADLVEGF 1405


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