BLASTX nr result

ID: Coptis24_contig00015832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015832
         (1907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33507.3| unnamed protein product [Vitis vinifera]              494   e-137
ref|XP_002302950.1| predicted protein [Populus trichocarpa] gi|1...   487   e-135
ref|XP_002531181.1| conserved hypothetical protein [Ricinus comm...   472   e-130
ref|XP_002276736.2| PREDICTED: uncharacterized protein LOC100251...   436   e-119
ref|XP_004156917.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   408   e-111

>emb|CBI33507.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  494 bits (1272), Expect = e-137
 Identities = 275/444 (61%), Positives = 320/444 (72%), Gaps = 8/444 (1%)
 Frame = +3

Query: 279  PMGTNSTNITESCRVINSFPKSLQYTGSHAIAQKIELRRPSYDHLLTAKLNFSSEGSRWI 458
            P+ T+ T+I++S   I+SF KS+++ G H+  Q +ELRR S  HLLTA+  FS++G   I
Sbjct: 12   PVATDRTSISKSQGTISSFSKSIKHCGLHSKNQGVELRRQSSGHLLTARYRFSNKGFWHI 71

Query: 459  SGKP----STRENSFLCHSTGTPNTEEK--VRHSDDCSDVSRAQIRHEEVKDL-FGHSST 617
             GK     S+R +S LC  TGT  TE K  V H  D SD+   Q+  EE ++L       
Sbjct: 72   CGKTGHYFSSRGSSVLCWLTGTHKTEAKQCVEHYSDRSDIPSVQLEDEEDENLVMPERII 131

Query: 618  YSSHGLAYICRFVHNDAKYVNERARNDLVLLSRGIMKLNDRACQDVAVLGSEFLKLDARA 797
            +S+ GLA  C+FV+NDAK+VNERARND+VLLSRGIM+L+ RA QDVA+LGSEFLKLDARA
Sbjct: 132  HSNQGLAEACKFVYNDAKFVNERARNDMVLLSRGIMRLDARARQDVAILGSEFLKLDARA 191

Query: 798  REDTEKIDHGVKKKAERLHHIATILKDKAQTKLRRAADKHWNDGXXXXXXXXXXXXXXXX 977
            REDTEKIDHGVKKKAERLHHIATILKDKAQ++L+ AADKHW+DG                
Sbjct: 192  REDTEKIDHGVKKKAERLHHIATILKDKAQSRLKSAADKHWSDGALEADLRRADFCAKQR 251

Query: 978  XMEDACMALEFVKNIDDIMVSKMYDLPLRRKQGSLSASDVLS-IMLEKNGKTVDFLSGGV 1154
             MEDA MALEFVKNI D+MVSKMY L    K+G+ S++D +  IMLEKNGKT+DF  G V
Sbjct: 252  AMEDALMALEFVKNIHDMMVSKMYKL----KKGTPSSNDTMGHIMLEKNGKTLDFFPGEV 307

Query: 1155 STDRITAIQEVYWSMASALSEADGIDYTDPEELELVVAALIDLDAMDGKXXXXXXXXXXX 1334
            STDRITAIQEVY SMASALSEADGIDYTDPEELEL+V  LIDLDAMDGK           
Sbjct: 308  STDRITAIQEVYLSMASALSEADGIDYTDPEELELLVTTLIDLDAMDGKSSVSLLAECSS 367

Query: 1335 XPNVSTRQALANALTAAPSMWTLGNAGMGALQRLAQDSNPXXXXXXXXXXNELKKQWEIA 1514
             P+V+TRQALANAL AAPSMWTLGNAGMGALQRLA+DSNP           ELKKQWEI 
Sbjct: 368  SPDVNTRQALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAVAASKAIYELKKQWEIE 427

Query: 1515 EGDSWRFTMNKKDAGEIDVTESND 1586
            EGDSWRFTMN+K   E D  E  D
Sbjct: 428  EGDSWRFTMNQKPMKEADDVEDTD 451


>ref|XP_002302950.1| predicted protein [Populus trichocarpa] gi|118488010|gb|ABK95826.1|
            unknown [Populus trichocarpa] gi|222844676|gb|EEE82223.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  487 bits (1253), Expect = e-135
 Identities = 269/445 (60%), Positives = 312/445 (70%), Gaps = 8/445 (1%)
 Frame = +3

Query: 279  PMGTNSTNITESCRVINSFPKSLQYTGSHAIAQKIELRRPSYDHLLTAKLNFSSEGSRWI 458
            P  T     + S  +I SF KS Q    H   Q IEL++ S  HLLTAKL FS E  + I
Sbjct: 12   PFVTQRKLTSTSHGIICSFSKSFQKNKLHPTHQGIELQQLSSKHLLTAKLAFSGESLQGI 71

Query: 459  SGKPST----RENSFLCHSTGTPNTEEK--VRHSDDCSDVSRAQI-RHEEVKDLFGHSST 617
             GKP +    R +S LC ST T  TEEK   R   D SD SRAQ+   E+   L    + 
Sbjct: 72   HGKPVSLIISRRSSTLCQSTRTHRTEEKECTRPYSDSSDSSRAQVGEKEDEHQLMSGRTI 131

Query: 618  YSSHGLAYICRFVHNDAKYVNERARNDLVLLSRGIMKLNDRACQDVAVLGSEFLKLDARA 797
            +S H LA  CRFV+NDAK+VNERARND++LLSRGI +L+ RA + VA+LGS FLKLDARA
Sbjct: 132  HSCHALAEACRFVYNDAKFVNERARNDIILLSRGISRLDARARKGVAILGSGFLKLDARA 191

Query: 798  REDTEKIDHGVKKKAERLHHIATILKDKAQTKLRRAADKHWNDGXXXXXXXXXXXXXXXX 977
            REDTEKID  VK+KAERLHHIATI+KD+AQTKL+ AADKHW+DG                
Sbjct: 192  REDTEKIDRDVKEKAERLHHIATIIKDRAQTKLKTAADKHWSDGALEADLRLADFRAKQR 251

Query: 978  XMEDACMALEFVKNIDDIMVSKMYDLPLRRKQGSLSASDVL-SIMLEKNGKTVDFLSGGV 1154
             MEDA MALEFVKNI ++MVSKMY  PLR+++GSL+A+ +L +IMLEKNG+T+DF  G V
Sbjct: 252  AMEDALMALEFVKNIHELMVSKMYKFPLRKEEGSLTANGILGNIMLEKNGRTLDFFPGEV 311

Query: 1155 STDRITAIQEVYWSMASALSEADGIDYTDPEELELVVAALIDLDAMDGKXXXXXXXXXXX 1334
            STDRITAIQE YWSMASALSEADGIDYTDPEELEL+V  LIDLDAMDGK           
Sbjct: 312  STDRITAIQEAYWSMASALSEADGIDYTDPEELELLVTTLIDLDAMDGKGSVSLLAECSN 371

Query: 1335 XPNVSTRQALANALTAAPSMWTLGNAGMGALQRLAQDSNPXXXXXXXXXXNELKKQWEIA 1514
             P+V+TRQALANAL AAPSMWTLGNAGMGALQRLA+D NP          +ELKKQWEI 
Sbjct: 372  SPDVNTRQALANALAAAPSMWTLGNAGMGALQRLAEDKNPAIANAASKTIHELKKQWEIQ 431

Query: 1515 EGDSWRFTMNKKDAGEIDVTESNDD 1589
            EGDSWRF MN+K   E+D  E N+D
Sbjct: 432  EGDSWRFMMNQKPVEEVDSQEDNND 456


>ref|XP_002531181.1| conserved hypothetical protein [Ricinus communis]
            gi|223529222|gb|EEF31196.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 457

 Score =  472 bits (1214), Expect = e-130
 Identities = 260/429 (60%), Positives = 307/429 (71%), Gaps = 7/429 (1%)
 Frame = +3

Query: 321  VINSFPKSLQYTGSHAIAQKIELRRPSYDHLLTAKLNFSSEGSRWISGKPST----RENS 488
            VI SF KSL  +   ++   IELR+ S  HLLTAKL  S++    I G+P +    R +S
Sbjct: 26   VICSFAKSLPQSKLQSVNHGIELRQLSSAHLLTAKLG-SADNLWGIHGQPVSFTVSRRSS 84

Query: 489  FLCHSTGTPNTEEK--VRHSDDCSDVSRAQIRHEEVKDLFGHSSTYSSHGLAYICRFVHN 662
             LCHST TP TEEK  VR   DCSD S AQI  E+       +  +S+ GLA  C+FV+N
Sbjct: 85   TLCHSTQTPGTEEKECVRPYGDCSDTS-AQIGEEDECSFMPGTIIHSNQGLAEACKFVYN 143

Query: 663  DAKYVNERARNDLVLLSRGIMKLNDRACQDVAVLGSEFLKLDARAREDTEKIDHGVKKKA 842
            DAKYVNERARND++LLSRGIM+L+ RA +DVA+LGS FLKLDARAREDTEKID  +KKKA
Sbjct: 144  DAKYVNERARNDIILLSRGIMRLDARARKDVAILGSGFLKLDARAREDTEKIDRNMKKKA 203

Query: 843  ERLHHIATILKDKAQTKLRRAADKHWNDGXXXXXXXXXXXXXXXXXMEDACMALEFVKNI 1022
            E L H+ATILKD+AQ++L+ AADKHW+DG                 MEDA MALEFVKNI
Sbjct: 204  ESLQHLATILKDRAQSRLKSAADKHWSDGALEADLRRADFRAKQRAMEDALMALEFVKNI 263

Query: 1023 DDIMVSKMYDLPLRRKQGSLSASDVLS-IMLEKNGKTVDFLSGGVSTDRITAIQEVYWSM 1199
             D+MVSK Y  PL++++GSLS +++L  IMLEKNG+T+DF  G VSTDRITAIQE YWSM
Sbjct: 264  HDLMVSKTYKFPLQKEKGSLSTNEILGRIMLEKNGRTLDFFPGEVSTDRITAIQEAYWSM 323

Query: 1200 ASALSEADGIDYTDPEELELVVAALIDLDAMDGKXXXXXXXXXXXXPNVSTRQALANALT 1379
            ASALSEADGIDYTDPEELEL++  LIDLDAMDGK            P+V+TRQALANAL 
Sbjct: 324  ASALSEADGIDYTDPEELELLITTLIDLDAMDGKSSVSLLAECSSSPDVNTRQALANALA 383

Query: 1380 AAPSMWTLGNAGMGALQRLAQDSNPXXXXXXXXXXNELKKQWEIAEGDSWRFTMNKKDAG 1559
            AAPSMWTLGNAGMGALQRLA+D NP           ELKKQWEI EGDSWRF MN+K   
Sbjct: 384  AAPSMWTLGNAGMGALQRLAEDRNPVIAAAASRTIYELKKQWEIGEGDSWRFMMNQKSEE 443

Query: 1560 EIDVTESND 1586
            ++D  E N+
Sbjct: 444  KVDGQEDNN 452


>ref|XP_002276736.2| PREDICTED: uncharacterized protein LOC100251878 [Vitis vinifera]
          Length = 399

 Score =  436 bits (1121), Expect = e-119
 Identities = 239/363 (65%), Positives = 268/363 (73%), Gaps = 4/363 (1%)
 Frame = +3

Query: 510  TPNTEEK--VRHSDDCSDVSRAQIRHEEVKDL-FGHSSTYSSHGLAYICRFVHNDAKYVN 680
            T  TE K  V H  D SD+   Q+  EE ++L       +S+ GLA  C+FV+NDAK+VN
Sbjct: 41   THKTEAKQCVEHYSDRSDIPSVQLEDEEDENLVMPERIIHSNQGLAEACKFVYNDAKFVN 100

Query: 681  ERARNDLVLLSRGIMKLNDRACQDVAVLGSEFLKLDARAREDTEKIDHGVKKKAERLHHI 860
            ERARND+VLLSRGIM+L+ RA QDVA+LGSEFLKLDARAREDTEKIDHGVKKKAERLHHI
Sbjct: 101  ERARNDMVLLSRGIMRLDARARQDVAILGSEFLKLDARAREDTEKIDHGVKKKAERLHHI 160

Query: 861  ATILKDKAQTKLRRAADKHWNDGXXXXXXXXXXXXXXXXXMEDACMALEFVKNIDDIMVS 1040
            ATILKDKAQ++L+ AADKHW+DG                 MEDA MALEFVKNI D+MVS
Sbjct: 161  ATILKDKAQSRLKSAADKHWSDGALEADLRRADFCAKQRAMEDALMALEFVKNIHDMMVS 220

Query: 1041 KMYDLPLRRKQGSLSASDVLS-IMLEKNGKTVDFLSGGVSTDRITAIQEVYWSMASALSE 1217
            KMY L    K+G+ S++D +  IMLEKNGKT+DF  G VSTDRITAIQEVY SMASALSE
Sbjct: 221  KMYKL----KKGTPSSNDTMGHIMLEKNGKTLDFFPGEVSTDRITAIQEVYLSMASALSE 276

Query: 1218 ADGIDYTDPEELELVVAALIDLDAMDGKXXXXXXXXXXXXPNVSTRQALANALTAAPSMW 1397
            ADGIDYTDPEELEL+V  LIDLDAMDGK            P+V+TRQALANAL AAPSMW
Sbjct: 277  ADGIDYTDPEELELLVTTLIDLDAMDGKSSVSLLAECSSSPDVNTRQALANALAAAPSMW 336

Query: 1398 TLGNAGMGALQRLAQDSNPXXXXXXXXXXNELKKQWEIAEGDSWRFTMNKKDAGEIDVTE 1577
            TLGNAGMGALQRLA+DSNP           ELKKQWEI EGDSWRFTMN+K   E D  E
Sbjct: 337  TLGNAGMGALQRLAEDSNPAIAVAASKAIYELKKQWEIEEGDSWRFTMNQKPMKEADDVE 396

Query: 1578 SND 1586
              D
Sbjct: 397  DTD 399


>ref|XP_004156917.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207516 [Cucumis
            sativus]
          Length = 418

 Score =  408 bits (1048), Expect = e-111
 Identities = 228/404 (56%), Positives = 275/404 (68%), Gaps = 11/404 (2%)
 Frame = +3

Query: 411  LLTAKLNFSSEGSRWISGKP----STRENSFLCHSTGTPN--TEEKVRHSDDCSDVSRAQ 572
            ++T K+  SS   R   GKP     +R  + LC STGT +  TEE  R  D  + +  AQ
Sbjct: 13   VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 72

Query: 573  IRHEEV-KDLFGHSSTYSSHGLAYICRFVHNDAKYVNERARNDLVLLSRGIMKLNDRACQ 749
               +E  +  F   +  S+ G+   CRF +NDAK+VNERARND+VLLSRGIM+LN RA Q
Sbjct: 73   TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRGIMRLNARARQ 132

Query: 750  DVAVLGSEFLKLDARAREDTEKIDHGVKKKAERLHHIATILKDKAQTKLRRAADKHWNDG 929
            DVA+LGSEFLKLDARAREDTE ID  VK+KAERL  IAT L++KAQ+ L+ AAD+HW+DG
Sbjct: 133  DVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKAQSSLKNAADEHWSDG 192

Query: 930  XXXXXXXXXXXXXXXXXMEDACMALEFVKNIDDIMVSKMYDLPLRRKQGSLSASDVLS-I 1106
                             MEDA MALEFVKNI D+MV KMY+ P   + G   A+D++  I
Sbjct: 193  ALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQSNQSGFPIANDMMDRI 252

Query: 1107 MLEKNGKTVDFLSGGVSTDRITAIQEVYWSMASALSEADGIDYTDPEELELVVAALIDLD 1286
             L KNGK++DFL+G +STDRI+AIQE+YWSMASALSEADGIDYTDPEELEL++  L+DLD
Sbjct: 253  KLXKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELLIRTLMDLD 312

Query: 1287 AMDGKXXXXXXXXXXXXPNVSTRQALANALTAAPSMWTLGNAGMGALQRLAQDSNPXXXX 1466
            AMDGK            P+ +TRQALANAL AAPSMWTLGNAGMGALQRLA+D+NP    
Sbjct: 313  AMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAEDNNPAIAA 372

Query: 1467 XXXXXXNELKKQWEIAEGDSWRFTMNKK---DAGEIDVTESNDD 1589
                   ELKKQWEI EGDSW FT+N+K   +  E D  E N D
Sbjct: 373  AASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNAD 416


Top