BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015829
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGC42647.1| transcript antisense to ribosomal RNA protein [Aj...    79   6e-17
ref|NP_690845.1| Tar1p [Saccharomyces cerevisiae S288c] gi|74644...    87   2e-15
ref|XP_453850.1| hypothetical protein [Kluyveromyces lactis NRRL...    86   2e-15
gb|EME80501.1| hypothetical protein MYCFIDRAFT_54532 [Pseudocerc...    65   6e-09
gb|EKU20754.1| transcript antisense to ribosomal rna protein [Na...    41   2e-06

>gb|EGC42647.1| transcript antisense to ribosomal RNA protein [Ajellomyces
           capsulatus H88]
          Length = 199

 Score = 79.3 bits (194), Expect(2) = 6e-17
 Identities = 39/56 (69%), Positives = 44/56 (78%)
 Frame = +1

Query: 70  RDSHPL*RPVPRNLDGGQLQRYLLQITTRTPEGPDFKFELLPLHSPLLGQSLLVSF 237
           RDSHPL RPVP +LD G+ +  L ++  R P GPDFKFELLPLHSPLL QSLLVSF
Sbjct: 52  RDSHPLRRPVPGDLDRGRARSILCKLQLRPPGGPDFKFELLPLHSPLLRQSLLVSF 107



 Score = 32.7 bits (73), Expect(2) = 6e-17
 Identities = 17/27 (62%), Positives = 18/27 (66%), Gaps = 6/27 (22%)
 Frame = +3

Query: 6   AAFPNNSTRRRSFT------WNRSTHP 68
           AAFPNNSTRRRSFT        R +HP
Sbjct: 30  AAFPNNSTRRRSFTRARPAGRRRDSHP 56


>ref|NP_690845.1| Tar1p [Saccharomyces cerevisiae S288c]
           gi|74644329|sp|Q8TGM6.1|TAR1_YEAST RecName: Full=Protein
           TAR1; AltName: Full=Transcript antisense to ribosomal
           RNA protein 1 gi|18767124|gb|AAL79277.1| unknown
           [Saccharomyces cerevisiae] gi|256271730|gb|EEU06768.1|
           Tar1p [Saccharomyces cerevisiae JAY291]
           gi|259148146|emb|CAY81395.1| Tar1p [Saccharomyces
           cerevisiae EC1118] gi|285813570|tpg|DAA09466.1| TPA:
           Tar1p [Saccharomyces cerevisiae S288c]
           gi|349579878|dbj|GAA25039.1| K7_Tar1p [Saccharomyces
           cerevisiae Kyokai no. 7] gi|380294105|gb|AFD50638.1|
           Tar1p [Saccharomyces cerevisiae]
          Length = 124

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/60 (70%), Positives = 46/60 (76%)
 Frame = +3

Query: 3   RAAFPNNSTRRRSFTWNRSTHPTGFSPSVTSCSKELRRGPTPKIPSANYNSDPGGARFQI 182
           RAAFPNNST RR FT NR+   TGFSPS+TSCSKE R+G  PK+PS NYNS   G RFQI
Sbjct: 65  RAAFPNNSTLRRHFTKNRTPRHTGFSPSMTSCSKEHRQGTAPKLPSPNYNSGTEGTRFQI 124


>ref|XP_453850.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
           gi|302310626|ref|XP_453838.2| hypothetical protein
           [Kluyveromyces lactis NRRL Y-1140]
           gi|302310628|ref|XP_453844.2| hypothetical protein
           [Kluyveromyces lactis NRRL Y-1140]
           gi|82582284|sp|Q6CQE5.2|TAR1_KLULA RecName: Full=Protein
           TAR1 gi|49642984|emb|CAH00946.1| KLLA0D17864p
           [Kluyveromyces lactis] gi|199425056|emb|CAH00934.2|
           KLLA0D17600p [Kluyveromyces lactis]
           gi|199425057|emb|CAH00940.2| KLLA0D17732p [Kluyveromyces
           lactis]
          Length = 109

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/60 (70%), Positives = 47/60 (78%)
 Frame = +3

Query: 3   RAAFPNNSTRRRSFTWNRSTHPTGFSPSVTSCSKELRRGPTPKIPSANYNSDPGGARFQI 182
           RAAFPNNSTRR+ FT N     TGFSPS+TSCSKE R+GP  K+PS+NYNSD   ARFQI
Sbjct: 50  RAAFPNNSTRRKHFTNNWDPRHTGFSPSMTSCSKEHRQGPATKLPSSNYNSDVEDARFQI 109


>gb|EME80501.1| hypothetical protein MYCFIDRAFT_54532 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 181

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/45 (71%), Positives = 34/45 (75%)
 Frame = +3

Query: 3   RAAFPNNSTRRRSFTWNRSTHPTGFSPSVTSCSKELRRGPTPKIP 137
           RAAFPNNSTRRRS+    S   TGFSPS+TSCSKELR   TPK P
Sbjct: 124 RAAFPNNSTRRRSYVEGASQSRTGFSPSMTSCSKELRPAATPKHP 168


>gb|EKU20754.1| transcript antisense to ribosomal rna protein [Nannochloropsis
           gaditana CCMP526]
          Length = 154

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = +1

Query: 169 PDFKFELLPLHSPLLGQSLLVSF 237
           PDF+ EL PLHSPLLG+S LVSF
Sbjct: 121 PDFQVELFPLHSPLLGESWLVSF 143



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = +2

Query: 5   SCIPKQLDSSKELHMESVHPSHGILTLCDVLFQGT 109
           SC PKQLDSSK     +    +G +TL   LFQGT
Sbjct: 66  SCNPKQLDSSKTRRRRTHASMYGTVTLWGALFQGT 100