BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015828
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15349.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    96   5e-18
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...    95   8e-18
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    84   2e-14
ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase H...    78   1e-12

>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  119 bits (299), Expect = 3e-25
 Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 33/219 (15%)
 Frame = +1

Query: 25  MSEKTEKEIEIRSLSGESVIISISPNXXXXXXXXXXXXXFTPAKNSPNFHLFFKGAKMRM 204
           M+E+ E+EIE+RSLSGES  +SIS N             F PA NSPNFHLFFKGAK+ +
Sbjct: 4   MAER-EREIEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSL 62

Query: 205 ESIISSYTIEKEEFIVLVPFTKKNIQSQTHSKPYDQSVKRTPSSNCTDSTWDDLMQDL-- 378
           +S ++S+ I   +F+VLVPFTKK ++    S    +   ++P SN  DS W D+MQDL  
Sbjct: 63  QSKLNSHPIGSGKFMVLVPFTKK-VRQCNQSATTSEVPNQSPVSNFADSAWSDMMQDLRT 121

Query: 379 ---------------SSFVERNRNN-----KGLYEIPKKDESRNGLVGDVINGGKSGIV- 495
                           S +E  RN         Y + +K   R    GD   G    ++ 
Sbjct: 122 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERK---RKKFHGDKQEGSSDDLIL 178

Query: 496 ----------LDEKGYEKVVKVMDRVNCLCDAKSLECLI 582
                     LD++  E +++V++ VNCL D +S  C++
Sbjct: 179 SLLKSPCKIFLDKQNCEILIRVLESVNCLLDMRSGSCML 217


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
 Frame = +1

Query: 31  EKTEKEIEIRSLSGESVIISISPNXXXXXXXXXXXXXFTPAKNSPNFHLFFKGAKMRMES 210
           E++E+EI I++LSG+S+ +S+S N             F  A  SPNFHLFFKG K++ +S
Sbjct: 2   EESEREISIKTLSGQSLTVSVSGNSTIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQS 61

Query: 211 IISSYTIEKEEFIVLVPFTKKNIQSQTHSKPY--DQSVKR-TPSSNCTDSTWDDLMQDLS 381
            IS+  I+  EF+VL+PF KK          Y  + SV   T  S   DS W D++QDLS
Sbjct: 62  QISACCIDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDLS 121

Query: 382 SF--------------VERNRNNKGLYE-----------IPKKDESRNGLVGDVINGGKS 486
                            ER  +  G  +           +  K + + G   D +NG   
Sbjct: 122 YLHGCSVEGREATVPESERGSSEVGGVDAELEASCSTSFLSSKAKGKVGFGYDGLNGSLD 181

Query: 487 GIV-----------LDEKGYEKVVKVMDRVNCLCDAKSLECLISK 588
            ++           L+E+  E  +K ++ V+CL D ++  C+++K
Sbjct: 182 DVLRNFSLSPTEGFLNEQTGESFIKFLESVDCLTDPRNGSCMLAK 226


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
 Frame = +1

Query: 31  EKTEKEIEIRSLSGESVIISISPNXXXXXXXXXXXXXFTPAKNSPNFHLFFKGAKMRMES 210
           E++E+EI I++LSG+S+ +S+S N             F  A  SPNFHLFFKG K++ +S
Sbjct: 2   EESEREISIKTLSGQSLTVSVSGNSSIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQS 61

Query: 211 IISSYTIEKEEFIVLVPFTKKNIQSQTHSKPY--DQSVKR-TPSSNCTDSTWDDLMQDLS 381
            +S+  I+  EF+VL+PF KK          Y  + SV   T  S   DS W D++QDLS
Sbjct: 62  QLSACCIDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDLS 121

Query: 382 SF--------------VERNRNNKGLYE-----------IPKKDESRNGLVGDVINGGKS 486
                            ER  +  G  +           +  K + + G   D +NG   
Sbjct: 122 YLHGCSVEGREATVPESERGSSEVGGVDAELEASCSTSFLSSKAKGKVGFGYDGLNGSLD 181

Query: 487 GIV-----------LDEKGYEKVVKVMDRVNCLCDAKSLECLISK 588
            ++           L+E+  E  +K ++ V+CL D ++  C+++K
Sbjct: 182 DVLRNFSLSPTEGFLNEQTGESFIKFLESVDCLTDPRNGNCMLAK 226


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
 Frame = +1

Query: 25  MSEKTEKEIEIRSLSGESVIISISPNXXXXXXXXXXXXXFTPAKNSPNFHLFFKGAKMRM 204
           M+E+ E+EIE+RSLSGES  +SIS N                        L  +GAK+ +
Sbjct: 1   MAER-EREIEVRSLSGESTTVSISENKTIEDLKL----------------LLNQGAKLSL 43

Query: 205 ESIISSYTIEKEEFIVLVPFTKKNIQSQTHSKPYDQSVKRTPSSNCTDSTWDDLMQDL-- 378
           +S ++S+ I   +F+VLVPFTKK ++    S    +   ++P SN  DS W D+MQDL  
Sbjct: 44  QSKLNSHPIGSGKFMVLVPFTKK-VRQCNQSATTSEVPNQSPVSNFADSAWSDMMQDLRT 102

Query: 379 ---------------SSFVERNRNN-----KGLYEIPKKDESRNGLVGDVINGGKSGIV- 495
                           S +E  RN         Y + +K   R    GD   G    ++ 
Sbjct: 103 LSNMSNNENQTNFDSGSVIEGVRNELMEEASATYTLERK---RKKFHGDKQEGSSDDLIL 159

Query: 496 ----------LDEKGYEKVVKVMDRVNCLCDAKSLECLI 582
                     LD++  E +++V++ VNCL D +S  C++
Sbjct: 160 SLLKSPCKIFLDKQNCEILIRVLESVNCLLDMRSGSCML 198


>ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Brachypodium
           distachyon]
          Length = 1015

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
 Frame = +1

Query: 40  EKEIEIRSLSGESVIISISPNXXXXXXXXXXXXXFTPAKNSPNFHLFFKGAKMRMESIIS 219
           E+E+++R+L G S  ++++               F PA+ S NFHLF KGAK+R+++ I 
Sbjct: 5   ERELQVRALDGRSTAVTLAATASVRDLKAALRSSFPPAQISHNFHLFLKGAKLRLDAEIG 64

Query: 220 SYTIEKEEFIVLVPFTKKNIQSQTHSKPYDQSVKRTPSSN----CTDSTWDDLMQDLSSF 387
           S      E IVLVPF +K++Q    + P  +     P S+      +S W D+M DLSS 
Sbjct: 65  SLVAGHGELIVLVPFARKSVQYSPVAVPGQEQSANPPISSEVAAGANSAWKDIMDDLSSI 124

Query: 388 VERNRNNKGLYEIPKKDESRNGLVGDVINGGKS 486
                 +    ++P           + ++ GK+
Sbjct: 125 PSSPHADVASKDLPSLSTLCGSSYAEDVSTGKT 157