BLASTX nr result

ID: Coptis24_contig00015827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015827
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia...   135   5e-30
gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia...   135   5e-30
emb|CAP66260.1| pathogenesis-related protein 1a [Beta vulgaris]       134   6e-30
gb|AFK93500.1| pathogenesis related protein 1 isoform 1 [Ficus p...   134   1e-29
gb|AFK38989.1| unknown [Medicago truncatula]                          133   1e-29

>gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 154

 Score =  135 bits (339), Expect = 5e-30
 Identities = 57/78 (73%), Positives = 68/78 (87%)
 Frame = +3

Query: 3   SDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICSTGGT 182
           S   ++GTAAV+MWVAEK +YDY SN+C+ G VCGHYTQVVWRNS R+GCAKV CS+GGT
Sbjct: 77  STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGCAKVRCSSGGT 136

Query: 183 FIICSYDPPGNFVGEKPY 236
           FI C+YDPPGN+VG+KPY
Sbjct: 137 FIGCNYDPPGNYVGQKPY 154


>gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia oblonga]
          Length = 153

 Score =  135 bits (339), Expect = 5e-30
 Identities = 57/78 (73%), Positives = 68/78 (87%)
 Frame = +3

Query: 3   SDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICSTGGT 182
           S   ++GTAAV+MWVAEK +YDY SN+C+ G VCGHYTQVVWRNS R+GCAKV CS+GGT
Sbjct: 76  STGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGCAKVRCSSGGT 135

Query: 183 FIICSYDPPGNFVGEKPY 236
           FI C+YDPPGN+VG+KPY
Sbjct: 136 FIGCNYDPPGNYVGQKPY 153


>emb|CAP66260.1| pathogenesis-related protein 1a [Beta vulgaris]
          Length = 168

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/74 (77%), Positives = 64/74 (86%)
 Frame = +3

Query: 15  LTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICSTGGTFIIC 194
           LT T AV MWVAEK +YDYNSNTC+SG VCGHYTQVVWR+SVRLGCA+V C  GG F+ C
Sbjct: 95  LTATTAVQMWVAEKADYDYNSNTCASGKVCGHYTQVVWRDSVRLGCARVQCDNGGIFVTC 154

Query: 195 SYDPPGNFVGEKPY 236
           +YDPPGNFVG+KPY
Sbjct: 155 NYDPPGNFVGQKPY 168


>gb|AFK93500.1| pathogenesis related protein 1 isoform 1 [Ficus pumila var.
           awkeotsang]
          Length = 165

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   SDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICSTGGT 182
           S   L+GT AV MWV EK NY+YNSN+C+SG VCGHYTQVVWR SVRLGCAKV C+ GGT
Sbjct: 88  SSGDLSGTDAVRMWVNEKANYNYNSNSCASGKVCGHYTQVVWRKSVRLGCAKVRCNNGGT 147

Query: 183 FIICSYDPPGNFVGEKPY 236
           FI C+YDPPGN+VG+KPY
Sbjct: 148 FIGCNYDPPGNYVGQKPY 165


>gb|AFK38989.1| unknown [Medicago truncatula]
          Length = 159

 Score =  133 bits (335), Expect = 1e-29
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = +3

Query: 3   SDSSLTGTAAVNMWVAEKQNYDYNSNTCSSGAVCGHYTQVVWRNSVRLGCAKVICSTGGT 182
           S   L+GT AV +WV EK +Y+YNSNTC+SG VCGHYTQVVWRN+ R+GCAKV C+ GGT
Sbjct: 82  STGDLSGTDAVRLWVNEKNDYNYNSNTCASGKVCGHYTQVVWRNTKRIGCAKVRCNNGGT 141

Query: 183 FIICSYDPPGNFVGEKPY 236
           FIIC+YDPPGN+VG+KPY
Sbjct: 142 FIICNYDPPGNYVGQKPY 159


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