BLASTX nr result
ID: Coptis24_contig00015823
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00015823
(662 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 327 2e-87
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch... 317 1e-84
ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 303 3e-80
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 300 2e-79
emb|CAB41128.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana] 300 2e-79
>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
[Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed
protein product [Vitis vinifera]
Length = 1071
Score = 327 bits (837), Expect = 2e-87
Identities = 159/220 (72%), Positives = 188/220 (85%)
Frame = +1
Query: 1 SMDSMFKKVDGKTEYVYLHVKESVQLALEVLAEDLPATIGKISFPKSMRWNSEVMFTRPI 180
S+DS++KKVDGKTEYVY+ V ES +LALEVL+EDLP I KISFPKSMRWNS+VMF+RPI
Sbjct: 485 SLDSLYKKVDGKTEYVYVRVMESARLALEVLSEDLPRIIAKISFPKSMRWNSQVMFSRPI 544
Query: 181 RWVLALHGDVVVPFTFAGVLSGNMSCGLRNTPSATIKVEHAEDYVRVMEKVGISINIEDR 360
RW+LALHGDVVVPF FAGVLSGN+S GLRNT SATIKVE AE Y V+ GIS++IE+R
Sbjct: 545 RWILALHGDVVVPFMFAGVLSGNLSYGLRNTSSATIKVESAESYATVIRNAGISLDIEER 604
Query: 361 KKNILDASNSLAKSVGGHLVNHSTLIEEVVNLVESPIPILGEFNESFLELPEDLLIMVMQ 540
K+ IL+ N+LAK V GH++ +L++EVVNLVE+P+P++G+F ESFLELP+DLL MVMQ
Sbjct: 605 KQTILEQCNALAKGVNGHILLQGSLLDEVVNLVEAPVPVIGKFKESFLELPKDLLTMVMQ 664
Query: 541 KHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 660
KHQKYF+I DD GRLLPYFI VANG IN VVRKGNEAVL
Sbjct: 665 KHQKYFAITDDSGRLLPYFITVANGAINEMVVRKGNEAVL 704
>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 1069
Score = 317 bits (812), Expect = 1e-84
Identities = 148/219 (67%), Positives = 186/219 (84%)
Frame = +1
Query: 4 MDSMFKKVDGKTEYVYLHVKESVQLALEVLAEDLPATIGKISFPKSMRWNSEVMFTRPIR 183
+DS+F+K DGKTEY+Y V E+ +LALE+L++DLP I +ISFPK+MRWNS+VMF+RPIR
Sbjct: 484 LDSLFRKADGKTEYIYARVTEAARLALEILSKDLPVAISRISFPKTMRWNSQVMFSRPIR 543
Query: 184 WVLALHGDVVVPFTFAGVLSGNMSCGLRNTPSATIKVEHAEDYVRVMEKVGISINIEDRK 363
W++ALHGD+VVPF +AGVLSGN+S GLRNTPSAT++VE+AE Y +M GI I IE+RK
Sbjct: 544 WIMALHGDLVVPFIYAGVLSGNISYGLRNTPSATVEVENAESYASIMRNAGIHIEIEERK 603
Query: 364 KNILDASNSLAKSVGGHLVNHSTLIEEVVNLVESPIPILGEFNESFLELPEDLLIMVMQK 543
++IL+ SN+LAKSV GH++ L+ EVVNLVE+P P+LG+F ESFLELP+DLL MVMQK
Sbjct: 604 RSILEHSNALAKSVNGHIIIQENLLNEVVNLVEAPFPVLGKFKESFLELPKDLLTMVMQK 663
Query: 544 HQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 660
HQKYF++ D+ G+LLPYFIAVANG IN VVRKGNEAVL
Sbjct: 664 HQKYFAVTDETGKLLPYFIAVANGAINEMVVRKGNEAVL 702
>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
[Glycine max]
Length = 1074
Score = 303 bits (775), Expect = 3e-80
Identities = 147/219 (67%), Positives = 185/219 (84%)
Frame = +1
Query: 4 MDSMFKKVDGKTEYVYLHVKESVQLALEVLAEDLPATIGKISFPKSMRWNSEVMFTRPIR 183
+D +++KVDGKTEYVY +KES + ALEVL+EDLPATI KISFPK+MRWNS+VMF+RPIR
Sbjct: 489 LDLVYRKVDGKTEYVYARIKESSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIR 548
Query: 184 WVLALHGDVVVPFTFAGVLSGNMSCGLRNTPSATIKVEHAEDYVRVMEKVGISINIEDRK 363
W+LALHGDVVVPF FAGV SGN+S GLRNT SA I+VE AE Y ++ VGI++++EDRK
Sbjct: 549 WILALHGDVVVPFMFAGVTSGNLSFGLRNTSSAVIQVESAESYSVSIKNVGINVSVEDRK 608
Query: 364 KNILDASNSLAKSVGGHLVNHSTLIEEVVNLVESPIPILGEFNESFLELPEDLLIMVMQK 543
K I + SN+LA+SV G ++ L++EVVNLVE+P P+LG+F E+FL+LP+DLL MVMQK
Sbjct: 609 KIIFEQSNALAESVNGQILIPKGLLDEVVNLVEAPFPVLGKFKETFLDLPKDLLTMVMQK 668
Query: 544 HQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 660
HQKYF++ D +G+LLPYF+AVANG I+ T VRKGNEAVL
Sbjct: 669 HQKYFAVCDANGQLLPYFVAVANGAIDETTVRKGNEAVL 707
>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 1068
Score = 300 bits (768), Expect = 2e-79
Identities = 145/220 (65%), Positives = 183/220 (83%)
Frame = +1
Query: 1 SMDSMFKKVDGKTEYVYLHVKESVQLALEVLAEDLPATIGKISFPKSMRWNSEVMFTRPI 180
S +S++KK+DGKTEY+Y V ES + ALE+ +E+LP I KISFPKSMRWNS+V+F+RPI
Sbjct: 482 SRESLYKKIDGKTEYLYASVMESSRHALEIFSENLPGIIAKISFPKSMRWNSQVVFSRPI 541
Query: 181 RWVLALHGDVVVPFTFAGVLSGNMSCGLRNTPSATIKVEHAEDYVRVMEKVGISINIEDR 360
RW+LALHGDVVVPF++AGVLSGN+S GLRNT +A +KV+ AE ++ M+ I + +EDR
Sbjct: 542 RWILALHGDVVVPFSYAGVLSGNISYGLRNTSTAIVKVDSAESFMGAMKDAKIDLEVEDR 601
Query: 361 KKNILDASNSLAKSVGGHLVNHSTLIEEVVNLVESPIPILGEFNESFLELPEDLLIMVMQ 540
K+ ILD S+ LA+S+ G V H L++EVVNLVE+P+ ILG+FN+SFLELPEDLL MVMQ
Sbjct: 602 KRKILDQSSMLAQSINGKTVIHEDLLDEVVNLVETPVSILGKFNDSFLELPEDLLTMVMQ 661
Query: 541 KHQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 660
KHQKYFSIR+ DG+L+PYFIAVANG I+ VVRKGNEAVL
Sbjct: 662 KHQKYFSIRNADGKLMPYFIAVANGEIDDKVVRKGNEAVL 701
>emb|CAB41128.1| aminoacyl-t-RNA synthetase [Arabidopsis thaliana]
Length = 1067
Score = 300 bits (768), Expect = 2e-79
Identities = 146/219 (66%), Positives = 180/219 (82%)
Frame = +1
Query: 4 MDSMFKKVDGKTEYVYLHVKESVQLALEVLAEDLPATIGKISFPKSMRWNSEVMFTRPIR 183
++ +++KV GKTEYV+ V E +LALEVL+EDLP + KISFPKSMRWNS VMF+RPIR
Sbjct: 482 LEKLYRKVSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPIR 541
Query: 184 WVLALHGDVVVPFTFAGVLSGNMSCGLRNTPSATIKVEHAEDYVRVMEKVGISINIEDRK 363
WV+ALHGD+VVPF+FAG+ SGN+SCGLRNT SA++ V++AE Y M GI+I IE+RK
Sbjct: 542 WVMALHGDLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERK 601
Query: 364 KNILDASNSLAKSVGGHLVNHSTLIEEVVNLVESPIPILGEFNESFLELPEDLLIMVMQK 543
K IL+ SN+LAKSV G LV L+ EV NLVE+P+P++G+F ESFLELPE+LL +VMQK
Sbjct: 602 KIILEKSNALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQK 661
Query: 544 HQKYFSIRDDDGRLLPYFIAVANGMINPTVVRKGNEAVL 660
HQKYFSI D+ G+LLPYFIAVANG IN VV+KGNEAVL
Sbjct: 662 HQKYFSIIDESGQLLPYFIAVANGAINEDVVKKGNEAVL 700