BLASTX nr result
ID: Coptis24_contig00015816
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015816 (786 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 55 1e-15 ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatu... 55 7e-15 ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V... 54 2e-14 ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatu... 54 3e-14 ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 52 3e-14 >ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max] Length = 548 Score = 54.7 bits (130), Expect(2) = 1e-15 Identities = 27/44 (61%), Positives = 36/44 (81%) Frame = -2 Query: 785 MNTLGLFSSTTYS*VLQQLKEKALKRAGLTEEDVACFIEERVRA 654 ++ LGL SS +Y+ VLQQLK+KALKRAGLTE++V I+ER +A Sbjct: 426 LDVLGLLSSKSYAEVLQQLKDKALKRAGLTEDEVLHLIDERTQA 469 Score = 54.7 bits (130), Expect(2) = 1e-15 Identities = 22/35 (62%), Positives = 28/35 (80%) Frame = -3 Query: 652 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVPA 548 KD+AK D++R DL KGIAL D+GN TWRPC+P+ Sbjct: 473 KDFAKSDKMRADLATKGIALMDVGNEITWRPCIPS 507 >ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula] gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula] Length = 552 Score = 54.7 bits (130), Expect(2) = 7e-15 Identities = 22/35 (62%), Positives = 27/35 (77%) Frame = -3 Query: 652 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVPA 548 KD+AK D +R DL KGIAL D+GN T WRPC+P+ Sbjct: 481 KDFAKSDNVRTDLTAKGIALMDVGNETIWRPCIPS 515 Score = 52.0 bits (123), Expect(2) = 7e-15 Identities = 28/44 (63%), Positives = 34/44 (77%) Frame = -2 Query: 785 MNTLGLFSSTTYS*VLQQLKEKALKRAGLTEEDVACFIEERVRA 654 + LGL SS +Y+ VLQQLK+KALKRAGLTE +V IEER +A Sbjct: 434 LKVLGLLSSLSYAEVLQQLKDKALKRAGLTEVEVLKSIEERRQA 477 >ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera] gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera] Length = 513 Score = 53.5 bits (127), Expect(2) = 2e-14 Identities = 23/34 (67%), Positives = 27/34 (79%) Frame = -3 Query: 652 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVP 551 KD++KGD+IR DL KGIAL D+G T WRPCVP Sbjct: 468 KDFSKGDQIRADLASKGIALMDVGKETIWRPCVP 501 Score = 52.0 bits (123), Expect(2) = 2e-14 Identities = 27/46 (58%), Positives = 33/46 (71%) Frame = -2 Query: 785 MNTLGLFSSTTYS*VLQQLKEKALKRAGLTEEDVACFIEERVRAER 648 ++ LGL S+ YS VLQQLK KALKRAG+ E+DV IEER A + Sbjct: 421 LSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARK 466 >ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula] gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula] Length = 584 Score = 54.3 bits (129), Expect(2) = 3e-14 Identities = 28/44 (63%), Positives = 35/44 (79%) Frame = -2 Query: 785 MNTLGLFSSTTYS*VLQQLKEKALKRAGLTEEDVACFIEERVRA 654 + LGL SS +Y+ VLQQLK+KALKRAGLTE++V IEER +A Sbjct: 455 LKVLGLLSSLSYAEVLQQLKDKALKRAGLTEKEVLKLIEERKQA 498 Score = 50.4 bits (119), Expect(2) = 3e-14 Identities = 21/35 (60%), Positives = 25/35 (71%) Frame = -3 Query: 652 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVPA 548 KD+AK D IR DL KGIAL D+ N WRPC+P+ Sbjct: 502 KDFAKSDNIRTDLTAKGIALEDVDNEMIWRPCIPS 536 >ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max] Length = 553 Score = 52.4 bits (124), Expect(2) = 3e-14 Identities = 21/35 (60%), Positives = 27/35 (77%) Frame = -3 Query: 652 KDYAKGDRIRLDLYVKGIALGDLGNHTTWRPCVPA 548 KD+AK D++R DL KGIAL D+GN WRPC+P+ Sbjct: 473 KDFAKSDKMRADLATKGIALMDVGNEIIWRPCIPS 507 Score = 52.0 bits (123), Expect(2) = 3e-14 Identities = 26/44 (59%), Positives = 34/44 (77%) Frame = -2 Query: 785 MNTLGLFSSTTYS*VLQQLKEKALKRAGLTEEDVACFIEERVRA 654 ++ LGL SS +Y+ VL QLK+KAL RAGLTE++V IEER +A Sbjct: 426 LDVLGLLSSKSYAEVLHQLKDKALNRAGLTEDEVLHLIEERTQA 469