BLASTX nr result

ID: Coptis24_contig00015809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015809
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like ...    69   3e-10
emb|CBI25454.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like ...    67   1e-09
ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arab...    66   3e-09

>ref|XP_004160727.1| PREDICTED: transcription factor bHLH51-like [Cucumis sativus]
          Length = 247

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 5/70 (7%)
 Frame = +2

Query: 188 ILPWPAQSSTPNFLAQG-YYPSSSSAS----VEDRGATASKSHSQAEKRRRERINGHLST 352
           +LPW      P F +   ++PS S+ S    VEDR A+ASKSHSQAEKRRR+RIN  L+T
Sbjct: 31  LLPWMIN---PQFSSSNEFFPSFSTPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLAT 87

Query: 353 LRRLVPRSEK 382
           LR+L+P+S+K
Sbjct: 88  LRKLIPKSDK 97


>emb|CBI25454.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 47/102 (46%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
 Frame = +2

Query: 104 LFMEKLSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASV 268
           L ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + 
Sbjct: 44  LDMENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMAT 98

Query: 269 EDRG----ATASKSHSQAEKRRRERINGHLSTLRRLVPRSEK 382
           EDR     ATASKSHSQAEKRRR+RIN  L+TLR+L+P+SEK
Sbjct: 99  EDRSDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEK 140


>ref|XP_002316199.1| predicted protein [Populus trichocarpa] gi|222865239|gb|EEF02370.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 4/75 (5%)
 Frame = +2

Query: 170 VNNEPFILPWPAQSS-TPNFLAQGYYPSSS---SASVEDRGATASKSHSQAEKRRRERIN 337
           V +E F++P P+ +S + NF   G+ PS S     + ED+ A++SKSHSQAEKRRR+RIN
Sbjct: 25  VYDESFLVPCPSHASASANFQVYGF-PSWSVPLQEASEDKAASSSKSHSQAEKRRRDRIN 83

Query: 338 GHLSTLRRLVPRSEK 382
             L  LR+LVP+SEK
Sbjct: 84  AQLGILRKLVPKSEK 98


>ref|XP_002272668.2| PREDICTED: transcription factor bHLH51-like [Vitis vinifera]
          Length = 252

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
 Frame = +2

Query: 110 MEKLSRLGWSEEAGQFQYHEVNNEPFILPW-PAQSSTPNFLAQGYYPSSS----SASVED 274
           ME     GW++EA   Q         +LPW P    + +F   G+ PS S      + ED
Sbjct: 1   MENCLYSGWAQEADCTQCDAAP----VLPWLPPPHVSASFQFHGF-PSWSLPVEKMATED 55

Query: 275 RG----ATASKSHSQAEKRRRERINGHLSTLRRLVPRSEK 382
           R     ATASKSHSQAEKRRR+RIN  L+TLR+L+P+SEK
Sbjct: 56  RSDERTATASKSHSQAEKRRRDRINAQLATLRKLIPKSEK 95


>ref|XP_002862876.1| hypothetical protein ARALYDRAFT_497265 [Arabidopsis lyrata subsp.
           lyrata] gi|297308638|gb|EFH39135.1| hypothetical protein
           ARALYDRAFT_497265 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 11/78 (14%)
 Frame = +2

Query: 182 PFILPWPAQSSTPN-----------FLAQGYYPSSSSASVEDRGATASKSHSQAEKRRRE 328
           P+++ W  QS +P+           F + GY+P+       ++  + S+SH QAEKRRR+
Sbjct: 16  PYMVSWSLQSESPDSDWSRFNLGFSFSSSGYFPADDCVGGIEKAESLSRSHRQAEKRRRD 75

Query: 329 RINGHLSTLRRLVPRSEK 382
           RIN HL+ LR+LVP S+K
Sbjct: 76  RINSHLTALRKLVPNSDK 93


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