BLASTX nr result

ID: Coptis24_contig00015769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015769
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273698.2| PREDICTED: charged multivesicular body prote...   364   3e-98
emb|CBI37046.3| unnamed protein product [Vitis vinifera]              364   3e-98
emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]   349   1e-93
ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] g...   342   1e-91
ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2...   332   2e-88

>ref|XP_002273698.2| PREDICTED: charged multivesicular body protein 7 [Vitis vinifera]
          Length = 478

 Score =  364 bits (934), Expect = 3e-98
 Identities = 201/392 (51%), Positives = 274/392 (69%), Gaps = 2/392 (0%)
 Frame = +1

Query: 232  FKFRRNLFGELQLIIKFLNLLANQRVNDWFNRGGLTPLSIDRVLMRFSFSLGLIFQNPFQ 411
            ++F R+L  ++      L + ++Q   DWFNRGGLTPL +D VL                
Sbjct: 81   YQFWRDLILKVARHFHLLFISSSQVKKDWFNRGGLTPLCLDHVLFL-------------- 126

Query: 412  LEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGISTSSSAPQEDRFILRTLLAERAGE 585
              MYN G+ +RS +  D TSGRLSQLF++V H +  STS+    ED  IL  LL ++  E
Sbjct: 127  --MYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVRSTSAEVMFEDHLILLPLLKDKTVE 184

Query: 586  VIRCLSESHWTSFCIITVEKFHTICNANASNDASAILTYLSSNGKARLLSISKMDFIQGV 765
            V++ LSES WTS C+IT++KF  IC    + +ASA+L+YLS  GKA+ LSISK + I+GV
Sbjct: 185  VVKVLSESQWTSSCVITMKKFQDICGG--TREASAVLSYLSGCGKAQYLSISKKELIEGV 242

Query: 766  KVSLVPAAVATVSTFDCNLLHLIWTSEKLHQQLDVIDRRCEMSRSSALASVKSGNKQVAL 945
            KVSL  AAV+  ++ D ++LHL WT+E L QQLDVID+RCE+S+ +ALAS+ SGNK+VAL
Sbjct: 243  KVSLSAAAVSGTTSLDLDVLHLTWTTENLQQQLDVIDQRCEVSKKAALASLNSGNKKVAL 302

Query: 946  RHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKECGISMEEV 1125
            RH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEAIQIGA+AI+E  I +EEV
Sbjct: 303  RHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQENRIDVEEV 362

Query: 1126 QHCLEELDERVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEIELGDEIPIKQIFETV 1305
            Q CL+EL + + SQK+VEEAL  +  +Y  IEDED+EEEF+KLE+ELG++     + +  
Sbjct: 363  QRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQILVSQAG 422

Query: 1306 ADSSAVVQESLVSAGSVDKTVSNMKVADGASR 1401
             D++A   E+  S+ S+   +S++K+AD A+R
Sbjct: 423  VDTAAGETEASESSKSLCDALSDLKLADNATR 454


>emb|CBI37046.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  364 bits (934), Expect = 3e-98
 Identities = 201/392 (51%), Positives = 274/392 (69%), Gaps = 2/392 (0%)
 Frame = +1

Query: 232  FKFRRNLFGELQLIIKFLNLLANQRVNDWFNRGGLTPLSIDRVLMRFSFSLGLIFQNPFQ 411
            ++F R+L  ++      L + ++Q   DWFNRGGLTPL +D VL                
Sbjct: 41   YQFWRDLILKVARHFHLLFISSSQVKKDWFNRGGLTPLCLDHVLFL-------------- 86

Query: 412  LEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGISTSSSAPQEDRFILRTLLAERAGE 585
              MYN G+ +RS +  D TSGRLSQLF++V H +  STS+    ED  IL  LL ++  E
Sbjct: 87   --MYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVRSTSAEVMFEDHLILLPLLKDKTVE 144

Query: 586  VIRCLSESHWTSFCIITVEKFHTICNANASNDASAILTYLSSNGKARLLSISKMDFIQGV 765
            V++ LSES WTS C+IT++KF  IC    + +ASA+L+YLS  GKA+ LSISK + I+GV
Sbjct: 145  VVKVLSESQWTSSCVITMKKFQDICGG--TREASAVLSYLSGCGKAQYLSISKKELIEGV 202

Query: 766  KVSLVPAAVATVSTFDCNLLHLIWTSEKLHQQLDVIDRRCEMSRSSALASVKSGNKQVAL 945
            KVSL  AAV+  ++ D ++LHL WT+E L QQLDVID+RCE+S+ +ALAS+ SGNK+VAL
Sbjct: 203  KVSLSAAAVSGTTSLDLDVLHLTWTTENLQQQLDVIDQRCEVSKKAALASLNSGNKKVAL 262

Query: 946  RHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKECGISMEEV 1125
            RH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEAIQIGA+AI+E  I +EEV
Sbjct: 263  RHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQENRIDVEEV 322

Query: 1126 QHCLEELDERVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEIELGDEIPIKQIFETV 1305
            Q CL+EL + + SQK+VEEAL  +  +Y  IEDED+EEEF+KLE+ELG++     + +  
Sbjct: 323  QRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQILVSQAG 382

Query: 1306 ADSSAVVQESLVSAGSVDKTVSNMKVADGASR 1401
             D++A   E+  S+ S+   +S++K+AD A+R
Sbjct: 383  VDTAAGETEASESSKSLCDALSDLKLADNATR 414


>emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]
          Length = 418

 Score =  349 bits (895), Expect = 1e-93
 Identities = 186/350 (53%), Positives = 257/350 (73%), Gaps = 2/350 (0%)
 Frame = +1

Query: 358  VLMRFSFSLGLIFQNPFQLEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGISTSSSA 531
            ++++ +    L+F +P Q  MYN G+ +RS +  D TSGRLSQLF++V H +   TS+  
Sbjct: 47   LILKVARHFHLLFISPSQFLMYNEGDIIRSVDLVDPTSGRLSQLFRKVKHMMVRPTSAEV 106

Query: 532  PQEDRFILRTLLAERAGEVIRCLSESHWTSFCIITVEKFHTICNANASNDASAILTYLSS 711
              ED  IL  LL ++  EV++ LSES WTS C+IT++KF  IC    + +ASA+L+YLS 
Sbjct: 107  MFEDHLILLPLLKDKTVEVVKVLSESQWTSSCVITMKKFQDICGG--TREASAVLSYLSG 164

Query: 712  NGKARLLSISKMDFIQGVKVSLVPAAVATVSTFDCNLLHLIWTSEKLHQQLDVIDRRCEM 891
             GKA+ LSISK + I+GVKVSL  AAV+  ++ D ++LHL WT+E L QQLDVID+RCE+
Sbjct: 165  CGKAQYLSISKKELIEGVKVSLSTAAVSGTTSLDLDILHLTWTTENLQQQLDVIDQRCEV 224

Query: 892  SRSSALASVKSGNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEA 1071
            S+ +ALAS+ SGNK+VALRH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEA
Sbjct: 225  SKKAALASLNSGNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEA 284

Query: 1072 IQIGAKAIKECGISMEEVQHCLEELDERVSSQKEVEEALGSAALAYTGIEDEDVEEEFKK 1251
            IQIGA+AIKE  I +EEVQ CL+EL + + SQK+V+EAL  +  +Y  IEDED+EEEF+K
Sbjct: 285  IQIGAQAIKENRIDVEEVQRCLQELGDSIDSQKQVQEALAESDPSYADIEDEDIEEEFRK 344

Query: 1252 LEIELGDEIPIKQIFETVADSSAVVQESLVSAGSVDKTVSNMKVADGASR 1401
            LE+ELG++ P   + +   D++A   E+  S+ S+   +S++K+AD A+R
Sbjct: 345  LELELGNQNPQILVSQAGVDTAAGETEASESSKSLCDALSDLKLADNAAR 394


>ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis]
            gi|223545649|gb|EEF47153.1| Protein CHMP7, putative
            [Ricinus communis]
          Length = 438

 Score =  342 bits (877), Expect = 1e-91
 Identities = 188/389 (48%), Positives = 266/389 (68%), Gaps = 3/389 (0%)
 Frame = +1

Query: 232  FKFRRNLFGELQLIIKFLNLLANQRVNDWFNRGGLTPLSIDRVLMRFSFSLGLIFQNPFQ 411
            ++F RNL  ++   +    +   Q  N+WFNRGGLTPL +D VL                
Sbjct: 41   YQFWRNLILKIARHLGLFTIRPCQVKNEWFNRGGLTPLCLDHVLFL-------------- 86

Query: 412  LEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGISTSS-SAPQEDRFILRTLLAERAG 582
              MY  G+ +R+ +  D TSGR SQL+++V + +  ST++     ED  IL  LL E+A 
Sbjct: 87   --MYTEGDIIRNVDVVDATSGRFSQLYRKVTNLVIRSTTTPDLLLEDNLILTPLLKEKAD 144

Query: 583  EVIRCLSESHWTSFCIITVEKFHTICNANASNDASAILTYLSSNGKARLLSISKMDFIQG 762
            +VI+ LSE+HWT+ C++T+ KF  +C     N+AS +L+Y S  GKA+ LS+ K +F++G
Sbjct: 145  QVIKLLSENHWTTSCVVTMRKFQDMCGG--PNEASVVLSYFSGVGKAQYLSVCKKEFVEG 202

Query: 763  VKVSLVPAAVATVSTFDCNLLHLIWTSEKLHQQLDVIDRRCEMSRSSALASVKSGNKQVA 942
            +KVSL  A V  +S+ D ++LHLIWT+EKL QQ+DVID+R E+SR+SALA +KSGNK++A
Sbjct: 203  IKVSLSSALVPAISSLDFDVLHLIWTAEKLQQQIDVIDQRYELSRNSALAYLKSGNKKMA 262

Query: 943  LRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKECGISMEE 1122
            LRH R +KL+S+SRE+CTSL NRVEEVLN+I +AESTKKV+EAIQIGA+A+K+  I++EE
Sbjct: 263  LRHARDMKLASDSREKCTSLFNRVEEVLNIIADAESTKKVTEAIQIGAQAMKQNKITVEE 322

Query: 1123 VQHCLEELDERVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEIELGDEIPIKQIFET 1302
            V  CLEEL+E + SQK+VE+AL S   +YT IEDED+EEEFKKLE+E+G       +   
Sbjct: 323  VDLCLEELEENIDSQKQVEKALESTP-SYTVIEDEDIEEEFKKLEMEVGTVDLQSPVPRI 381

Query: 1303 VADSSAVVQESLVSAGSVDKTVSNMKVAD 1389
               S++   ++ VS  S+   +SN+K+ D
Sbjct: 382  GMSSTSGETDNSVSTDSLSDALSNLKLQD 410


>ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  332 bits (850), Expect = 2e-88
 Identities = 190/394 (48%), Positives = 270/394 (68%), Gaps = 4/394 (1%)
 Frame = +1

Query: 232  FKFRRNLFGELQLIIKFLNLLANQRVNDWFNRGGLTPLSIDRVLMRFSFSLGLIFQNPFQ 411
            + F ++L  ++   +    +  +Q    WFNRGGLTPL +D VL                
Sbjct: 42   YLFWKDLILKIARHLDLFIIQPSQVKEKWFNRGGLTPLCLDHVLCL-------------- 87

Query: 412  LEMYNTGEALRSEE--DTTSGRLSQLFKRVVHSIGIS--TSSSAPQEDRFILRTLLAERA 579
              MYN G+ +R+ +  D +SGR+SQLF++V + +  S  T      ED   L  LL ++ 
Sbjct: 88   --MYNEGDIVRNVDLVDPSSGRISQLFRKVRNLMVRSPVTPEIIMLEDHLFLTPLLKDKT 145

Query: 580  GEVIRCLSESHWTSFCIITVEKFHTICNANASNDASAILTYLSSNGKARLLSISKMDFIQ 759
             ++I+CLSESHWTS CIIT+ KF  +C     ++A+ +L+YLS  GKA+  SISK + I+
Sbjct: 146  AQIIKCLSESHWTSSCIITMSKFQGMCGG--PSEAAPLLSYLSGLGKAQYFSISK-EVIE 202

Query: 760  GVKVSLVPAAVATVSTFDCNLLHLIWTSEKLHQQLDVIDRRCEMSRSSALASVKSGNKQV 939
            GVK+SL  A+V  +S+ D ++LHLIWT++KL  Q+DVIDRR EMSR SALAS+ SGNK+V
Sbjct: 203  GVKISLSSASVPAISSLDLDVLHLIWTAQKLEDQIDVIDRRYEMSRKSALASLNSGNKKV 262

Query: 940  ALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKECGISME 1119
            ALRH R++KL+ ESRERCTSLLNRVEEVLNVI NAEST+KV+EAI+IGA+A+K+  I++E
Sbjct: 263  ALRHAREMKLALESRERCTSLLNRVEEVLNVIANAESTQKVTEAIRIGAEAMKQNKITVE 322

Query: 1120 EVQHCLEELDERVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEIELGDEIPIKQIFE 1299
            EV++CLEEL+E + +QK+VE+AL S  +  +GIEDED+EEE +KLE+EL  E    QI +
Sbjct: 323  EVENCLEELEESIDAQKQVEKALESNPI--SGIEDEDIEEELEKLELELESE--NLQISK 378

Query: 1300 TVADSSAVVQESLVSAGSVDKTVSNMKVADGASR 1401
                +++   ++L S  S+   +SN+K+ DG++R
Sbjct: 379  VEVGNTSGEMDALGSPDSLTDALSNLKLHDGSAR 412


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