BLASTX nr result

ID: Coptis24_contig00015767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015767
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270228.2| PREDICTED: uncharacterized oxidoreductase yk...   390   e-106
ref|XP_004149969.1| PREDICTED: uncharacterized oxidoreductase Yk...   389   e-106
ref|XP_002299666.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
ref|XP_002529281.1| 3-hydroxyisobutyrate dehydrogenase, putative...   375   e-101
ref|XP_003629977.1| 6-phosphogluconate dehydrogenase NAD-binding...   366   8e-99

>ref|XP_002270228.2| PREDICTED: uncharacterized oxidoreductase ykwC-like [Vitis vinifera]
          Length = 375

 Score =  390 bits (1003), Expect = e-106
 Identities = 191/299 (63%), Positives = 242/299 (80%), Gaps = 3/299 (1%)
 Frame = +2

Query: 302  KSVNPSDIHVGWIGIGVMGGAMASRILTAGYKVTVFARTPEKALFLKNQGAQIATSLSEV 481
            K +N +   VG++GIGVMG AMASRIL AGY +TV+AR P KAL L++QGAQ+A S + +
Sbjct: 73   KPINTAQTRVGFVGIGVMGAAMASRILAAGYFLTVYARNPSKALTLQSQGAQLADSPASL 132

Query: 482  ASVSDVVFTMVGHPSDVSSVVLGDQGVLSSLSKGGVIVDHTSSEPQLAKEIATTALSKGC 661
            A  SDVVFTM+GHPSDV  +VLG  G+LS L+ GGV+VD TSS P LA+EI   A  K C
Sbjct: 133  ARQSDVVFTMLGHPSDVRQIVLGPNGILSGLNPGGVLVDTTSSHPGLAREIYAAAREKNC 192

Query: 662  WAIDAPVSGGDIGAKEGKLAIFAGGDYNVVKWLTPLFEIMGRPTYVGESGCGMSCKIANQ 841
            W++D+PVSGGDIGA++GKLAI AGGD  VV+WLTPL+ +MG+ TYVG  GCGMSCKIANQ
Sbjct: 193  WSVDSPVSGGDIGARDGKLAILAGGDSGVVEWLTPLYNVMGKGTYVGAPGCGMSCKIANQ 252

Query: 842  ITVSANLVGLSEGLTFAKQTGLDLRQYMNSIRGGAAGSKVMEIFGERMIERDFIGGSFAE 1021
            + V+AN++GLSEGL FA++ GLD +Q+M+++RGGAAGSK ME+FG RMIERDF  G +AE
Sbjct: 253  MIVAANMLGLSEGLVFAERAGLDKQQWMDAVRGGAAGSKAMELFGGRMIERDFRPGGYAE 312

Query: 1022 YVVKDLGMGLEVKE---DKVVVLPGAALSKQLFLSMVANGDEKMGMQGLVTVIERMNGK 1189
            Y+VKDLGMG+++ E   ++V VLPGAAL+KQLF  MVANGD K+G QG ++VIE+MNG+
Sbjct: 313  YMVKDLGMGVDIVEEDDERVAVLPGAALNKQLFEVMVANGDGKLGAQGFISVIEKMNGR 371


>ref|XP_004149969.1| PREDICTED: uncharacterized oxidoreductase YkwC-like [Cucumis sativus]
          Length = 306

 Score =  389 bits (1000), Expect = e-106
 Identities = 185/298 (62%), Positives = 242/298 (81%), Gaps = 4/298 (1%)
 Frame = +2

Query: 308  VNPSDIHVGWIGIGVMGGAMASRILTAGYKVTVFARTPEKALFLKNQGAQIATSLSEVAS 487
            ++P+   +GWIGIGVMG AMA+R+L+AGY ++++ARTP KAL L+++GA +  S+ ++A 
Sbjct: 9    ISPTKTRIGWIGIGVMGAAMATRLLSAGYSLSIYARTPSKALDLQSKGALLVNSVLQLAQ 68

Query: 488  VSDVVFTMVGHPSDVSSVVLGDQGVLSSLSKGGVIVDHTSSEPQLAKEIATTALSKGCWA 667
             SD+VFTMVGHPSDV   VL + G+L  L+ GGV+VD TSS P LA++I   A +KGCWA
Sbjct: 69   TSDIVFTMVGHPSDVRQNVLDENGILQGLNPGGVVVDTTSSHPALARDIFIAARAKGCWA 128

Query: 668  IDAPVSGGDIGAKEGKLAIFAGGDYNVVKWLTPLFEIMGRPTYVGESGCGMSCKIANQIT 847
            +DAPVSGGDIGA++GKLAIF GGD  VV WL PLFE++G+ TYVGE+GCG SCKIANQ  
Sbjct: 129  VDAPVSGGDIGARDGKLAIFGGGDEGVVNWLLPLFEVLGKVTYVGEAGCGQSCKIANQFP 188

Query: 848  VSANLVGLSEGLTFAKQTGLDLRQYMNSIRGGAAGSKVMEIFGERMIERDFIGGSFAEYV 1027
            +SANL+GLSEGL FA++ GLD+++++ ++RGG A S  ME+FGERMI RDF  G FAEY+
Sbjct: 189  ISANLLGLSEGLVFAERAGLDMKKFVEAVRGGGAWSMAMELFGERMIGRDFRPGGFAEYM 248

Query: 1028 VKDLGMGLEV----KEDKVVVLPGAALSKQLFLSMVANGDEKMGMQGLVTVIERMNGK 1189
            VKDLGMG++V    ++++VVVLPGAAL+KQLF +MVANGD K G QGL++VIER+NGK
Sbjct: 249  VKDLGMGVDVVEEGEDERVVVLPGAALTKQLFSAMVANGDGKFGNQGLISVIERLNGK 306


>ref|XP_002299666.1| predicted protein [Populus trichocarpa] gi|222846924|gb|EEE84471.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  381 bits (978), Expect = e-103
 Identities = 188/301 (62%), Positives = 243/301 (80%), Gaps = 5/301 (1%)
 Frame = +2

Query: 302  KSVNPSDIHVGWIGIGVMGGAMASRILTAGYKVTVFARTPEKALFLKNQGAQIATSLSEV 481
            +S++P    +GWIGIGVMG AMASR+L+AGY +T++AR+P KAL L+++GAQ+  S  +V
Sbjct: 7    ESISPGKTRIGWIGIGVMGAAMASRLLSAGYFITIYARSPSKALPLQSEGAQLVDSPYKV 66

Query: 482  ASVSDVVFTMVGHPSDVSSVVLG-DQGVLSSLSKGGVIVDHTSSEPQLAKEIATTALSKG 658
            A  SDVVFTMVGHPSDV SVVL  + G+L+ L+ GGVIVD T+S P  A+EI   A +KG
Sbjct: 67   AKCSDVVFTMVGHPSDVRSVVLDTNHGILAGLNPGGVIVDSTTSSPAQAREIFQAAKAKG 126

Query: 659  CWAIDAPVSGGDIGAKEGKLAIFAGGDYNVVKWLTPLFEIMGRPTYVGESGCGMSCKIAN 838
            C +ID+PVSGGDIGA++GKLAIFAGGD  VV WL+PL+E++G+ TY+G++GCG SCKIAN
Sbjct: 127  CHSIDSPVSGGDIGARDGKLAIFAGGDQVVVNWLSPLYEVLGKVTYMGQAGCGQSCKIAN 186

Query: 839  QITVSANLVGLSEGLTFAKQTGLDLRQYMNSIRGGAAGSKVMEIFGERMIERDFIGGSFA 1018
            QI V ANL+GLSEGL FA + GLD R++++++R GAAGS VME+FG RMI+RDF  G FA
Sbjct: 187  QIVVGANLLGLSEGLVFADKAGLDARKFLDAVRTGAAGSMVMELFGGRMIDRDFKAGGFA 246

Query: 1019 EYVVKDLGMGLEV----KEDKVVVLPGAALSKQLFLSMVANGDEKMGMQGLVTVIERMNG 1186
            EY+VKD+GMG++V    ++++V VLPGAAL KQLF  MVANGD  +G Q L+TVIER+NG
Sbjct: 247  EYMVKDMGMGVDVVEESEDERVPVLPGAALGKQLFAGMVANGDGNLGTQALITVIERLNG 306

Query: 1187 K 1189
            K
Sbjct: 307  K 307


>ref|XP_002529281.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]
            gi|223531270|gb|EEF33113.1| 3-hydroxyisobutyrate
            dehydrogenase, putative [Ricinus communis]
          Length = 308

 Score =  375 bits (964), Expect = e-101
 Identities = 188/299 (62%), Positives = 236/299 (78%), Gaps = 6/299 (2%)
 Frame = +2

Query: 311  NPSDIHVGWIGIGVMGGAMASRILTAGYKVTVFARTPEKALFLKNQGAQIATSLSEVASV 490
            +P+   +GWIGIGVMG AMASR+L+AGY +T+++RTP KAL L+++GA +A+S  EVA  
Sbjct: 10   SPTKTRIGWIGIGVMGAAMASRLLSAGYSLTIYSRTPSKALKLQSKGAILASSPLEVAKN 69

Query: 491  SDVVFTMVGHPSDVSSVVLGDQG--VLSSLSKGGVIVDHTSSEPQLAKEIATTALSKGCW 664
            SD+V TMVGHPSDV S+VL +QG  +L  L  GGVI+D TSS P LA+EI  +A  KGCW
Sbjct: 70   SDIVCTMVGHPSDVRSIVLENQGKSILDGLHHGGVIIDFTSSHPALAREIFASAREKGCW 129

Query: 665  AIDAPVSGGDIGAKEGKLAIFAGGDYNVVKWLTPLFEIMGRPTYVGESGCGMSCKIANQI 844
            A+D+PVSGGDIGA++GKLAIF GGD  V+ WL P+FE++G+ TY+G  G G SCKIANQI
Sbjct: 130  AVDSPVSGGDIGARDGKLAIFGGGDEIVINWLLPIFEVLGKVTYMGPPGRGQSCKIANQI 189

Query: 845  TVSANLVGLSEGLTFAKQTGLDLRQYMNSIRGGAAGSKVMEIFGERMIERDFIGGSFAEY 1024
             V ANL+GLSEGL FA++ GLD++Q+M+S+RGGAAGS VME+FGERMI RDF  G FAEY
Sbjct: 190  VVGANLLGLSEGLVFAEKVGLDVKQWMDSVRGGAAGSMVMELFGERMIGRDFRPGGFAEY 249

Query: 1025 VVKDLGMGLEVKED----KVVVLPGAALSKQLFLSMVANGDEKMGMQGLVTVIERMNGK 1189
            +VKD+GM ++V E+     V VL GAAL KQLF  MV NGD  +G QGL+TVIER+NGK
Sbjct: 250  MVKDMGMAVDVVEESEDGSVPVLLGAALCKQLFAGMVGNGDGHLGTQGLITVIERLNGK 308


>ref|XP_003629977.1| 6-phosphogluconate dehydrogenase NAD-binding domain-containing
            protein [Medicago truncatula] gi|355523999|gb|AET04453.1|
            6-phosphogluconate dehydrogenase NAD-binding
            domain-containing protein [Medicago truncatula]
          Length = 372

 Score =  366 bits (939), Expect = 8e-99
 Identities = 181/298 (60%), Positives = 236/298 (79%), Gaps = 5/298 (1%)
 Frame = +2

Query: 308  VNPSDIHVGWIGIGVMGGAMASRILTAGYKVTVFARTPE--KALFLKNQGAQIATSLSEV 481
            +  S   +GWIGIGVMGGAMASR+++AGY +T +AR P    +L L++ GA++A S S +
Sbjct: 9    ITTSTTRIGWIGIGVMGGAMASRLISAGYTLTFYARNPSHPNSLSLQSLGAKLANSPSHL 68

Query: 482  ASVSDVVFTMVGHPSDVSSVVLGDQGVLSSLSKGGVIVDHTSSEPQLAKEIATTALSKGC 661
            A+ SDVVFTM+GHPSDV S+ L   GV+SSL+   V VD TSS P LAKEI+  A +K  
Sbjct: 69   ANSSDVVFTMLGHPSDVKSIYLDKNGVVSSLNPNTVTVDTTSSHPDLAKEISVAARAKSA 128

Query: 662  WAIDAPVSGGDIGAKEGKLAIFAGGDYNVVKWLTPLFEIMGRPTYVGESGCGMSCKIANQ 841
            W+IDAPVSGGDIGA++GKLAIFA G+  VV+WL PLFEIMG+ TY+G +GCG SCKIANQ
Sbjct: 129  WSIDAPVSGGDIGARDGKLAIFAAGEAAVVEWLQPLFEIMGKATYLGPAGCGQSCKIANQ 188

Query: 842  ITVSANLVGLSEGLTFAKQTGLDLRQYMNSIRGGAAGSKVMEIFGERMIERDFIGGSFAE 1021
            IT+ ANL+GLSEGL FAK++G+DL Q++++I+ GAAG+K +E+FG+RMI +DF  G +AE
Sbjct: 189  ITIGANLIGLSEGLVFAKRSGIDLEQFLDAIKNGAAGTKALELFGKRMINKDFRPGGYAE 248

Query: 1022 YVVKDLGMG---LEVKEDKVVVLPGAALSKQLFLSMVANGDEKMGMQGLVTVIERMNG 1186
            Y VKDLGMG   +E  +D+VVVLPGA+L KQ+F  MVANGD K+G QG+++VI+R+NG
Sbjct: 249  YQVKDLGMGVNFVEGDDDEVVVLPGASLVKQIFTGMVANGDGKLGGQGVISVIDRING 306


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