BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015757
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]    56   1e-11
emb|CAN67963.1| hypothetical protein VITISV_027812 [Vitis vinifera]    60   4e-11
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    57   3e-10
emb|CAN75273.1| hypothetical protein VITISV_043734 [Vitis vinifera]    55   3e-10
gb|ABA94767.2| retrotransposon protein, putative, unclassified [...    51   4e-10

>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score = 55.8 bits (133), Expect(3) = 1e-11
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = -2

Query: 897 QSLIHTDTWSLVPYSPRQNLVGSI*VFKIKYNADGSIGRHKARFVAK 757
           ++L+  DTW LVPY P+ N+VG+  VFK+K++ D ++ +HKA  VAK
Sbjct: 298 KALMRNDTWDLVPYQPQYNVVGNKWVFKLKFHLDDTLNKHKASLVAK 344



 Score = 35.8 bits (81), Expect(3) = 1e-11
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
 Frame = -1

Query: 745 GLDYSETYNSVAKLFTIK---SITLQFD*PIKKLDVNSNFLHKNLKEGSF 605
           G+D+SETY+   KL TI+   ++ +     I++LD+N+ FL+  L+E  F
Sbjct: 351 GVDFSETYSPAIKLATIRVVLTLAIAQGWEIRQLDINNAFLNGYLQENVF 400



 Score = 24.6 bits (52), Expect(3) = 1e-11
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = -3

Query: 1085 PTQPTLRKQDHSCGIFKPKISSTTNHSLPQDLVAKLKDIPSTPTCYTQACKNLKQREAMA 906
            P  P + +     GIFKPK+ +   H L   L +        P C  Q   +   + AM 
Sbjct: 243  PCHPMITRA--KAGIFKPKVYAALKHPLSFSLGS------IEPMCVKQVLADPNWKIAMK 294

Query: 905  LEY 897
             EY
Sbjct: 295  EEY 297


>emb|CAN67963.1| hypothetical protein VITISV_027812 [Vitis vinifera]
          Length = 396

 Score = 60.5 bits (145), Expect(2) = 4e-11
 Identities = 25/47 (53%), Positives = 37/47 (78%)
 Frame = -2

Query: 897 QSLIHTDTWSLVPYSPRQNLVGSI*VFKIKYNADGSIGRHKARFVAK 757
           ++L+   TW LVPY P+ N+VG+  VFK+K++ DG++ +HKARFVAK
Sbjct: 140 KALMRNHTWDLVPYQPQYNVVGNKWVFKLKFHPDGTLNKHKARFVAK 186



 Score = 34.7 bits (78), Expect(2) = 4e-11
 Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
 Frame = -1

Query: 745 GLDYSETYNSVAKLFTIK---SITLQFD*PIKKLDVNSNFLHKNLKEGSF 605
           G+D+S TY+ V K  TI+   ++T+     I++LD+N+ FL++ L+E  F
Sbjct: 193 GVDFSITYSPVIKPATIRVVLTLTIAQGWEIRQLDINNAFLNRYLQEDVF 242


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 56.6 bits (135), Expect(2) = 3e-10
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = -2

Query: 882  TDTWSLVPYSPRQNLVGSI*VFKIKYNADGSIGRHKARFVAK 757
            T+TW+LVPYSP  N++GS+ VF+ K +ADGS+ + KAR VAK
Sbjct: 942  TETWTLVPYSPNMNVLGSMWVFRTKLHADGSLDKLKARLVAK 983



 Score = 35.4 bits (80), Expect(2) = 3e-10
 Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
 Frame = -1

Query: 784  KTQSQVCGQGKKQ--GLDYSETYNSVAKLFTIKSI-----TLQFD*PIKKLDVNSNFLHK 626
            K ++++  +G KQ  G+DY ETY+ V +  T++ I      L+++  +K++DV + FLH 
Sbjct: 975  KLKARLVAKGFKQEEGIDYLETYSPVVRTPTVRLILHVATVLKWE--LKQMDVKNAFLHG 1032

Query: 625  NLKE 614
            +L E
Sbjct: 1033 DLTE 1036


>emb|CAN75273.1| hypothetical protein VITISV_043734 [Vitis vinifera]
          Length = 1254

 Score = 55.5 bits (132), Expect(3) = 3e-10
 Identities = 25/47 (53%), Positives = 34/47 (72%)
 Frame = -2

Query: 897 QSLIHTDTWSLVPYSPRQNLVGSI*VFKIKYNADGSIGRHKARFVAK 757
           Q+L + DTW LVPY  + N+VG+  VFK+KYN D S+ ++K R VAK
Sbjct: 115 QALKNNDTWDLVPYKSKYNVVGNKWVFKLKYNYDCSLNKYKVRLVAK 161



 Score = 33.1 bits (74), Expect(3) = 3e-10
 Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
 Frame = -1

Query: 742 LDYSETYNSVAKLFTIK---SITLQFD*PIKKLDVNSNFLHKNLKEGSF 605
           +D+SETY+ V K FTI+   ++ +Q    I++LDVN+   + +L+E  +
Sbjct: 169 VDFSETYSLVIKPFTIRVVLALAMQQGWDIRQLDVNNALKNGHLQEDMY 217



 Score = 22.7 bits (47), Expect(3) = 3e-10
 Identities = 21/82 (25%), Positives = 33/82 (40%)
 Frame = -3

Query: 1247 HIQTHQLEIQHQTQAQSSGSTSPSAEIYLLA*FPHIHHLNNQDHMTTRSKTVQEPTQPTL 1068
            H Q H    +H T + S+ +T P ++       P I     Q  +T         T P +
Sbjct: 12   HSQLHDQLEEHVTHSGSTTTTFPQSKQLFQ---PIIIQPCQQPVLTFEPNPY---THPMV 65

Query: 1067 RKQDHSCGIFKPKISSTTNHSL 1002
             +     GI+KPK+ +   H L
Sbjct: 66   TRS--KAGIYKPKLFNVLKHPL 85


>gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 2446

 Score = 50.8 bits (120), Expect(2) = 4e-10
 Identities = 22/47 (46%), Positives = 33/47 (70%)
 Frame = -2

Query: 897 QSLIHTDTWSLVPYSPRQNLVGSI*VFKIKYNADGSIGRHKARFVAK 757
           ++L+   TW LVP  PR N+V    +FK K+++DGS+ RHKAR+V +
Sbjct: 627 KALVDNGTWRLVPRPPRANIVMGKWIFKHKFHSDGSLARHKARWVVR 673



 Score = 40.8 bits (94), Expect(2) = 4e-10
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -1

Query: 784 KTQSQVCGQGKKQGLDYSETYNSVAK---LFTIKSITLQFD*PIKKLDVNSNFLHKNLKE 614
           K +  V G  ++ G+DY ET++ V K   ++ + SI      PI +LDV + FLH +LKE
Sbjct: 667 KARWVVRGYSQQHGIDYDETFSPVVKSATIWVVLSIAASRAWPIHQLDVKNVFLHGHLKE 726