BLASTX nr result

ID: Coptis24_contig00015752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015752
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   112   2e-23
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   107   1e-21
ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, par...   102   4e-20
ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212...   102   4e-20
ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...   100   1e-19

>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/112 (50%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
 Frame = +1

Query: 4   DTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFI 183
           D IPRVLSCGHS CE CL +LPQR+Q+TIRCP+C QLV Y + Q GP SLPKNIDLL   
Sbjct: 17  DAIPRVLSCGHSVCEACLAELPQRYQDTIRCPACTQLVKYPSQQ-GPSSLPKNIDLLRLS 75

Query: 184 SQQNPTSLKS--------PKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVL 315
            Q +P+   S        P Q S+T       ++ P F S   +  WKDW+L
Sbjct: 76  LQHSPSPSSSSSSDHSQIPNQRSTT----NSCYYHPPFSSHELYVTWKDWIL 123


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/102 (50%), Positives = 66/102 (64%)
 Frame = +1

Query: 10  IPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQ 189
           IPRVL+CGH+ CE C+  LPQRF +TIRCP+C QLV + + Q GP +LPKNIDLL     
Sbjct: 21  IPRVLACGHTACEACITHLPQRFLDTIRCPACTQLVKFSHLQ-GPSALPKNIDLLRLCLS 79

Query: 190 QNPTSLKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVL 315
           ++    K  K+      ++ H  FLP  WS  F++ WKDWVL
Sbjct: 80  EDSDYQKPQKRP-----ITSHYEFLPRLWSDQFYSVWKDWVL 116


>ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
          Length = 741

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/102 (50%), Positives = 60/102 (58%)
 Frame = +1

Query: 10  IPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQ 189
           +PRVLSCGHS C TCL  LPQRF  TIRCP+CN LV +     G  +LPKNIDLL    +
Sbjct: 19  VPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGASALPKNIDLLRLCPE 76

Query: 190 QNPTSLKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVL 315
            N   L S K  S    ++Q   F P  WS  F+  WK WVL
Sbjct: 77  PNAGELVSKK--SVKRSINQTHEFFPRLWSDEFYRAWKHWVL 116


>ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
          Length = 761

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/102 (50%), Positives = 60/102 (58%)
 Frame = +1

Query: 10  IPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQ 189
           +PRVLSCGHS C TCL  LPQRF  TIRCP+CN LV +     G  +LPKNIDLL    +
Sbjct: 19  VPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGASALPKNIDLLRLCPE 76

Query: 190 QNPTSLKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVL 315
            N   L S K  S    ++Q   F P  WS  F+  WK WVL
Sbjct: 77  PNAGELVSKK--SVKRSINQTHEFFPRLWSDEFYRAWKHWVL 116


>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540534|gb|EEF42101.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1794

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/103 (53%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
 Frame = +1

Query: 10  IPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQ 189
           IPRVL+CGH+TCE+CL  LPQ++  TIRCP+C QLV +     GP SLPKNIDLL  I  
Sbjct: 19  IPRVLTCGHTTCESCLKSLPQKYPQTIRCPACVQLVKF--PSLGPSSLPKNIDLLRLI-- 74

Query: 190 QNPTSLKSPKQESSTTLVSQHAFFLPSF-WSQHFFTNWKDWVL 315
             PT+ K  KQ  + +  S H     SF WS  FF  WK+WVL
Sbjct: 75  --PTNHKK-KQPINHSRSSDHQVDSASFLWSDDFFVTWKNWVL 114


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