BLASTX nr result
ID: Coptis24_contig00015745
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015745 (648 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW60393.1| hypothetical protein ZEAMMB73_326542 [Zea mays] 105 2e-27 ref|XP_002451753.1| hypothetical protein SORBIDRAFT_04g007260 [S... 106 3e-27 ref|NP_001170122.1| uncharacterized protein LOC100384044 [Zea ma... 103 4e-27 gb|AFW66091.1| hypothetical protein ZEAMMB73_361265 [Zea mays] 103 1e-26 ref|NP_001043539.1| Os01g0609300 [Oryza sativa Japonica Group] g... 100 2e-26 >gb|AFW60393.1| hypothetical protein ZEAMMB73_326542 [Zea mays] Length = 1449 Score = 105 bits (263), Expect(2) = 2e-27 Identities = 46/79 (58%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Frame = +1 Query: 217 WYYWGCPISWTLYGLGASQYGDI-DTKMETGESVKDFLESYFGYKYESLGWISAGVVGYT 393 WY W CP++WTLYGL ASQ+GDI D K+E GE VKDF++ +FG+ ++ LG+ + VVG+T Sbjct: 1371 WYSWACPVAWTLYGLVASQFGDITDVKLEDGEIVKDFIDRFFGFTHDHLGYAATAVVGFT 1430 Query: 394 VLFALVFAISIKKLNFQTR 450 VLF+ +FA SIK NFQ R Sbjct: 1431 VLFSFMFAFSIKVFNFQIR 1449 Score = 42.4 bits (98), Expect(2) = 2e-27 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +2 Query: 2 GMMAVGLTPNGXXXXXXXXXXXXXXXXXXGFVIARPQIPVWWR 130 GMMAV +TPN GF+I RP+IP+WWR Sbjct: 1328 GMMAVAMTPNSDIAALASTAFYAIWNIFAGFIIPRPRIPIWWR 1370 >ref|XP_002451753.1| hypothetical protein SORBIDRAFT_04g007260 [Sorghum bicolor] gi|241931584|gb|EES04729.1| hypothetical protein SORBIDRAFT_04g007260 [Sorghum bicolor] Length = 1442 Score = 106 bits (264), Expect(2) = 3e-27 Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 1/79 (1%) Frame = +1 Query: 217 WYYWGCPISWTLYGLGASQYGDI-DTKMETGESVKDFLESYFGYKYESLGWISAGVVGYT 393 WY W CP++WTLYGL ASQ+GDI D ++E E VKDF+ +FG+++++LG+++ VVG+T Sbjct: 1364 WYSWACPVAWTLYGLVASQFGDITDVRLEDDEIVKDFVNRFFGFQHDNLGYVATAVVGFT 1423 Query: 394 VLFALVFAISIKKLNFQTR 450 VLFA VFA SIK NFQ R Sbjct: 1424 VLFAFVFAFSIKVFNFQRR 1442 Score = 41.6 bits (96), Expect(2) = 3e-27 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +2 Query: 2 GMMAVGLTPNGXXXXXXXXXXXXXXXXXXGFVIARPQIPVWWR 130 GMMAV +TPN GF+I RP+IP+WWR Sbjct: 1321 GMMAVAMTPNSDIAAIVSTAFYAIWNIFAGFLIPRPRIPIWWR 1363 >ref|NP_001170122.1| uncharacterized protein LOC100384044 [Zea mays] gi|224033649|gb|ACN35900.1| unknown [Zea mays] Length = 587 Score = 103 bits (257), Expect(2) = 4e-27 Identities = 44/78 (56%), Positives = 58/78 (74%) Frame = +1 Query: 217 WYYWGCPISWTLYGLGASQYGDIDTKMETGESVKDFLESYFGYKYESLGWISAGVVGYTV 396 WY W CP++WTLYGL SQ+GD+ T M+ G +VK F+E YFG+K+ LGW++A VV + V Sbjct: 510 WYCWICPVAWTLYGLVVSQFGDVMTPMDDGRAVKVFVEDYFGFKHSWLGWVAAVVVAFAV 569 Query: 397 LFALVFAISIKKLNFQTR 450 LFA +F +I KLNFQ R Sbjct: 570 LFATLFGFAIMKLNFQKR 587 Score = 43.9 bits (102), Expect(2) = 4e-27 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = +2 Query: 2 GMMAVGLTPNGXXXXXXXXXXXXXXXXXXGFVIARPQIPVWWR 130 GMMAVGLTPN GF+I RP++P+WWR Sbjct: 467 GMMAVGLTPNYHIAAIVSSAFYAIWNLFSGFIIPRPKVPIWWR 509 >gb|AFW66091.1| hypothetical protein ZEAMMB73_361265 [Zea mays] Length = 1443 Score = 103 bits (258), Expect(2) = 1e-26 Identities = 47/80 (58%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = +1 Query: 217 WYYWGCPISWTLYGLGASQYGDI-DTKMET-GESVKDFLESYFGYKYESLGWISAGVVGY 390 WY W CP++WTLYGL ASQ+GDI D ++E GE VKDF+ +FG+++++LG+++ VVG+ Sbjct: 1364 WYSWACPVAWTLYGLVASQFGDIADIRLEDDGELVKDFVNRFFGFEHDNLGYVATAVVGF 1423 Query: 391 TVLFALVFAISIKKLNFQTR 450 TVLFA VFA SIK NFQ R Sbjct: 1424 TVLFAFVFAFSIKVFNFQRR 1443 Score = 41.6 bits (96), Expect(2) = 1e-26 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +2 Query: 2 GMMAVGLTPNGXXXXXXXXXXXXXXXXXXGFVIARPQIPVWWR 130 GMMAV +TPN GF+I RP+IP+WWR Sbjct: 1321 GMMAVAMTPNSDIAAIVSTAFYAIWNIFAGFLIPRPRIPIWWR 1363 >ref|NP_001043539.1| Os01g0609300 [Oryza sativa Japonica Group] gi|122241165|sp|Q0JLC5.1|PDR3_ORYSJ RecName: Full=Pleiotropic drug resistance protein 3 gi|27368821|emb|CAD59568.1| PDR-like ABC transporter [Oryza sativa Japonica Group] gi|28144343|tpg|DAA00886.1| TPA_exp: PDR3 ABC transporter [Oryza sativa (japonica cultivar-group)] gi|113533070|dbj|BAF05453.1| Os01g0609300 [Oryza sativa Japonica Group] Length = 1457 Score = 100 bits (250), Expect(2) = 2e-26 Identities = 42/78 (53%), Positives = 55/78 (70%) Frame = +1 Query: 217 WYYWGCPISWTLYGLGASQYGDIDTKMETGESVKDFLESYFGYKYESLGWISAGVVGYTV 396 WY W CP++WTLYGL SQ+GDI+T ME G VK F+E+YFG+K+ LGW++ V + Sbjct: 1380 WYCWACPVAWTLYGLVVSQFGDIETPMEDGTPVKVFVENYFGFKHSWLGWVATVVAAFAF 1439 Query: 397 LFALVFAISIKKLNFQTR 450 LFA +F +I K NFQ R Sbjct: 1440 LFASLFGFAIMKFNFQKR 1457 Score = 44.3 bits (103), Expect(2) = 2e-26 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +2 Query: 2 GMMAVGLTPNGXXXXXXXXXXXXXXXXXXGFVIARPQIPVWWR 130 GMMAVGLTPN GFVI RP++P+WWR Sbjct: 1337 GMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWR 1379