BLASTX nr result

ID: Coptis24_contig00015742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015742
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
gb|ABK22240.1| unknown [Picea sitchensis]                              78   9e-13
ref|XP_002525423.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002319693.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11

>ref|XP_002297620.1| predicted protein [Populus trichocarpa] gi|222844878|gb|EEE82425.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   FNSILVVTVAKISAHVWQFIACN--PERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 168
           FNS++V++VA +SA VWQ IAC    +R+SS Q+LDL+CC PLQQLGRLA  +WTF C
Sbjct: 3   FNSLIVLSVAHVSADVWQQIACIRFQDRVSSHQLLDLVCCFPLQQLGRLALFVWTFLC 60


>gb|ABK22240.1| unknown [Picea sitchensis]
          Length = 87

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = +1

Query: 1   FNSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 168
           FN+ ++V+VA  SA   Q ++CNPERLSS+ VL L+CCLP +QLGRL  C+W+FFC
Sbjct: 3   FNTPIIVSVATWSASACQSLSCNPERLSSDHVLSLLCCLPYRQLGRLVVCVWSFFC 58


>ref|XP_002525423.1| conserved hypothetical protein [Ricinus communis]
           gi|223535236|gb|EEF36913.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = +1

Query: 4   NSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 168
           NS +VV VA ISA+V Q+IACNPERLSS+QVL+L+ CLPL+  GRLA  LW + C
Sbjct: 4   NSNVVVRVANISANVCQYIACNPERLSSDQVLNLLFCLPLRHFGRLALSLWNYLC 58


>ref|XP_002319693.1| predicted protein [Populus trichocarpa] gi|222858069|gb|EEE95616.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = +1

Query: 4   NSILVVTVAKISAHVWQFIACNPERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 168
           NS L+VT+A +SA++ Q+IACNPERLSS+QVL L+ CLPL   GRLA   WT+ C
Sbjct: 4   NSSLMVTIANVSANLCQYIACNPERLSSDQVLHLLFCLPLHHFGRLALSFWTYLC 58


>ref|XP_002303987.1| predicted protein [Populus trichocarpa] gi|222841419|gb|EEE78966.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
 Frame = +1

Query: 1   FNSILVVTVAKISAHVWQFIACN--PERLSSEQVLDLICCLPLQQLGRLAFCLWTFFC 168
           FNS++V++VA  SA VWQ IAC    +++SS Q+LDL+CC PLQQLGR +  +WTF C
Sbjct: 3   FNSLIVLSVAHKSADVWQQIACMGLQDQVSSHQLLDLVCCFPLQQLGRFSLYIWTFLC 60


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