BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015731
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Ar...   126   7e-48
ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabi...   126   7e-48
gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali...   126   7e-48
ref|XP_002894123.1| helicase domain-containing protein [Arabidop...   126   1e-47
ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helica...   123   2e-45

>ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1206

 Score =  126 bits (316), Expect(2) = 7e-48
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = -2

Query: 389 FRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEAEIKTERGAACSIICT 210
           FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE+EI+  RGA CSIICT
Sbjct: 295 FRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICT 354

Query: 209 QPRRISAMAVSERVAVERGK 150
           QPRRISA++VSERVA ERG+
Sbjct: 355 QPRRISAISVSERVAAERGE 374



 Score = 89.7 bits (221), Expect(2) = 7e-48
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -1

Query: 144 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 1
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1197

 Score =  126 bits (316), Expect(2) = 7e-48
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = -2

Query: 389 FRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEAEIKTERGAACSIICT 210
           FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE+EI+  RGA CSIICT
Sbjct: 295 FRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICT 354

Query: 209 QPRRISAMAVSERVAVERGK 150
           QPRRISA++VSERVA ERG+
Sbjct: 355 QPRRISAISVSERVAAERGE 374



 Score = 89.7 bits (221), Expect(2) = 7e-48
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -1

Query: 144 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 1
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
          Length = 1167

 Score =  126 bits (316), Expect(2) = 7e-48
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = -2

Query: 389 FRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEAEIKTERGAACSIICT 210
           FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE+EI+  RGA CSIICT
Sbjct: 265 FRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICT 324

Query: 209 QPRRISAMAVSERVAVERGK 150
           QPRRISA++VSERVA ERG+
Sbjct: 325 QPRRISAISVSERVAAERGE 344



 Score = 89.7 bits (221), Expect(2) = 7e-48
 Identities = 40/48 (83%), Positives = 47/48 (97%)
 Frame = -1

Query: 144 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 1
           VGYKV LEG++GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 350 VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 397


>ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297339965|gb|EFH70382.1| helicase
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1197

 Score =  126 bits (317), Expect(2) = 1e-47
 Identities = 59/80 (73%), Positives = 73/80 (91%)
 Frame = -2

Query: 389 FRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEAEIKTERGAACSIICT 210
           FR++LP+Y E+DALL  I+ NQVVV++GETGCGKTTQ+PQYILE+EI+  RGA+CSIICT
Sbjct: 295 FRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGASCSIICT 354

Query: 209 QPRRISAMAVSERVAVERGK 150
           QPRRISA++VSERVA ERG+
Sbjct: 355 QPRRISAISVSERVAAERGE 374



 Score = 88.6 bits (218), Expect(2) = 1e-47
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = -1

Query: 144 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 1
           VGYKV LEG+ GRDTRLLFCTTG+LLRRLLVDR+LKGV+H++VDEIHE
Sbjct: 380 VGYKVRLEGMTGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHE 427


>ref|XP_003559590.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like
           [Brachypodium distachyon]
          Length = 1121

 Score =  123 bits (308), Expect(2) = 2e-45
 Identities = 56/81 (69%), Positives = 74/81 (91%)
 Frame = -2

Query: 389 FRRSLPSYNERDALLTMISQNQVVVITGETGCGKTTQVPQYILEAEIKTERGAACSIICT 210
           FR+SLP+Y E++ LL  I++NQV+VI+GETGCGKTTQ+PQ++LE+EI++ RGA C+IICT
Sbjct: 242 FRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCNIICT 301

Query: 209 QPRRISAMAVSERVAVERGKS 147
           QPRRISAMAVSERV+ ERG++
Sbjct: 302 QPRRISAMAVSERVSTERGEN 322



 Score = 84.3 bits (207), Expect(2) = 2e-45
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -1

Query: 144 VGYKVHLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVSHIIVDEIHE 1
           VGYKV LEG+KG+DT LLFCT+GILLRRLL DRNL GVSH+ VDEIHE
Sbjct: 327 VGYKVRLEGMKGKDTHLLFCTSGILLRRLLSDRNLNGVSHVFVDEIHE 374