BLASTX nr result

ID: Coptis24_contig00015730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015730
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   214   5e-54
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   214   8e-54
ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helica...   214   8e-54
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   214   8e-54
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              214   8e-54

>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  214 bits (546), Expect = 5e-54
 Identities = 106/119 (89%), Positives = 112/119 (94%)
 Frame = -2

Query: 357 SVEGQKMVEFRRGLPAYNEKDALLKAVSQNQVVVVSGETGCGKTTQLPQYILESEIEAGR 178
           S EGQKM+EFRR LPAY EKD LLKA+S+NQV+VVSGETGCGKTTQLPQYILESEIEA R
Sbjct: 149 SPEGQKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTTQLPQYILESEIEAAR 208

Query: 177 GALCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGTKGRDTRLLFCTTGIL 1
           GA CSIICTQPRRISAM+VSERVAAERGEKLGESVGYKVRLEG +GRDTRLLFCTTGIL
Sbjct: 209 GAACSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGIL 267


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1231

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/119 (88%), Positives = 114/119 (95%)
 Frame = -2

Query: 357 SVEGQKMVEFRRGLPAYNEKDALLKAVSQNQVVVVSGETGCGKTTQLPQYILESEIEAGR 178
           S+EGQKM+EFR+ LPA+ E++ALLKA+S+NQVVVVSGETGCGKTTQLPQYILESEIEA R
Sbjct: 298 SLEGQKMIEFRKSLPAFKEREALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAAR 357

Query: 177 GALCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGTKGRDTRLLFCTTGIL 1
           GA CSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEG KGRDTRLLFCTTG+L
Sbjct: 358 GASCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVL 416


>ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1168

 Score =  214 bits (544), Expect = 8e-54
 Identities = 105/119 (88%), Positives = 114/119 (95%)
 Frame = -2

Query: 357 SVEGQKMVEFRRGLPAYNEKDALLKAVSQNQVVVVSGETGCGKTTQLPQYILESEIEAGR 178
           S+EGQKM+EFR+ LPA+ E++ALLKA+S+NQVVVVSGETGCGKTTQLPQYILESEIEA R
Sbjct: 251 SLEGQKMIEFRKSLPAFKEREALLKAISENQVVVVSGETGCGKTTQLPQYILESEIEAAR 310

Query: 177 GALCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGTKGRDTRLLFCTTGIL 1
           GA CSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEG KGRDTRLLFCTTG+L
Sbjct: 311 GASCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVL 369


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  214 bits (544), Expect = 8e-54
 Identities = 108/119 (90%), Positives = 111/119 (93%)
 Frame = -2

Query: 357 SVEGQKMVEFRRGLPAYNEKDALLKAVSQNQVVVVSGETGCGKTTQLPQYILESEIEAGR 178
           S EGQKM EFRR LPAY E++ALL A+SQNQVVVVSGETGCGKTTQLPQYILESEIEA R
Sbjct: 269 SSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAAR 328

Query: 177 GALCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGTKGRDTRLLFCTTGIL 1
           GA CSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEG KGRDTRLLFCTTGIL
Sbjct: 329 GAFCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGIL 387


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  214 bits (544), Expect = 8e-54
 Identities = 108/119 (90%), Positives = 111/119 (93%)
 Frame = -2

Query: 357 SVEGQKMVEFRRGLPAYNEKDALLKAVSQNQVVVVSGETGCGKTTQLPQYILESEIEAGR 178
           S EGQKM EFRR LPAY E++ALL A+SQNQVVVVSGETGCGKTTQLPQYILESEIEA R
Sbjct: 148 SSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAAR 207

Query: 177 GALCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGTKGRDTRLLFCTTGIL 1
           GA CSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEG KGRDTRLLFCTTGIL
Sbjct: 208 GAFCSIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGIL 266


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