BLASTX nr result

ID: Coptis24_contig00015677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015677
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinest...   503   e-140
ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana] gi|753...   455   e-125
ref|XP_002527752.1| Pectinesterase-2 precursor, putative [Ricinu...   451   e-124
ref|XP_002878254.1| pectinesterase family protein [Arabidopsis l...   444   e-122
emb|CBI39447.3| unnamed protein product [Vitis vinifera]              424   e-116

>ref|XP_003632058.1| PREDICTED: probable pectinesterase/pectinesterase inhibitor 35-like
            [Vitis vinifera]
          Length = 553

 Score =  503 bits (1294), Expect = e-140
 Identities = 273/519 (52%), Positives = 344/519 (66%), Gaps = 8/519 (1%)
 Frame = +3

Query: 195  SSVHISTVSKXXXXXXXPFPCKDTLYPKACESQILSAKDASSTPITLDDVLNLSIKSVID 374
            SS H STV K          CK T Y  AC+S +LS+ + +  P T  D+ +LS++  ++
Sbjct: 39   SSSHTSTVPKASMEAIVSAACKATFYQTACQSALLSSTNGA-VPQTQADLFDLSVQFSLN 97

Query: 375  RATLAKSLAQNVSLMNQRENPNSFTALDDCVELLDHSIDQLNSILXXXXXXXXXXXXXX- 551
            +A  A++   ++ L++ +      T  DDC+ELLD ++DQL ++                
Sbjct: 98   QARSARAHVHDLRLLDHKTQIVRGT--DDCMELLDDTLDQLTNVANRRKTLIEDPDDVQT 155

Query: 552  WLSTAITHQTTCLDGLQTHKFFKEKELIHATLQSNIQHVSNSLVIHKSIVSAKTL-KVST 728
            WLS A+T+Q TCL+ +QT++   +  L+    Q+    +SNSL +H S   +K   + +T
Sbjct: 156  WLSAALTNQATCLESIQTYQTGGQNGLMRPMAQNLTYSISNSLALHMSTRPSKEAQRTNT 215

Query: 729  AG--RRLLSDDFPTWVSTGERKLLESSIKDIEVNAVVAMDGTGTHRTISEALAFASLVGG 902
            AG  RRLLSD FP WV+  ERKLLE+S+++I   AVVA DG+GTH+TI EALA    + G
Sbjct: 216  AGHHRRLLSDRFPGWVTAAERKLLEASVEEIGATAVVAKDGSGTHKTIGEALAMVVTLEG 275

Query: 903  GGRTVIHVTAGTYNENNIMVSAKQSNVMLVGDGKXXXXXXXXXXXXXXXXXXXXXXFGAG 1082
             GRTVIHV AGTY+E  + + + Q NVMLVGDGK                       G  
Sbjct: 276  EGRTVIHVKAGTYDEG-LKIPSSQKNVMLVGDGKGKTVIVGHKSYAGGSSTYDSATVGVM 334

Query: 1083 GDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSNRQFYRETDI 1262
            GDGFIARDI+  N AGP KGQAVAL V +D+SV +RCSIIGYQDTLYTLS RQFYRETDI
Sbjct: 335  GDGFIARDITIENDAGPGKGQAVALRVGSDRSVVFRCSIIGYQDTLYTLSKRQFYRETDI 394

Query: 1263 YGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHKCRIAGTGGN 1442
            YGTVDFIFGNSAVVFQSCN+   +R S    F+TAQGR DPNQNTGISIH C+I   G  
Sbjct: 395  YGTVDFIFGNSAVVFQSCNL--NARKSSNNNFVTAQGREDPNQNTGISIHNCKITTEGST 452

Query: 1443 TYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMNSGPGASTSGRVK 1610
            TYLGRPWKKYSRTV MQS+LDG I P+GW+PW+G   +ST++YGEYMN+GPGASTSGRVK
Sbjct: 453  TYLGRPWKKYSRTVIMQSYLDGSIPPSGWYPWSGSFALSTLFYGEYMNAGPGASTSGRVK 512

Query: 1611 WSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 1727
            W G    +T + A EFTVG  ISGN+WLPSTG+ F+SGL
Sbjct: 513  WGGYQGELTASVAQEFTVGEFISGNAWLPSTGVSFDSGL 551


>ref|NP_191460.1| pectinesterase 35 [Arabidopsis thaliana]
            gi|75311708|sp|Q9LYT5.1|PME35_ARATH RecName:
            Full=Probable pectinesterase/pectinesterase inhibitor 35;
            Includes: RecName: Full=Pectinesterase inhibitor 35;
            AltName: Full=Pectin methylesterase inhibitor 35;
            Includes: RecName: Full=Pectinesterase 35; Short=PE 35;
            AltName: Full=Pectin methylesterase 35; Short=AtPME35;
            Flags: Precursor gi|7529744|emb|CAB86929.1|
            pectinesterase precursor-like protein [Arabidopsis
            thaliana] gi|16974625|gb|AAL31215.1| AT3g59010/F17J16_60
            [Arabidopsis thaliana] gi|24111417|gb|AAN46858.1|
            At3g59010/F17J16_60 [Arabidopsis thaliana]
            gi|332646339|gb|AEE79860.1| pectinesterase 35
            [Arabidopsis thaliana]
          Length = 529

 Score =  455 bits (1171), Expect = e-125
 Identities = 245/465 (52%), Positives = 318/465 (68%), Gaps = 7/465 (1%)
 Frame = +3

Query: 354  SIKSVIDRATLAKSLAQNVSLMNQRENPNSFTALDDCVELLDHSIDQLNSILXXXXXXXX 533
            S++  +D A  A+SLA N++L ++         ++DC+ELLD ++D L  I+        
Sbjct: 69   SVQLSLDHALFARSLAFNLTLSHRTSQTLMLDPVNDCLELLDDTLDMLYRIVVIKRKDHV 128

Query: 534  XXXXXXWLSTAITHQTTCLDGLQTHKFFKEKELIHATLQSNIQHV-SNSLVIHKSIVSAK 710
                  WLS A+T+Q TC   L     F ++ +   +   N+  + +NSL +  S     
Sbjct: 129  NDDVHTWLSAALTNQETCKQSLSEKSSFNKEGIAIDSFARNLTGLLTNSLDMFVSDKQKS 188

Query: 711  TLKVS-TAGRRLLSD-DFPTWVSTGERKLLESSIKDIEVNAVVAMDGTGTHRTISEALAF 884
            +   + T GR+LLSD DFPTWVS+ +RKLLE+S++++  +AVVA DG+GTH +++EALA 
Sbjct: 189  SSSSNLTGGRKLLSDHDFPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALA- 247

Query: 885  ASLVGGGGRTVIHVTAGTYNENNIMVSAKQSNVMLVGDGKXXXXXXXXXXXXXXXXXXXX 1064
             SL  G GR+VIH+TAGTY EN + + +KQ NVMLVGDGK                    
Sbjct: 248  -SLEKGSGRSVIHLTAGTYKEN-LNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQS 305

Query: 1065 XXFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSNRQF 1244
                A GDGFIARDI+FVN+AGP+  QAVAL V +D+SV YRCSI GYQD+LYTLS RQF
Sbjct: 306  ATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQF 365

Query: 1245 YRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHKCRI 1424
            YRETDI GTVDFIFGNSAVVFQSCN++ R +GS  + ++TAQGR+DPNQNTGISIH CRI
Sbjct: 366  YRETDITGTVDFIFGNSAVVFQSCNLVSR-KGSSDQNYVTAQGRSDPNQNTGISIHNCRI 424

Query: 1425 AGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWN---GMSTIYYGEYMNSGPGAS 1592
             G+   TYLGRPWK+YSRTV MQSF+DG I+P+GW PW+    + T+YYGE+ NSGPG+S
Sbjct: 425  TGS-TKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSS 483

Query: 1593 TSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 1727
             SGRV W+G HP++T  EA  FTV   I GNSWLPSTG++F+SGL
Sbjct: 484  VSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528


>ref|XP_002527752.1| Pectinesterase-2 precursor, putative [Ricinus communis]
            gi|223532839|gb|EEF34613.1| Pectinesterase-2 precursor,
            putative [Ricinus communis]
          Length = 583

 Score =  451 bits (1159), Expect = e-124
 Identities = 262/517 (50%), Positives = 330/517 (63%), Gaps = 26/517 (5%)
 Frame = +3

Query: 255  CKDTLYPKACESQILSAKDASSTPITLDDVLNLSIKSVIDRATLAKSLAQNVSLMNQ-RE 431
            C D  Y  ACES + S K  ++ P T  ++ + S+   + +A  A  LA  VS  N  + 
Sbjct: 71   CNDIPYKSACESVLSSLK--TTIPTTPKELFDHSVHYTLKQARSAFELASTVSPSNNVKA 128

Query: 432  NPNSFTA--------LDDCVELLDHSIDQLNSILXXXXXXXXXXXXXX-WLSTAITHQTT 584
              N+  A        + DCVELL+ S+D L++I                WLS A+T+Q T
Sbjct: 129  AANTHLAAVAGGGGGMIDCVELLEDSLDLLSTITNRKNNPKHTHNDVQTWLSAALTNQET 188

Query: 585  CLDGLQTHKFF----KEKELIHATLQSNIQHVSNSLVIHKSIVSAKTLKVSTAGRRLLS- 749
            C++ LQ  K      + +E+I  T ++  QH+SNSL ++ S     T + +  GR+LLS 
Sbjct: 189  CIESLQNDKLLFKLDRGQEMIR-TARNLSQHISNSLALYMSHYY-NTKESNKGGRKLLSG 246

Query: 750  DDFPTWVSTGERKLLESSIKDIEVNAVVAMDGTGTHRTISEALAFA---SLVG--GGGRT 914
            DDFP WVS  ERKLLE+ + +I+ +AVVA DG+GTH TI EA+A     SL G  GGGR 
Sbjct: 247  DDFPAWVSESERKLLETPVAEIKAHAVVAKDGSGTHTTIGEAIAEVMSYSLAGEGGGGRN 306

Query: 915  VIHVTAGTYNENNIMVSAKQSNVMLVGDGKXXXXXXXXXXXXXXXXXXXXXXFGAGGDGF 1094
            VI+V AGTY+EN + +  KQ NVMLVGDGK                          GDGF
Sbjct: 307  VIYVKAGTYHEN-LKLPTKQKNVMLVGDGKGKSVITGSRSADDGYSTFQTATVSVMGDGF 365

Query: 1095 IARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSNRQFYRETDIYGTV 1274
            +A+ I+FVN+AGP+K QAVAL V +DKSV Y+CS+   QDTLYT S RQFYR+TDIYGT+
Sbjct: 366  MAKGITFVNSAGPNKHQAVALRVASDKSVIYQCSLEANQDTLYTHSKRQFYRDTDIYGTI 425

Query: 1275 DFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHKCRIAGTGGN--TY 1448
            DFIFGNSAVV Q+CNI  R    D K ++TAQGRTDPNQNTGISIH C+I    G+  TY
Sbjct: 426  DFIFGNSAVVIQNCNIFARKPSGD-KNYVTAQGRTDPNQNTGISIHNCKITSESGSKVTY 484

Query: 1449 LGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMNSGPGASTSGRVKWS 1616
            LGRPW+KY+R V MQSFLDG INPAGWFPW+G   ++T+YY EYMNSGPGASTSGRVKW 
Sbjct: 485  LGRPWQKYARVVIMQSFLDGSINPAGWFPWSGSFALNTLYYAEYMNSGPGASTSGRVKWP 544

Query: 1617 GNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 1727
            G    ++ A A  FTVG+ I GN WLPSTG+ F+SGL
Sbjct: 545  GYKGILSSAAAQTFTVGNFIEGNMWLPSTGVSFDSGL 581


>ref|XP_002878254.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297324092|gb|EFH54513.1| pectinesterase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  444 bits (1141), Expect = e-122
 Identities = 243/468 (51%), Positives = 315/468 (67%), Gaps = 10/468 (2%)
 Frame = +3

Query: 354  SIKSVIDRATLAKSLAQNVSLMNQRENPNSFTALDDCVELLDHSIDQLNSILXXXXXXXX 533
            S++  ++ A  A+S A N++L ++         ++DC+ELLD ++D L+ I+        
Sbjct: 65   SVQLSLEDALFARSFAFNLTLSHRTSQSLMLDPVNDCLELLDDTLDMLSRIVVIKRKDHV 124

Query: 534  XXXXXXWLSTAITHQTTCLDGLQTHKFFKEKELIHATLQSNIQHV-SNSLVIHKSIVSAK 710
                  WLS A+T+Q TC   L     F +  +   +   N+  + +NSL +    VS K
Sbjct: 125  NDDVHTWLSAALTNQETCKQSLSEKSSFNKDGIAIDSFARNLTGLLTNSLDM---FVSDK 181

Query: 711  TLKVS----TAGRRLLSD-DFPTWVSTGERKLLESSIKDIEVNAVVAMDGTGTHRTISEA 875
                S    T GR+LLS+ DFP+W S  +RKLLE+S++++  +AVVA DG+GTH +I+EA
Sbjct: 182  RKSSSSSRLTGGRKLLSEHDFPSWFSMSDRKLLEASVEELRPHAVVAADGSGTHMSIAEA 241

Query: 876  LAFASLVGGGGRTVIHVTAGTYNENNIMVSAKQSNVMLVGDGKXXXXXXXXXXXXXXXXX 1055
            LA  SL  G GR+VIH+ AGTY EN + + +KQ NVMLVGDGK                 
Sbjct: 242  LA--SLEKGSGRSVIHLAAGTYKEN-LNIPSKQKNVMLVGDGKGKTVIIGSRSNRGGWNT 298

Query: 1056 XXXXXFGAGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSN 1235
                   A GDGFIARDI+FVN+AGP+  QAVAL V +D+SV YRCSI GYQD+LYTLS 
Sbjct: 299  YQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSK 358

Query: 1236 RQFYRETDIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHK 1415
            RQFYRETDI GTVDFIFGNSAVVFQSCN++ R +GS  + ++TAQGR+DPNQNTGISIH 
Sbjct: 359  RQFYRETDITGTVDFIFGNSAVVFQSCNLVSR-KGSSDENYVTAQGRSDPNQNTGISIHN 417

Query: 1416 CRIAGTGGNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWN---GMSTIYYGEYMNSGP 1583
            CRI G+   TYLGRPWK+YSRTV MQSF+DG I+P+GW PW+    + T+YYGE+ NSGP
Sbjct: 418  CRITGS-TKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSSFALKTLYYGEFGNSGP 476

Query: 1584 GASTSGRVKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 1727
            G+S SGRV W+G HP++T  EA  FTV   I GNSWLPSTG++F+SGL
Sbjct: 477  GSSVSGRVGWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 524


>emb|CBI39447.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  424 bits (1090), Expect = e-116
 Identities = 218/341 (63%), Positives = 252/341 (73%), Gaps = 6/341 (1%)
 Frame = +3

Query: 723  STAG--RRLLSDDFPTWVSTGERKLLESSIKDIEVNAVVAMDGTGTHRTISEALAFASLV 896
            +TAG  RRLLSD FP WV+  ERKLLE+S+++I   AVVA DG+GTH+TI EALA    +
Sbjct: 93   NTAGHHRRLLSDRFPGWVTAAERKLLEASVEEIGATAVVAKDGSGTHKTIGEALAMVVTL 152

Query: 897  GGGGRTVIHVTAGTYNENNIMVSAKQSNVMLVGDGKXXXXXXXXXXXXXXXXXXXXXXFG 1076
             G GRTVIHV AGTY+E  + + + Q NVMLVGDGK                       G
Sbjct: 153  EGEGRTVIHVKAGTYDEG-LKIPSSQKNVMLVGDGKGKTVIVGHKSYAGGSSTYDSATVG 211

Query: 1077 AGGDGFIARDISFVNTAGPSKGQAVALVVTADKSVFYRCSIIGYQDTLYTLSNRQFYRET 1256
              GDGFIARDI+  N AGP KGQAVAL V +D+SV +RCSIIGYQDTLYTLS RQFYRET
Sbjct: 212  VMGDGFIARDITIENDAGPGKGQAVALRVGSDRSVVFRCSIIGYQDTLYTLSKRQFYRET 271

Query: 1257 DIYGTVDFIFGNSAVVFQSCNILPRSRGSDGKVFITAQGRTDPNQNTGISIHKCRIAGTG 1436
            DIYGTVDFIFGNSAVVFQSCN+   +R S    F+TAQGR DPNQNTGISIH C+I   G
Sbjct: 272  DIYGTVDFIFGNSAVVFQSCNL--NARKSSNNNFVTAQGREDPNQNTGISIHNCKITTEG 329

Query: 1437 GNTYLGRPWKKYSRTVYMQSFLDG-INPAGWFPWNG---MSTIYYGEYMNSGPGASTSGR 1604
              TYLGRPWKKYSRTV MQS+LDG I P+GW+PW+G   +ST++YGEYMN+GPGASTSGR
Sbjct: 330  STTYLGRPWKKYSRTVIMQSYLDGSIPPSGWYPWSGSFALSTLFYGEYMNAGPGASTSGR 389

Query: 1605 VKWSGNHPSMTPAEASEFTVGSLISGNSWLPSTGIIFESGL 1727
            VKW G    +T + A EFTVG  ISGN+WLPSTG+ F+SGL
Sbjct: 390  VKWGGYQGELTASVAQEFTVGEFISGNAWLPSTGVSFDSGL 430


Top