BLASTX nr result

ID: Coptis24_contig00015676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015676
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like i...   446   e-122
ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like i...   441   e-121
ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_002516814.1| structural constituent of ribosome, putative...   435   e-119
ref|XP_004144960.1| PREDICTED: calcium-binding protein 39-like [...   430   e-118

>ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like isoform 1 [Vitis vinifera]
            gi|297736958|emb|CBI26159.3| unnamed protein product
            [Vitis vinifera]
          Length = 345

 Score =  446 bits (1146), Expect = e-122
 Identities = 228/318 (71%), Positives = 253/318 (79%)
 Frame = -3

Query: 1328 MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 1149
            MSFSFFKASR K P ELVKAI+DSL+ALD+KT               KNF++M+ +LSGD
Sbjct: 1    MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEVKALEKALEEVEKNFVTMKFMLSGD 60

Query: 1148 GEVEPNFENVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 969
            GE EPN E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 61   GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 120

Query: 968  EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 789
            EYI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F +LAKYIL+STSFELFFK+VELPN
Sbjct: 121  EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRFQTLAKYILESTSFELFFKFVELPN 180

Query: 788  FDVASDAFATFKDLLTRHETAASEFLTSRXXXXXXXXXXXLTSANYVTRRQXXXXXXXXX 609
            FDVASDAF TFKDLLT+H  A + FLT+            LTS NYVTRRQ         
Sbjct: 181  FDVASDAFLTFKDLLTKHGNAVAVFLTAHYDEFFDQYEKLLTSPNYVTRRQSLKLLSEFL 240

Query: 608  XXSPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 429
               PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFK+FVANPNKP+EI VILAK
Sbjct: 241  LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKIFVANPNKPREIKVILAK 300

Query: 428  NHERLLALLHNLSVGKGA 375
            NHERLLALL +LS GKGA
Sbjct: 301  NHERLLALLQSLSGGKGA 318


>ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like isoform 2 [Vitis vinifera]
          Length = 339

 Score =  441 bits (1135), Expect = e-121
 Identities = 227/318 (71%), Positives = 252/318 (79%)
 Frame = -3

Query: 1328 MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 1149
            MSFSFFKASR K P ELVKAI+DSL+ALD+KT                NF++M+ +LSGD
Sbjct: 1    MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEALEEVEK------NFVTMKFMLSGD 54

Query: 1148 GEVEPNFENVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 969
            GE EPN E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 55   GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 114

Query: 968  EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 789
            EYI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F +LAKYIL+STSFELFFK+VELPN
Sbjct: 115  EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRFQTLAKYILESTSFELFFKFVELPN 174

Query: 788  FDVASDAFATFKDLLTRHETAASEFLTSRXXXXXXXXXXXLTSANYVTRRQXXXXXXXXX 609
            FDVASDAF TFKDLLT+H  A + FLT+            LTS NYVTRRQ         
Sbjct: 175  FDVASDAFLTFKDLLTKHGNAVAVFLTAHYDEFFDQYEKLLTSPNYVTRRQSLKLLSEFL 234

Query: 608  XXSPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 429
               PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFK+FVANPNKP+EI VILAK
Sbjct: 235  LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKIFVANPNKPREIKVILAK 294

Query: 428  NHERLLALLHNLSVGKGA 375
            NHERLLALL +LS GKGA
Sbjct: 295  NHERLLALLQSLSGGKGA 312


>ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|222864577|gb|EEF01708.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  436 bits (1122), Expect = e-120
 Identities = 223/318 (70%), Positives = 249/318 (78%)
 Frame = -3

Query: 1328 MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 1149
            MSFSFFKASR K P E+VKA++DSLVALDTKT               KNF+SMR +L GD
Sbjct: 1    MSFSFFKASRPKTPQEVVKAMKDSLVALDTKTVVEVKALEKALEEVEKNFVSMRCMLCGD 60

Query: 1148 GEVEPNFENVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 969
            GEVE N + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWSILLKQ V S YC V
Sbjct: 61   GEVESNTDQVSQLALEVCKEDVLALMIHKLPNLGWEARKDLVHCWSILLKQKVDSRYCSV 120

Query: 968  EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 789
            EYI+NH E LDFLVVCYDNK++ALNCG MLRECIKFP+LAKYIL+S SFELFFK+VELPN
Sbjct: 121  EYIENHFEFLDFLVVCYDNKEIALNCGLMLRECIKFPTLAKYILESASFELFFKFVELPN 180

Query: 788  FDVASDAFATFKDLLTRHETAASEFLTSRXXXXXXXXXXXLTSANYVTRRQXXXXXXXXX 609
            FDVASDAF+TFKDLLT+H T  +E+LT+            LTS+NYVTRRQ         
Sbjct: 181  FDVASDAFSTFKDLLTKHGTVVAEYLTAHYDEFFDQYEKLLTSSNYVTRRQSLKLLSEFL 240

Query: 608  XXSPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 429
               P+SHIMKRYI EV +LKVMMTLLKDSSKNIQISAFHIFKVFVANPNKP+E+ VILAK
Sbjct: 241  LEPPSSHIMKRYIQEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPREVKVILAK 300

Query: 428  NHERLLALLHNLSVGKGA 375
            NH +LL LLHNLS GKGA
Sbjct: 301  NHGKLLELLHNLSAGKGA 318


>ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis]
            gi|223543902|gb|EEF45428.1| structural constituent of
            ribosome, putative [Ricinus communis]
          Length = 631

 Score =  435 bits (1118), Expect = e-119
 Identities = 222/318 (69%), Positives = 251/318 (78%)
 Frame = -3

Query: 1328 MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 1149
            MSFSFFK SR K PLE+VKA++DSL+ALDTKT               KN ++MR LL GD
Sbjct: 1    MSFSFFKPSRPKTPLEVVKAMKDSLMALDTKTVVEVKALEKALEEVEKNVVAMRCLLCGD 60

Query: 1148 GEVEPNFENVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 969
            GEVEPN + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWS+LLKQ V S YC V
Sbjct: 61   GEVEPNTDQVSQLVLEVCKEDVLALMIHKLPNLGWEARKDLVHCWSVLLKQKVDSKYCSV 120

Query: 968  EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 789
            EYI+NH ELLDFLVVCYDNK++ALNCG MLRECIKF SLAKYIL+S SFELFFK+VELPN
Sbjct: 121  EYIENHFELLDFLVVCYDNKEIALNCGLMLRECIKFSSLAKYILESASFELFFKFVELPN 180

Query: 788  FDVASDAFATFKDLLTRHETAASEFLTSRXXXXXXXXXXXLTSANYVTRRQXXXXXXXXX 609
            FDVASDAF+TFKDLL +H+T  +E+LT+            LTS NYVTRRQ         
Sbjct: 181  FDVASDAFSTFKDLLIKHDTVVAEYLTAHYDEFFDLYEKLLTSPNYVTRRQSLKLLSDFL 240

Query: 608  XXSPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 429
               PNSHIMKRYILEV +LKVMMTLLKDSSKNIQISAFHIFKVFVANPNKP+E+ VILAK
Sbjct: 241  LEPPNSHIMKRYILEVRYLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPREVKVILAK 300

Query: 428  NHERLLALLHNLSVGKGA 375
            N+ERL+ LL++LSVGKGA
Sbjct: 301  NNERLVELLNDLSVGKGA 318


>ref|XP_004144960.1| PREDICTED: calcium-binding protein 39-like [Cucumis sativus]
            gi|449471842|ref|XP_004153424.1| PREDICTED:
            calcium-binding protein 39-like [Cucumis sativus]
            gi|449523591|ref|XP_004168807.1| PREDICTED:
            calcium-binding protein 39-like [Cucumis sativus]
          Length = 342

 Score =  430 bits (1105), Expect = e-118
 Identities = 220/318 (69%), Positives = 249/318 (78%)
 Frame = -3

Query: 1328 MSFSFFKASRGKAPLELVKAIRDSLVALDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 1149
            MSFSFFK SR K P E+ K I+DSL+ALDTKT               KNF++MR +L GD
Sbjct: 1    MSFSFFKPSRPKTPQEVAKFIKDSLMALDTKTVVEVRALEKAMEEVEKNFVTMRCMLIGD 60

Query: 1148 GEVEPNFENVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 969
             EVEPN + V Q T EICKE VI L IHKLP+LGWEARKDLV+CWSILLKQ V S+YCCV
Sbjct: 61   AEVEPNADQVLQLTQEICKECVIDLLIHKLPVLGWEARKDLVNCWSILLKQKVASTYCCV 120

Query: 968  EYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFPSLAKYILDSTSFELFFKYVELPN 789
            +YI+NH ELLDFLVVCYDNK++A+NCGNMLRECIKFP+LAKYIL+S SFELFFK+VELPN
Sbjct: 121  QYIENHLELLDFLVVCYDNKEIAVNCGNMLRECIKFPTLAKYILESASFELFFKFVELPN 180

Query: 788  FDVASDAFATFKDLLTRHETAASEFLTSRXXXXXXXXXXXLTSANYVTRRQXXXXXXXXX 609
            FDVASDAF+TFKDLLT+H    S+FL+S            LTS+NYVTRRQ         
Sbjct: 181  FDVASDAFSTFKDLLTKHPDIVSDFLSSHYDEFFDRYEALLTSSNYVTRRQSLKLLSEFL 240

Query: 608  XXSPNSHIMKRYILEVHHLKVMMTLLKDSSKNIQISAFHIFKVFVANPNKPQEIIVILAK 429
              SPNS IMKRYILE+ +LKVMMTLLKDSSKNIQ+SAFHIFKVFVANPNKP+EI +IL K
Sbjct: 241  LESPNSQIMKRYILEIRNLKVMMTLLKDSSKNIQLSAFHIFKVFVANPNKPREIKLILTK 300

Query: 428  NHERLLALLHNLSVGKGA 375
            NHE+LL LLHNLS GKGA
Sbjct: 301  NHEKLLELLHNLSPGKGA 318