BLASTX nr result

ID: Coptis24_contig00015672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015672
         (1611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]    134   9e-32
ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|2...   134   9e-32
ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...   131   1e-31
ref|XP_003552630.1| PREDICTED: proline dehydrogenase 2, mitochon...   134   2e-31
ref|XP_003555073.1| PREDICTED: proline dehydrogenase 2, mitochon...   133   2e-31

>dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 481

 Score =  134 bits (337), Expect(2) = 9e-32
 Identities = 63/97 (64%), Positives = 80/97 (82%)
 Frame = -1

Query: 342 HGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 163
           HGSIQ+TH CYN CA+F++E+V  G+ +V+LATHN+ESG++AAA+AQ LGIGKG+  LQF
Sbjct: 348 HGSIQDTHDCYNGCAAFLLERVRRGSASVMLATHNVESGQLAAARAQELGIGKGDRNLQF 407

Query: 162 DELKGMANELLFGLRNAGFQVSKYFPYDPVEMVMPIL 52
            +L GMA+ L  GLRNAGFQVSKY PY PVE ++P L
Sbjct: 408 AQLMGMADGLSLGLRNAGFQVSKYLPYGPVEHIIPYL 444



 Score = 30.8 bits (68), Expect(2) = 9e-32
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 59  PYFL*RAEENRGLLSAS 9
           PY + RAEENRGLLSAS
Sbjct: 442 PYLIRRAEENRGLLSAS 458


>ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|222848255|gb|EEE85802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score =  134 bits (336), Expect(2) = 9e-32
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = -1

Query: 342 HGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 163
           H SIQETHACYN+CASFM+EK+   + AV+LATHN+ESG++AA KA  LGI KGN KL+F
Sbjct: 305 HNSIQETHACYNDCASFMLEKIANSSDAVILATHNVESGRLAATKALDLGIRKGNPKLEF 364

Query: 162 DELKGMANELLFGLRNAGFQVSKYFPYDPVEMVMPIL 52
            +L GM++ L FGL NAGF VSKY PY PVE V+P L
Sbjct: 365 AQLYGMSDALSFGLSNAGFLVSKYMPYGPVEKVIPYL 401



 Score = 31.2 bits (69), Expect(2) = 9e-32
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -2

Query: 59  PYFL*RAEENRGLLSASTL 3
           PY L RAEENRGLLS S++
Sbjct: 399 PYLLRRAEENRGLLSTSSI 417


>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score =  131 bits (329), Expect(2) = 1e-31
 Identities = 63/97 (64%), Positives = 77/97 (79%)
 Frame = -1

Query: 342 HGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 163
           H SI+ETHAC+N CASF++E++  G+GAVVLATHNLESGK+ A KA+ LGI K + K+QF
Sbjct: 366 HNSIEETHACFNGCASFLLERIAGGSGAVVLATHNLESGKLLATKARDLGISKEDHKVQF 425

Query: 162 DELKGMANELLFGLRNAGFQVSKYFPYDPVEMVMPIL 52
            +L GM+  L FGLRNAGFQVSKY  + PVE VMP L
Sbjct: 426 AQLYGMSESLSFGLRNAGFQVSKYMAFGPVEKVMPYL 462



 Score = 33.5 bits (75), Expect(2) = 1e-31
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = -2

Query: 59  PYFL*RAEENRGLLSASTL 3
           PY L RAEENRGLLS STL
Sbjct: 460 PYLLRRAEENRGLLSTSTL 478


>ref|XP_003552630.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine
           max]
          Length = 489

 Score =  134 bits (337), Expect(2) = 2e-31
 Identities = 63/97 (64%), Positives = 77/97 (79%)
 Frame = -1

Query: 342 HGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 163
           H +I++TH C+N+C+SFM+EKV  G G VVLATHN+ESGK+AAAKA  LG+GK N KL+F
Sbjct: 359 HNTIEDTHKCFNDCSSFMLEKVANGPGGVVLATHNVESGKLAAAKAHELGVGKVNHKLEF 418

Query: 162 DELKGMANELLFGLRNAGFQVSKYFPYDPVEMVMPIL 52
            +L GM+  L FGL NAGFQVSKY P+ PVE VMP L
Sbjct: 419 AQLHGMSEALSFGLSNAGFQVSKYMPFGPVETVMPYL 455



 Score = 29.6 bits (65), Expect(2) = 2e-31
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 59  PYFL*RAEENRGLLSAS 9
           PY L RAEENRG+L+AS
Sbjct: 453 PYLLRRAEENRGMLAAS 469


>ref|XP_003555073.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like [Glycine
           max]
          Length = 500

 Score =  133 bits (334), Expect(2) = 2e-31
 Identities = 61/97 (62%), Positives = 77/97 (79%)
 Frame = -1

Query: 342 HGSIQETHACYNECASFMIEKVFTGTGAVVLATHNLESGKVAAAKAQGLGIGKGNLKLQF 163
           H +IQ+TH C+N+C+SFM+EK+  G G+VVLATHN+ESGK+A AKA  LG+GK N KL+F
Sbjct: 370 HNTIQDTHNCFNDCSSFMLEKIANGIGSVVLATHNIESGKLAVAKAHELGVGKVNHKLEF 429

Query: 162 DELKGMANELLFGLRNAGFQVSKYFPYDPVEMVMPIL 52
            +L GM+  L FGL N GFQVSKY P+ PV+MVMP L
Sbjct: 430 AQLYGMSEALSFGLNNEGFQVSKYMPFGPVDMVMPYL 466



 Score = 30.4 bits (67), Expect(2) = 2e-31
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 59  PYFL*RAEENRGLLSAS 9
           PY L RAEENRGLL+AS
Sbjct: 464 PYLLRRAEENRGLLAAS 480


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