BLASTX nr result
ID: Coptis24_contig00015655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00015655
(871 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003628563.1| Multidrug resistance protein ABC transporter... 220 1e-97
ref|XP_001770208.1| ATP-binding cassette transporter, subfamily ... 202 3e-86
ref|XP_002978490.1| hypothetical protein SELMODRAFT_108621 [Sela... 169 2e-75
ref|XP_002970411.1| ATP-binding cassette transporter, subfamily ... 167 7e-75
ref|XP_001785886.1| ATP-binding cassette transporter, subfamily ... 186 3e-70
>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
truncatula] gi|355522585|gb|AET03039.1| Multidrug
resistance protein ABC transporter family [Medicago
truncatula]
Length = 1498
Score = 220 bits (560), Expect(2) = 1e-97
Identities = 100/147 (68%), Positives = 129/147 (87%), Gaps = 1/147 (0%)
Frame = +2
Query: 431 VENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHGDVDIKDLQVRYRPNSPLILEGI 610
VEN+M+SVERIKQF N+PSEAPW I D P NWP+HG +++ +LQVRYR N+PL+L+GI
Sbjct: 1219 VENKMVSVERIKQFTNLPSEAPWKIADKSPPQNWPSHGTIELNNLQVRYRANTPLVLKGI 1278
Query: 611 TLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKICIDVVDISTLGVHDLRSRFGII 787
+L+I+G EK+G+VGRTGSGKSTL+Q FR+IE S GK+ ID ++IS +G+HDLRSRFGII
Sbjct: 1279 SLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKVMIDGINISNVGLHDLRSRFGII 1338
Query: 788 PQEPVLFQGTIRSNIDPIGIYSDKEIW 868
PQEPVLFQGT+R+NIDP+G+YS++EIW
Sbjct: 1339 PQEPVLFQGTVRTNIDPLGLYSEEEIW 1365
Score = 163 bits (413), Expect(2) = 1e-97
Identities = 81/143 (56%), Positives = 98/143 (68%)
Frame = +3
Query: 3 WPTIFLIIPLVWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQT 182
W T+FL+IPL W N YR YYLATSRELTRLDSITKAPVIHHFSE+++GVMTIRS +KQ
Sbjct: 1077 WETVFLVIPLFWLNNRYRIYYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSLRKQN 1136
Query: 183 KFWQETINRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKPGFXX 362
F QE I++++A+LRM FHNNGANEW GFR + G LC + LFM+ LPS K +
Sbjct: 1137 TFCQENIDKVNASLRMDFHNNGANEWLGFRLDYNGVVFLCTATLFMIFLPSSFVKSEYVG 1196
Query: 363 XXXXXXXXXXXXXFFAVYMSCFV 431
F++ MSC V
Sbjct: 1197 MSLSYGLALSGLLSFSMTMSCNV 1219
>ref|XP_001770208.1| ATP-binding cassette transporter, subfamily C, member 4, group MRP
protein PpABCC4 [Physcomitrella patens subsp. patens]
gi|162678585|gb|EDQ65042.1| ATP-binding cassette
transporter, subfamily C, member 4, group MRP protein
PpABCC4 [Physcomitrella patens subsp. patens]
Length = 1262
Score = 202 bits (513), Expect(2) = 3e-86
Identities = 92/147 (62%), Positives = 126/147 (85%), Gaps = 1/147 (0%)
Frame = +2
Query: 431 VENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHGDVDIKDLQVRYRPNSPLILEGI 610
+EN+M+SVERI+QF NIPSEAP + + P+ NWP+ G ++IK+LQ+RYRP +PL+L+GI
Sbjct: 975 LENKMVSVERIRQFTNIPSEAPSIVPERRPAANWPSTGAIEIKNLQLRYRPGTPLVLKGI 1034
Query: 611 TLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKICIDVVDISTLGVHDLRSRFGII 787
++ I G +K+G+VGRTGSGKSTL+Q+ FR++E S G+I +D +DI+TLG+HDLRS+FGII
Sbjct: 1035 SVRISGGDKVGVVGRTGSGKSTLIQALFRLVEASAGQIVVDGIDIATLGLHDLRSKFGII 1094
Query: 788 PQEPVLFQGTIRSNIDPIGIYSDKEIW 868
PQEP LF+GTIR+NIDP+G +SD EIW
Sbjct: 1095 PQEPTLFEGTIRANIDPLGEHSDVEIW 1121
Score = 144 bits (362), Expect(2) = 3e-86
Identities = 65/141 (46%), Positives = 94/141 (66%)
Frame = +3
Query: 3 WPTIFLIIPLVWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQT 182
WP I ++IPL + + Y+ YY+A+SRELTR+DSITKAP+IHHFSES+AG M +R FKK+
Sbjct: 833 WPIILVMIPLAYVYVLYQAYYIASSRELTRMDSITKAPIIHHFSESIAGFMVLRCFKKEH 892
Query: 183 KFWQETINRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKPGFXX 362
+F Q ++R++ N+ M FHNNGA EW GFR E++G+ VLC A +V+LP+ P
Sbjct: 893 EFSQVNMDRVNQNICMVFHNNGATEWLGFRLEMMGTVVLCALAFLLVVLPARLAPPQLVG 952
Query: 363 XXXXXXXXXXXXXFFAVYMSC 425
++ V+++C
Sbjct: 953 LALSYGLTLNQLFYWTVWLAC 973
>ref|XP_002978490.1| hypothetical protein SELMODRAFT_108621 [Selaginella moellendorffii]
gi|300153839|gb|EFJ20476.1| hypothetical protein
SELMODRAFT_108621 [Selaginella moellendorffii]
Length = 1406
Score = 169 bits (427), Expect(2) = 2e-75
Identities = 80/169 (47%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Frame = +2
Query: 365 ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 544
+S+ + ++ G + I+ + +E M++VERI QF +I +E KD P +WP G
Sbjct: 1094 LSLSYGLALSGCLNYMIFNICQIEQNMVAVERILQFSSIEAEEQGAGKDAGPGVSWPQSG 1153
Query: 545 DVDIKDLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 721
+V ++ LQ+RYRP PL+L+ +T +QG EK+G+VGRTGSGKS+ +Q+ FR++E G I
Sbjct: 1154 NVAVQSLQLRYRPGLPLVLKDVTFVVQGGEKLGVVGRTGSGKSSFIQALFRLVEPVQGTI 1213
Query: 722 CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 868
ID +DI ++ ++DLRSR IIPQ+P LF+GT+RSNIDP+G+Y D+EIW
Sbjct: 1214 FIDGIDIRSISLNDLRSRLSIIPQDPTLFEGTVRSNIDPLGMYQDEEIW 1262
Score = 140 bits (354), Expect(2) = 2e-75
Identities = 63/118 (53%), Positives = 85/118 (72%)
Frame = +3
Query: 3 WPTIFLIIPLVWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQT 182
W + +++PL W Y+ Y++ATSRELTRL SIT APVIHHF E++AG+M+IR+F Q
Sbjct: 974 WQLLLVLLPLAWIYFKYQRYFIATSRELTRLKSITDAPVIHHFKETIAGLMSIRAFGHQE 1033
Query: 183 KFWQETINRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKPGF 356
+F + ++R+D N+RM+FHN AN+W FR E IG +LCFSALF+VLLP P F
Sbjct: 1034 RFARVNMDRIDTNVRMSFHNGAANDWLSFRLETIGIVILCFSALFLVLLPKSFVNPEF 1091
>ref|XP_002970411.1| ATP-binding cassette transporter, subfamily C, member 4, SmABCC4
[Selaginella moellendorffii] gi|300161927|gb|EFJ28541.1|
ATP-binding cassette transporter, subfamily C, member 4,
SmABCC4 [Selaginella moellendorffii]
Length = 1404
Score = 167 bits (424), Expect(2) = 7e-75
Identities = 80/169 (47%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Frame = +2
Query: 365 ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 544
+S+ + ++ G + I+ + +E M++VERI QF +I +E KD P +WP G
Sbjct: 1092 LSLSYGLALSGCLNYMIFYICQIEQNMVAVERILQFSSIEAEEQSAGKDAGPGVSWPQSG 1151
Query: 545 DVDIKDLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 721
+V ++ LQ+RYRP PL+L+ +T +QG EK+G+VGRTGSGKS+ +Q+ FR++E G I
Sbjct: 1152 NVAVQSLQLRYRPGLPLVLKDVTFVVQGGEKLGVVGRTGSGKSSFIQALFRLVEPVQGTI 1211
Query: 722 CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 868
ID +DI ++ ++DLRSR IIPQ+P LF+GT+RSNIDP+G+Y D+EIW
Sbjct: 1212 FIDGIDIRSISLNDLRSRLSIIPQDPTLFEGTVRSNIDPLGMYQDEEIW 1260
Score = 140 bits (352), Expect(2) = 7e-75
Identities = 63/118 (53%), Positives = 84/118 (71%)
Frame = +3
Query: 3 WPTIFLIIPLVWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQT 182
W + +++PL W Y+ Y++ATSRELTRL SIT APVIHHF E++AG+M+IR+F Q
Sbjct: 972 WQLLLVLLPLAWIYFKYQRYFIATSRELTRLKSITDAPVIHHFKETIAGLMSIRAFGHQE 1031
Query: 183 KFWQETINRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKPGF 356
+F + + R+D N+RM+FHN AN+W FR E IG +LCFSALF+VLLP P F
Sbjct: 1032 RFARVNMERIDINVRMSFHNGAANDWLSFRLETIGIVILCFSALFLVLLPKSFVNPEF 1089
>ref|XP_001785886.1| ATP-binding cassette transporter, subfamily C, member 12, group MRP
protein PpABCC12 [Physcomitrella patens subsp. patens]
gi|162662440|gb|EDQ49295.1| ATP-binding cassette
transporter, subfamily C, member 12, group MRP protein
PpABCC12 [Physcomitrella patens subsp. patens]
Length = 1397
Score = 186 bits (472), Expect(2) = 3e-70
Identities = 90/147 (61%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = +2
Query: 431 VENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHGDVDIKDLQVRYRPNSPLILEGI 610
+ N +ISVERIKQ++N+ SEAP I + PS +WP+ G V++++LQVRYR NSPL+L GI
Sbjct: 1116 LSNTIISVERIKQYMNLVSEAPAVIPNKRPSLHWPSTGRVELENLQVRYRSNSPLVLRGI 1175
Query: 611 TLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKICIDVVDISTLGVHDLRSRFGII 787
T QG +K+G+VGRTGSGK+TL+ S FR++E +GG+I ID +DIST+G+HDLRSR GII
Sbjct: 1176 TCIFQGGQKVGVVGRTGSGKTTLIGSLFRLVEPAGGRILIDGIDISTIGLHDLRSRLGII 1235
Query: 788 PQEPVLFQGTIRSNIDPIGIYSDKEIW 868
PQEP LF+GT+R N+DPI +SD EIW
Sbjct: 1236 PQEPTLFRGTVRFNLDPIDEHSDAEIW 1262
Score = 106 bits (264), Expect(2) = 3e-70
Identities = 51/118 (43%), Positives = 77/118 (65%)
Frame = +3
Query: 3 WPTIFLIIPLVWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQT 182
W +F++IP ++ + YYLA++R++ R++ TKAP+++HF+E++AG TIR+FKKQ
Sbjct: 974 WQILFIVIPFIYAARKLQLYYLASARQIMRINGTTKAPIVNHFAEAIAGGSTIRAFKKQA 1033
Query: 183 KFWQETINRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKPGF 356
F E ++ +DAN FH+ A EW R E + + VL SALF+VLLP PGF
Sbjct: 1034 DFAVENLSLIDANASPFFHSFAAIEWLILRLEFLSATVLVASALFIVLLPEGHINPGF 1091