BLASTX nr result

ID: Coptis24_contig00015653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015653
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33414.1| unknown [Lotus japonicus]                               82   5e-14
ref|XP_003542629.1| PREDICTED: uncharacterized protein LOC100805...    77   1e-12
ref|XP_002308977.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|AFK40462.1| unknown [Medicago truncatula]                           75   7e-12
ref|XP_003609366.1| Blue copper protein [Medicago truncatula] gi...    75   7e-12

>gb|AFK33414.1| unknown [Lotus japonicus]
          Length = 203

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/69 (53%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 ACSMNRLVGFLFVAISLLHCTSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRVNDTL 30
           A +MN L+  L  A +L HC+SAQT H+VGD++GW VP  + +FY+SWA++ TF V DTL
Sbjct: 2   AMNMNALLLALLAATALFHCSSAQTRHVVGDSAGWFVP-GNTSFYTSWAAKNTFAVGDTL 60

Query: 29  VFNFASARH 3
           VFN+A++ H
Sbjct: 61  VFNYAASAH 69


>ref|XP_003542629.1| PREDICTED: uncharacterized protein LOC100805802 [Glycine max]
          Length = 336

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/59 (55%), Positives = 44/59 (74%)
 Frame = -3

Query: 179 LFVAISLLHCTSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRVNDTLVFNFASARH 3
           LF   +LLH ++AQT H+VGDA+GW +P      Y++WAS +TF VNDTLVFNFA+ +H
Sbjct: 9   LFAVATLLHGSAAQTRHMVGDATGWIIPAGGAATYTAWASNKTFTVNDTLVFNFATGQH 67



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = -3

Query: 149 TSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRVNDTLVFNFASARH 3
           +S   T IVG+ +GW VP  + +FY++WAS + FRV D LVFN+AS  H
Sbjct: 175 SSEPATFIVGETAGWIVP-GNASFYTAWASGKNFRVGDVLVFNYASNTH 222


>ref|XP_002308977.1| predicted protein [Populus trichocarpa] gi|222854953|gb|EEE92500.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = -3

Query: 212 AACSMNRLVGFLFVAIS---LLHCTSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRV 42
           AA S+      +FV+I+   L+  + AQTTH VGD +GWA+P  DP FYSSWA+ QTF V
Sbjct: 140 AASSLVATFALMFVSIAITALVQTSVAQTTHTVGDTTGWAIPTGDPAFYSSWAANQTFNV 199

Query: 41  NDTLVFNFASARH 3
            + LVFNF +  H
Sbjct: 200 GEILVFNFMANAH 212


>gb|AFK40462.1| unknown [Medicago truncatula]
          Length = 229

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -3

Query: 179 LFVAISLLHCTSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRVNDTLVFNFASARH 3
           L VA +L H + AQT H+VGD +GW +P    +FY++WAS +TF V DTLVFN+AS +H
Sbjct: 13  LAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYASGQH 71


>ref|XP_003609366.1| Blue copper protein [Medicago truncatula]
           gi|355510421|gb|AES91563.1| Blue copper protein
           [Medicago truncatula]
          Length = 370

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/59 (54%), Positives = 43/59 (72%)
 Frame = -3

Query: 179 LFVAISLLHCTSAQTTHIVGDASGWAVPLADPTFYSSWASRQTFRVNDTLVFNFASARH 3
           L VA +L H + AQT H+VGD +GW +P    +FY++WAS +TF V DTLVFN+AS +H
Sbjct: 13  LAVAANLFHGSFAQTRHVVGDTTGWTIPTNGASFYTNWASNKTFTVGDTLVFNYASGQH 71


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