BLASTX nr result

ID: Coptis24_contig00015651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015651
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298114.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002303262.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003633137.1| PREDICTED: uncharacterized protein LOC100854...   124   2e-26
emb|CAN71657.1| hypothetical protein VITISV_030821 [Vitis vinifera]   118   1e-24
ref|NP_001239669.1| uncharacterized protein LOC100780553 [Glycin...   117   1e-24

>ref|XP_002298114.1| predicted protein [Populus trichocarpa] gi|222845372|gb|EEE82919.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 5/126 (3%)
 Frame = +1

Query: 37  MASSSTLLTLRPAGIRPSSSTHRKPDTICRSSQSSSWWTPLFGWSSDPDYIDGNG----- 201
           MAS  T     PA +R SS + R PD   + S SS+WW+PLFGWSS PDY++GN      
Sbjct: 1   MASVLTFACSVPAPVRASSGSPRTPDPYGKKSGSSTWWSPLFGWSSSPDYLNGNSIAGGT 60

Query: 202 GSSLTKASKNNTNADLEVSSSRSRFAPGGFTEEKAKQLRVRTAETTTFHDIMYHSAIATR 381
           G  +       + +D E    RSRFA G FTEEKAKQLR +T E +TFHD+MYHSAIA+R
Sbjct: 61  GDDVPDKESGLSGSDQEPGRPRSRFALGSFTEEKAKQLRRKTLEGSTFHDMMYHSAIASR 120

Query: 382 LASDRS 399
           LASD S
Sbjct: 121 LASDGS 126


>ref|XP_002303262.1| predicted protein [Populus trichocarpa] gi|222840694|gb|EEE78241.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  124 bits (312), Expect = 1e-26
 Identities = 67/129 (51%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
 Frame = +1

Query: 37  MASSSTLLTLRPAGIRPSSSTHRKPDTICRSSQSSSWWTPLFGWSSDPDYIDGN--GGSS 210
           MAS+       PA +R SS + RKPD   + S SS+WW PLFGWSS PDYI+    GGS+
Sbjct: 1   MASTLAFACSLPAPVRASSGSSRKPDPCGKKSGSSTWWAPLFGWSSSPDYINSGSAGGST 60

Query: 211 ---LTKASKNNTNADLEVSSSRSRFAPGGFTEEKAKQLRVRTAETTTFHDIMYHSAIATR 381
              +       + +D E    RSRFA G FTEEKA++LR +T E  TFHD+MYHSAIA+R
Sbjct: 61  SDDIPYKESGVSGSDQEPGRPRSRFALGSFTEEKARRLRRKTVEGITFHDMMYHSAIASR 120

Query: 382 LASDRSSHP 408
           LASD S  P
Sbjct: 121 LASDGSGQP 129


>ref|XP_003633137.1| PREDICTED: uncharacterized protein LOC100854031 [Vitis vinifera]
          Length = 121

 Score =  124 bits (310), Expect = 2e-26
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 3/122 (2%)
 Frame = +1

Query: 37  MASSSTLLTLRPAGIRP---SSSTHRKPDTICRSSQSSSWWTPLFGWSSDPDYIDGNGGS 207
           M+ ++ L++ RP GIR    S  +HR+       S SS+WWTPLFGWS DPDYID    +
Sbjct: 1   MSMATDLISFRPIGIRACAASCDSHRR-------STSSNWWTPLFGWSPDPDYIDPETKT 53

Query: 208 SLTKASKNNTNADLEVSSSRSRFAPGGFTEEKAKQLRVRTAETTTFHDIMYHSAIATRLA 387
                +++ +  DLE  +SRSR+APG FTEEKAKQLR+ T  T++FHD MYHSAIA+RLA
Sbjct: 54  P-NPVAQSRSEQDLETKTSRSRYAPGCFTEEKAKQLRLVTTSTSSFHDAMYHSAIASRLA 112

Query: 388 SD 393
           SD
Sbjct: 113 SD 114


>emb|CAN71657.1| hypothetical protein VITISV_030821 [Vitis vinifera]
          Length = 119

 Score =  118 bits (295), Expect = 1e-24
 Identities = 64/117 (54%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
 Frame = +1

Query: 46  SSTLLTLRPAGIRPSS-STHRKPDTICRSSQSSSWWTPLFGWSSDPDYIDGNGGSSLTKA 222
           +STL    P GIR S+ S  RK D   R +   +WW+P+FGWSSDPDYI G    S  K+
Sbjct: 2   ASTLSVFNPTGIRASAVSGPRKLDQNRRRASQPTWWSPIFGWSSDPDYIVGE---SAEKS 58

Query: 223 SKNNTNADLEVSSSRSRFAPGGFTEEKAKQLRVRTAETTTFHDIMYHSAIATRLASD 393
           +      D E + SRSRF  G FTEEKAKQLR +T E+ +FHDIMYHS+IA+RLASD
Sbjct: 59  AGAQEGKDSETARSRSRFTLGCFTEEKAKQLRRKTMESASFHDIMYHSSIASRLASD 115


>ref|NP_001239669.1| uncharacterized protein LOC100780553 [Glycine max]
           gi|255640770|gb|ACU20669.1| unknown [Glycine max]
          Length = 123

 Score =  117 bits (294), Expect = 1e-24
 Identities = 68/121 (56%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
 Frame = +1

Query: 37  MASSSTLLTLRPAGIRP-SSSTHRKPDTICRSSQSSSWWTPLFGWSSDPDYIDGNG-GSS 210
           MA+SS  + +R AGI+P ++S HR+ D   R + S+SWWTPLFGWSS+PDYID N   SS
Sbjct: 1   MAASS--IPIRVAGIQPCATSGHRRTDPDRRRASSTSWWTPLFGWSSEPDYIDSNNRASS 58

Query: 211 LTKASKNNTNADLEVSSSRSRFAPGGFTEEKAKQLRVRTAETTTFHDIMYHSAIATRLAS 390
           L +       A  E  + R RFA G FTEEKAKQLR+ T++  +FHD MYHSAIA+RLAS
Sbjct: 59  LQRTKPEPVTAATESKAPRPRFA-GCFTEEKAKQLRMMTSK--SFHDTMYHSAIASRLAS 115

Query: 391 D 393
           D
Sbjct: 116 D 116