BLASTX nr result
ID: Coptis24_contig00015635
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015635 (525 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|... 222 2e-56 ref|NP_039415.1| cytochrome b6 [Oryza sativa Japonica Group] gi|... 222 2e-56 gb|ACT79803.1| petB [Fuchsia thymifolia] 222 2e-56 gb|ACT79789.1| petB [Fuchsia pachyrrhiza] 222 2e-56 gb|ACT79731.1| petB [Circaea canadensis subsp. quadrisulcata] 222 2e-56 >gb|AAA85375.1| apocytochrome b6 (alt.) [Oryza sativa] gi|226762|prf||1604469A cytochrome b6 Length = 232 Score = 222 bits (566), Expect = 2e-56 Identities = 110/111 (99%), Positives = 110/111 (99%) Frame = -1 Query: 363 YLTGGFKKPRELTWVTGVVLAVLTASFGVIGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 184 YLTGGFKKPRELTWVTGVVLAVLTASFGV GYSLPWDQIGYWAVKIVTGVPDAIPVIGSP Sbjct: 122 YLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 181 Query: 183 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 31 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL Sbjct: 182 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232 >ref|NP_039415.1| cytochrome b6 [Oryza sativa Japonica Group] gi|50234001|ref|YP_052779.1| cytochrome b6 [Oryza nivara] gi|374249296|ref|YP_005088039.1| petB gene product [Leersia tisserantii] gi|374249649|ref|YP_005089176.1| petB gene product [Rhynchoryza subulata] gi|117818|sp|P12123.1|CYB6_ORYSJ RecName: Full=Cytochrome b6 gi|38605633|sp|P60161.1|CYB6_HORVU RecName: Full=Cytochrome b6 gi|38605634|sp|P60162.1|CYB6_WHEAT RecName: Full=Cytochrome b6 gi|61212574|sp|Q6ENE4.1|CYB6_ORYNI RecName: Full=Cytochrome b6 gi|148872480|sp|P0C316.1|CYB6_ORYSI RecName: Full=Cytochrome b6 gi|148897907|sp|P0C315.1|CYB6_ORYSA RecName: Full=Cytochrome b6 gi|343209|gb|AAA85374.1| apocytochrome b6 [Oryza sativa] gi|669082|emb|CAA33977.1| cytochrome B6 [Oryza sativa Japonica Group] gi|49615025|dbj|BAD26808.1| cytochrome b6 [Oryza nivara] gi|346228333|gb|AEO21207.1| cytochrome b6 [Leersia tisserantii] gi|346228501|gb|AEO21373.1| cytochrome b6 [Rhynchoryza subulata] gi|353685083|gb|AER12848.1| cytochrome b6 (chloroplast) [Oryza sativa Indica Group] gi|353685171|gb|AER12935.1| cytochrome b6 (chloroplast) [Oryza sativa Indica Group] gi|226638|prf||1603356BM cytochrome b6 Length = 215 Score = 222 bits (566), Expect = 2e-56 Identities = 110/111 (99%), Positives = 110/111 (99%) Frame = -1 Query: 363 YLTGGFKKPRELTWVTGVVLAVLTASFGVIGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 184 YLTGGFKKPRELTWVTGVVLAVLTASFGV GYSLPWDQIGYWAVKIVTGVPDAIPVIGSP Sbjct: 105 YLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 164 Query: 183 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 31 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL Sbjct: 165 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215 >gb|ACT79803.1| petB [Fuchsia thymifolia] Length = 138 Score = 222 bits (566), Expect = 2e-56 Identities = 110/111 (99%), Positives = 110/111 (99%) Frame = -1 Query: 363 YLTGGFKKPRELTWVTGVVLAVLTASFGVIGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 184 YLTGGFKKPRELTWVTGVVLAVLTASFGV GYSLPWDQIGYWAVKIVTGVPDAIPVIGSP Sbjct: 28 YLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 87 Query: 183 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 31 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL Sbjct: 88 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 138 >gb|ACT79789.1| petB [Fuchsia pachyrrhiza] Length = 138 Score = 222 bits (566), Expect = 2e-56 Identities = 110/111 (99%), Positives = 110/111 (99%) Frame = -1 Query: 363 YLTGGFKKPRELTWVTGVVLAVLTASFGVIGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 184 YLTGGFKKPRELTWVTGVVLAVLTASFGV GYSLPWDQIGYWAVKIVTGVPDAIPVIGSP Sbjct: 28 YLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 87 Query: 183 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 31 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL Sbjct: 88 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 138 >gb|ACT79731.1| petB [Circaea canadensis subsp. quadrisulcata] Length = 138 Score = 222 bits (566), Expect = 2e-56 Identities = 110/111 (99%), Positives = 110/111 (99%) Frame = -1 Query: 363 YLTGGFKKPRELTWVTGVVLAVLTASFGVIGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 184 YLTGGFKKPRELTWVTGVVLAVLTASFGV GYSLPWDQIGYWAVKIVTGVPDAIPVIGSP Sbjct: 28 YLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSP 87 Query: 183 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 31 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL Sbjct: 88 LVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 138