BLASTX nr result

ID: Coptis24_contig00015630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015630
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276526.2| PREDICTED: transcription factor MYB75-like [...   151   2e-34
ref|XP_002318546.1| predicted protein [Populus trichocarpa] gi|2...   136   5e-30
gb|AFM77857.1| myb domain protein [Hevea brasiliensis]                122   1e-25
ref|XP_003555909.1| PREDICTED: transcription factor MYB21-like [...   110   4e-22
ref|XP_002534590.1| DNA binding protein, putative [Ricinus commu...   108   2e-21

>ref|XP_002276526.2| PREDICTED: transcription factor MYB75-like [Vitis vinifera]
           gi|297734217|emb|CBI15464.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score =  151 bits (381), Expect = 2e-34
 Identities = 97/227 (42%), Positives = 113/227 (49%), Gaps = 24/227 (10%)
 Frame = -2

Query: 853 SRIAQHLPGRTDNEIKNYWRTRVQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXX 674
           S+IAQHLPGRTDNEIKNYWRTRVQKQARHL ID+NS  F+D IRC WMPRLLQKIE +  
Sbjct: 96  SKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDSNSRAFQDVIRCVWMPRLLQKIEGSSS 155

Query: 673 XXXXXXXXXXXXPLLPNPAPQGSLLQAPPP-----PSQMSLDIRQM--------RCFXXX 533
                         L +   Q     APPP     P Q  L I +         +     
Sbjct: 156 TSSTTSQVSIIPQSLNHADSQQHSAAAPPPVVAQAPVQGPLSINETINNLEHNEKNSSSE 215

Query: 532 XXXXXXXXXXXXXXXXSVPETTGYPTSP----------SAIVNLASNPYLQDCDMEAFNL 383
                            + +   YPTSP          S ++    N    + +ME FNL
Sbjct: 216 NCTSPSICSSESMNISQISQIPDYPTSPFQAMSNSDDYSTLLKGYYNVDNSNYEMETFNL 275

Query: 382 DHMSTIMGS-ENSISDRQMVESYWVNDEEADGLWNMDELW*FRKLQE 245
             MS   G  EN + D  MVES WV+ + AD LWNMDELW F KLQE
Sbjct: 276 ASMSAPQGDFENPVGDCPMVESNWVDSDLADSLWNMDELWQFWKLQE 322


>ref|XP_002318546.1| predicted protein [Populus trichocarpa] gi|222859219|gb|EEE96766.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  136 bits (343), Expect = 5e-30
 Identities = 97/228 (42%), Positives = 111/228 (48%), Gaps = 22/228 (9%)
 Frame = -2

Query: 853 SRIAQHLPGRTDNEIKNYWRTRVQKQARHLNIDANSTRFRDAIRCFWMPRLLQKI-EENX 677
           S+IAQHLPGRTDNEIKNYWRTRVQKQARHL IDANST F+D IR  WMPRLLQKI   + 
Sbjct: 100 SKIAQHLPGRTDNEIKNYWRTRVQKQARHLRIDANSTAFQDIIRRSWMPRLLQKIGGSST 159

Query: 676 XXXXXXXXXXXXXPLLPNPAPQGSLL-QAPPPPSQMS--LDIR-QMRCF-------XXXX 530
                         L+PN APQ S    A PPP Q    LD+   M C            
Sbjct: 160 SSSAMTCQSPAVSQLIPNYAPQLSAFPTALPPPQQQEAPLDMSVMMHCMEHREQTSDSEH 219

Query: 529 XXXXXXXXXXXXXXXSVPETTGYPTSPSAIV--NLASNPYLQDC--------DMEAFNLD 380
                           +   + YP SP   +  N   +  ++DC        DMEA NL 
Sbjct: 220 GTSSCISSAESMNVSQMSHLSEYPKSPFQAMGNNGDYSTLVKDCYYVDSNFYDMEAINLA 279

Query: 379 HMSTIMGSENSISDRQMVESYWVNDEEADGLWNMDELW*FRKLQESNI 236
            MS       S  DR M +  W   +  D +WNMDELW FR LQ   I
Sbjct: 280 TMSVPGELGISAVDRHMGDGDWAGYDFGDTVWNMDELWQFRNLQGKEI 327


>gb|AFM77857.1| myb domain protein [Hevea brasiliensis]
          Length = 314

 Score =  122 bits (305), Expect = 1e-25
 Identities = 77/212 (36%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
 Frame = -2

Query: 853 SRIAQHLPGRTDNEIKNYWRTRVQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXX 674
           S+IAQHLPGRTDNEIKNYWRTRVQKQARHL +DANST F+D I+CFW+PRLLQKIE +  
Sbjct: 104 SKIAQHLPGRTDNEIKNYWRTRVQKQARHLKVDANSTAFQDIIKCFWIPRLLQKIEGSST 163

Query: 673 XXXXXXXXXXXXPLLPNPAPQGSL--------LQAPPPPSQMSLDI------RQMRCFXX 536
                        L  NP              L  P PP Q+  ++              
Sbjct: 164 SCSSTSTSSSSTILSQNPTVVSDQPVNYSAHDLPFPIPPPQLPQEVSGNLQGNLDHNSDS 223

Query: 535 XXXXXXXXXXXXXXXXXSVPETTGYPTSPSAIVNLASNPYLQDC---DMEAFNLDHMSTI 365
                             + + + YPTSP   +    + + +DC   D   +N++ M+  
Sbjct: 224 EHGSNSCISSTESMNISQISQLSEYPTSPFHPI----STFQKDCYYVDSGCYNMESMTPA 279

Query: 364 MGSENSISDRQMVESYWVNDEEADGLWNMDEL 269
             S  +   + + ES WV  +  D +W+MDEL
Sbjct: 280 TLSVPAGVFQNVAESNWVGYDFGDNIWSMDEL 311


>ref|XP_003555909.1| PREDICTED: transcription factor MYB21-like [Glycine max]
          Length = 307

 Score =  110 bits (275), Expect = 4e-22
 Identities = 75/214 (35%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
 Frame = -2

Query: 853 SRIAQHLPGRTDNEIKNYWRTRVQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXX 674
           S+IAQHLPGRTDNEIKNYWRTRVQKQAR LNI++ S RF DA++CFWMPRLLQK+E++  
Sbjct: 96  SKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQSNS 155

Query: 673 XXXXXXXXXXXXPLLPNPAPQGSL---------LQAPPPPSQMSLDIRQMRCFXXXXXXX 521
                             A   S+         + +   P Q    +     F       
Sbjct: 156 PSPQSSMTTMMNLGNSGEASMSSMSSSFNINPSMSSSSSPPQRKFIMDDANHFSTMSNPI 215

Query: 520 XXXXXXXXXXXXSVPETTGYPTSPSAIV--NLASNPYLQDC-------DMEAFNLDHMST 368
                          E + +P SP  +   N+ S P   +C        ME  N+D +S 
Sbjct: 216 NPSPDSFQFSQPL--EISEHPKSPPNVFENNVCSYPIQDNCYLDTNNYGMEGINMDPLSA 273

Query: 367 IMGSENSISDRQMVESYWVNDEEADG-LWNMDEL 269
           +   + S  D Q   + W+ D   D  LWNMD +
Sbjct: 274 MDTYDFSQFDFQTAGNGWMLDSMGDSTLWNMDAM 307


>ref|XP_002534590.1| DNA binding protein, putative [Ricinus communis]
           gi|223524969|gb|EEF27793.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 260

 Score =  108 bits (269), Expect = 2e-21
 Identities = 48/56 (85%), Positives = 53/56 (94%)
 Frame = -2

Query: 853 SRIAQHLPGRTDNEIKNYWRTRVQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIE 686
           S+IAQHLPGRTDNEIKNYWRTRVQKQARHL IDANST F++ +RCFW+PRLLQKIE
Sbjct: 104 SKIAQHLPGRTDNEIKNYWRTRVQKQARHLKIDANSTAFQEIVRCFWIPRLLQKIE 159


Top