BLASTX nr result

ID: Coptis24_contig00015628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015628
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_002459155.1| hypothetical protein SORBIDRAFT_03g046820 [S...    91   1e-16
emb|CBI24703.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus...    89   5e-16

>ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|222848737|gb|EEE86284.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/53 (84%), Positives = 52/53 (98%)
 Frame = +2

Query: 95  MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESI 253
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ ISS++G++VRLTKELLAACESI
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISSDSGEQVRLTKELLAACESI 53


>ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|222874717|gb|EEF11848.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +2

Query: 95  MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESI 253
           MSSAQDPFYIVKEEIQ+SIDKLQS+FHQW+ IS + GD+V LTK+LLAACESI
Sbjct: 1   MSSAQDPFYIVKEEIQESIDKLQSSFHQWERISCDMGDQVHLTKDLLAACESI 53


>ref|XP_002459155.1| hypothetical protein SORBIDRAFT_03g046820 [Sorghum bicolor]
           gi|241931130|gb|EES04275.1| hypothetical protein
           SORBIDRAFT_03g046820 [Sorghum bicolor]
          Length = 232

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = +2

Query: 95  MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESI 253
           MSSAQDPFYIV+EEIQDSIDKLQSTFH+W+  +SNTG+ V LTKELL +CESI
Sbjct: 1   MSSAQDPFYIVREEIQDSIDKLQSTFHRWEQTASNTGEYVHLTKELLTSCESI 53


>emb|CBI24703.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = +2

Query: 92  KMSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESI 253
           KMSSAQDPFYIVKEEIQ+SIDKL STFHQW+ I   TG++V LTKELLA+CESI
Sbjct: 54  KMSSAQDPFYIVKEEIQESIDKLLSTFHQWERIPVETGEQVHLTKELLASCESI 107


>ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus]
           gi|449474827|ref|XP_004154296.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
           gi|449498935|ref|XP_004160675.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
          Length = 246

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/53 (75%), Positives = 50/53 (94%)
 Frame = +2

Query: 95  MSSAQDPFYIVKEEIQDSIDKLQSTFHQWQNISSNTGDRVRLTKELLAACESI 253
           M SAQDPFY+VK+EIQ+SIDKLQS+FHQW+ ISS++G+RV+ TKELLA+CESI
Sbjct: 1   MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESI 53


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