BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015624
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20053.3| unnamed protein product [Vitis vinifera]              166   7e-39
ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containi...   166   7e-39
ref|XP_002519129.1| pentatricopeptide repeat-containing protein,...   161   2e-37
ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containi...   160   4e-37
ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containi...   159   9e-37

>emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  166 bits (419), Expect = 7e-39
 Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
 Frame = +2

Query: 203 LIKNTLFEYRNKPIELLKLIDNLGTAHFDLNCFCLAVSILSSLNSPQHAVQLMKKGIEKG 382
           LI N L+   +KP  +   I +L     D   +CLAV +L+ L SP+ A+QL+K+ +   
Sbjct: 75  LISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQ-VMGT 133

Query: 383 YVKSNNEVFKEFESLE--MSNTTTLVYDILISTYCKLKKAEEGLECFYFMMDRNVVPKIE 556
            + +N E+F E       +S  +++V+D+L+   C+L++A+E  +CFY M ++ +VPKIE
Sbjct: 134 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 193

Query: 557 TCNELLSLLSKQNKTQMVWVLYAEMYKLKMKSTVVTFNVMINVLCXXXXXXXXXXXXXXX 736
           TCN++LSL  K N+ +M WVLYAEM++L++ STV TFN+M+NVLC               
Sbjct: 194 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 253

Query: 737 XDLGFKPNAITYNTIIHRYCLNG 805
             LGFKPN ++YNTIIH Y   G
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRG 276


>ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  166 bits (419), Expect = 7e-39
 Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
 Frame = +2

Query: 203 LIKNTLFEYRNKPIELLKLIDNLGTAHFDLNCFCLAVSILSSLNSPQHAVQLMKKGIEKG 382
           LI N L+   +KP  +   I +L     D   +CLAV +L+ L SP+ A+QL+K+ +   
Sbjct: 97  LISNVLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQ-VMGT 155

Query: 383 YVKSNNEVFKEFESLE--MSNTTTLVYDILISTYCKLKKAEEGLECFYFMMDRNVVPKIE 556
            + +N E+F E       +S  +++V+D+L+   C+L++A+E  +CFY M ++ +VPKIE
Sbjct: 156 RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIE 215

Query: 557 TCNELLSLLSKQNKTQMVWVLYAEMYKLKMKSTVVTFNVMINVLCXXXXXXXXXXXXXXX 736
           TCN++LSL  K N+ +M WVLYAEM++L++ STV TFN+M+NVLC               
Sbjct: 216 TCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFM 275

Query: 737 XDLGFKPNAITYNTIIHRYCLNG 805
             LGFKPN ++YNTIIH Y   G
Sbjct: 276 EGLGFKPNVVSYNTIIHGYSSRG 298


>ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541792|gb|EEF43340.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 643

 Score =  161 bits (407), Expect = 2e-37
 Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 2/206 (0%)
 Frame = +2

Query: 194 SLTLIKNTLFEYRNKPIELLKLIDNLGTAHFDLNCFCLAVSILSSLNSPQHAVQLMKKGI 373
           S +LI  TL     K    L+ + ++G    D+   CLAV+++S   SP+  + L+K+ I
Sbjct: 81  SPSLISATLLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTI 140

Query: 374 EKGYVKSNNEVFKEFESLE--MSNTTTLVYDILISTYCKLKKAEEGLECFYFMMDRNVVP 547
           E   V    +VF E       +   +++V+D+LI   C+LK+ ++  ECF  M ++ VVP
Sbjct: 141 ESR-VAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVP 199

Query: 548 KIETCNELLSLLSKQNKTQMVWVLYAEMYKLKMKSTVVTFNVMINVLCXXXXXXXXXXXX 727
           KIET N +LSL  K N+T+ VWVLYAEM++LK+KSTV TFN+MINVLC            
Sbjct: 200 KIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFI 259

Query: 728 XXXXDLGFKPNAITYNTIIHRYCLNG 805
               +LG KPN +TYNT+IH YC  G
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRG 285


>ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  160 bits (404), Expect = 4e-37
 Identities = 84/209 (40%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
 Frame = +2

Query: 191 SSLT--LIKNTLFEYRNKPIELLKLIDNLGTAHFDLNCFCLAVSILSSLNSPQHAVQLMK 364
           SSLT  LI  TL      P  +L  +++      D    CLA+ I++ L SP+ A+ L+K
Sbjct: 62  SSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLK 121

Query: 365 KGIEKGYVKSNNEVFKEFESLE--MSNTTTLVYDILISTYCKLKKAEEGLECFYFMMDRN 538
           + +  G   S  E+F+   +    +   +++V+D LI + C + +A+E  ECFY M ++ 
Sbjct: 122 QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKG 181

Query: 539 VVPKIETCNELLSLLSKQNKTQMVWVLYAEMYKLKMKSTVVTFNVMINVLCXXXXXXXXX 718
           V+P IETCN LLSL  K N+T+  WVLYAEM++L++KS+V TFN+MINVLC         
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241

Query: 719 XXXXXXXDLGFKPNAITYNTIIHRYCLNG 805
                    G KPN +TYNTI+H YC +G
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSG 270


>ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  159 bits (401), Expect = 9e-37
 Identities = 83/209 (39%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
 Frame = +2

Query: 191 SSLT--LIKNTLFEYRNKPIELLKLIDNLGTAHFDLNCFCLAVSILSSLNSPQHAVQLMK 364
           SSLT  LI  TL      P  +L  +++      D    CLA+ I++ L SP+ A+ L++
Sbjct: 62  SSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLR 121

Query: 365 KGIEKGYVKSNNEVFKEFESLE--MSNTTTLVYDILISTYCKLKKAEEGLECFYFMMDRN 538
           + +  G   S  E+F+   +    +   +++V+D LI + C + +A+E  ECFY M ++ 
Sbjct: 122 QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKG 181

Query: 539 VVPKIETCNELLSLLSKQNKTQMVWVLYAEMYKLKMKSTVVTFNVMINVLCXXXXXXXXX 718
           V+P IETCN LLSL  K N+T+  WVLYAEM++L++KS+V TFN+MINVLC         
Sbjct: 182 VLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAK 241

Query: 719 XXXXXXXDLGFKPNAITYNTIIHRYCLNG 805
                    G KPN +TYNTI+H YC +G
Sbjct: 242 DFVGHMETSGVKPNIVTYNTIVHGYCSSG 270