BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015622
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMA...   604   e-170
ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   604   e-170
ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vi...   602   e-170
ref|XP_002525636.1| DNA damage-binding protein, putative [Ricinu...   592   e-166
ref|XP_002299813.1| predicted protein [Populus trichocarpa] gi|2...   581   e-163

>ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMAGED DNA-BINDING 2-like
            [Cucumis sativus]
          Length = 562

 Score =  604 bits (1557), Expect = e-170
 Identities = 277/395 (70%), Positives = 327/395 (82%)
 Frame = +3

Query: 171  MPPTTRRMSFPRVVIERDTDXXXXXXXXXXXPQNFDHXXXXXXXXXXXXXXXXXAKVLED 350
            MPPTTR +SFPRV++E+DTD             + +                   ++ E+
Sbjct: 1    MPPTTRSLSFPRVIVEKDTDSEHSSSEEEEEEDDEEPLDDEDEDENGKSFENEGQRIEEE 60

Query: 351  VKKKGKAPITISLKKVCKVCKQTGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVS 530
              KKGKAPIT+SLKKVCKVCK+TGHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPHRV+
Sbjct: 61   SSKKGKAPITLSLKKVCKVCKRTGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVA 120

Query: 531  MEHGVVPARKRSTRSPLDFVFERQIRTNVPKIKPAFVVPDQVDCAVIRYHSRRVTCLEFH 710
             E GV+PA  ++TR+ L +VFERQ + ++P IKPA+V+PDQV+CAVIRYHSRRVTCLEFH
Sbjct: 121  TEFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFH 180

Query: 711  PTNNHILLSGDKKGQLGVWDYDKVHEKTVYSNIHSCILNNMRFSPSNDGTLYAASSDGTI 890
            PTNN +LLSGDKKGQ+GVWDYDKVHEK VY NIHSCI+NNMRFSP+NDG +YAASSDGTI
Sbjct: 181  PTNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTI 240

Query: 891  SCTDLETGMSSALMNLNPDGWHGPSSWRMLYGMDVNADKSLVLVADNIGYLYMMDMRSHN 1070
            SCTD+ETG SS LMNLNPDGW GP+SWRMLYGMD+N +K  V VADN G+LY++D RS+N
Sbjct: 241  SCTDMETGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNN 300

Query: 1071 KTGEEILIHKKGSKVVGLQCNPVQPELLLSCGNDHFARIWDMRKLEAQSSLVDLPHKRVV 1250
            ++G+ +LIHKKGSKVVGL CNP+QP+LLLSCGNDHFARIWD+R+L   SSL DL H+RVV
Sbjct: 301  RSGQAVLIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVV 360

Query: 1251 NAAYFSPRSGSKILTTAQDNRIRIWDSIFGNLESP 1355
            N+AYFSP SG KILTT+QDNRIR+WDSIFGNL+SP
Sbjct: 361  NSAYFSPISGCKILTTSQDNRIRVWDSIFGNLDSP 395


>ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Cucumis sativus]
          Length = 562

 Score =  604 bits (1557), Expect = e-170
 Identities = 277/395 (70%), Positives = 327/395 (82%)
 Frame = +3

Query: 171  MPPTTRRMSFPRVVIERDTDXXXXXXXXXXXPQNFDHXXXXXXXXXXXXXXXXXAKVLED 350
            MPPTTR +SFPRV++E+DTD             + +                   ++ E+
Sbjct: 1    MPPTTRSLSFPRVIVEKDTDSEHSSSEEEEEEDDEEPLDDEDEDENGKSFENEGQRIEEE 60

Query: 351  VKKKGKAPITISLKKVCKVCKQTGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVS 530
              KKGKAPIT+SLKKVCKVCK+TGHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPHRV+
Sbjct: 61   SSKKGKAPITLSLKKVCKVCKRTGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVA 120

Query: 531  MEHGVVPARKRSTRSPLDFVFERQIRTNVPKIKPAFVVPDQVDCAVIRYHSRRVTCLEFH 710
             E GV+PA  ++TR+ L +VFERQ + ++P IKPA+V+PDQV+CAVIRYHSRRVTCLEFH
Sbjct: 121  TEFGVIPASHKNTRNALLYVFERQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFH 180

Query: 711  PTNNHILLSGDKKGQLGVWDYDKVHEKTVYSNIHSCILNNMRFSPSNDGTLYAASSDGTI 890
            PTNN +LLSGDKKGQ+GVWDYDKVHEK VY NIHSCI+NNMRFSP+NDG +YAASSDGTI
Sbjct: 181  PTNNRLLLSGDKKGQVGVWDYDKVHEKVVYGNIHSCIVNNMRFSPTNDGMIYAASSDGTI 240

Query: 891  SCTDLETGMSSALMNLNPDGWHGPSSWRMLYGMDVNADKSLVLVADNIGYLYMMDMRSHN 1070
            SCTD+ETG SS LMNLNPDGW GP+SWRMLYGMD+N +K  V VADN G+LY++D RS+N
Sbjct: 241  SCTDMETGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNN 300

Query: 1071 KTGEEILIHKKGSKVVGLQCNPVQPELLLSCGNDHFARIWDMRKLEAQSSLVDLPHKRVV 1250
            ++G+ +LIHKKGSKVVGL CNP+QP+LLLSCGNDHFARIWD+R+L   SSL DL H+RVV
Sbjct: 301  RSGQAVLIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVV 360

Query: 1251 NAAYFSPRSGSKILTTAQDNRIRIWDSIFGNLESP 1355
            N+AYFSP SG KILTT+QDNRIR+WDSIFGNL+SP
Sbjct: 361  NSAYFSPISGCKILTTSQDNRIRVWDSIFGNLDSP 395


>ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera]
            gi|147833025|emb|CAN61895.1| hypothetical protein
            VITISV_028792 [Vitis vinifera]
            gi|297745903|emb|CBI15959.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score =  602 bits (1551), Expect = e-170
 Identities = 286/395 (72%), Positives = 326/395 (82%)
 Frame = +3

Query: 171  MPPTTRRMSFPRVVIERDTDXXXXXXXXXXXPQNFDHXXXXXXXXXXXXXXXXXAKVLED 350
            M P TRR SFPRVVIERDT+               +                   +    
Sbjct: 1    MAPRTRRGSFPRVVIERDTESEKSSSSEEEEDPEPEVQEEEESEELAEVENGENVEEGLG 60

Query: 351  VKKKGKAPITISLKKVCKVCKQTGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVS 530
             KKK + PITI+L KVCKVCK+ GHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPH+V+
Sbjct: 61   SKKKERVPITIALTKVCKVCKRKGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHKVA 120

Query: 531  MEHGVVPARKRSTRSPLDFVFERQIRTNVPKIKPAFVVPDQVDCAVIRYHSRRVTCLEFH 710
             EHGV+PA  R+TRS LD+VF RQ++ ++P IK AF+VP+QVDCAVIRYHSRRVTCLEFH
Sbjct: 121  TEHGVIPAPNRNTRSSLDYVFRRQLQPDIPAIKTAFIVPNQVDCAVIRYHSRRVTCLEFH 180

Query: 711  PTNNHILLSGDKKGQLGVWDYDKVHEKTVYSNIHSCILNNMRFSPSNDGTLYAASSDGTI 890
            PTNN+ILLSGDKKGQLGVWDY+KVHEKTVY NIH CILNNMRF P+ND T+YAASSDGTI
Sbjct: 181  PTNNNILLSGDKKGQLGVWDYNKVHEKTVYGNIHHCILNNMRFKPTNDETIYAASSDGTI 240

Query: 891  SCTDLETGMSSALMNLNPDGWHGPSSWRMLYGMDVNADKSLVLVADNIGYLYMMDMRSHN 1070
            SCTDLETG+SS+LMNLNP+GW GPS+WRMLYGMD+N++K LVLVADN G+LY++D RS+N
Sbjct: 241  SCTDLETGISSSLMNLNPNGWEGPSTWRMLYGMDINSEKGLVLVADNFGFLYLVDTRSNN 300

Query: 1071 KTGEEILIHKKGSKVVGLQCNPVQPELLLSCGNDHFARIWDMRKLEAQSSLVDLPHKRVV 1250
            +TGE ILIHKKGSKVVGL CNP+QPELLLSCGNDHFARIWDMR+LEA SSL +LPH RVV
Sbjct: 301  QTGEAILIHKKGSKVVGLHCNPLQPELLLSCGNDHFARIWDMRRLEAGSSLHNLPHGRVV 360

Query: 1251 NAAYFSPRSGSKILTTAQDNRIRIWDSIFGNLESP 1355
            NAAYFSP+SG KILTT+QDNRIR+WDSIFGNL SP
Sbjct: 361  NAAYFSPQSGCKILTTSQDNRIRVWDSIFGNLNSP 395


>ref|XP_002525636.1| DNA damage-binding protein, putative [Ricinus communis]
            gi|223535072|gb|EEF36754.1| DNA damage-binding protein,
            putative [Ricinus communis]
          Length = 558

 Score =  592 bits (1525), Expect = e-166
 Identities = 276/395 (69%), Positives = 324/395 (82%)
 Frame = +3

Query: 171  MPPTTRRMSFPRVVIERDTDXXXXXXXXXXXPQNFDHXXXXXXXXXXXXXXXXXAKVLED 350
            M P TR M FP+VVIERDTD             N +                       D
Sbjct: 1    MAPQTRGMGFPKVVIERDTDSEQSSSSSNDEDDNENEGQSESDEQVTATKNEEDL----D 56

Query: 351  VKKKGKAPITISLKKVCKVCKQTGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVS 530
              KK KAPITISLKKVCKVCK+ GHEAGFKGATYIDCPMKPC+LCKMPGHTT++CPHRV+
Sbjct: 57   SNKKWKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTISCPHRVA 116

Query: 531  MEHGVVPARKRSTRSPLDFVFERQIRTNVPKIKPAFVVPDQVDCAVIRYHSRRVTCLEFH 710
            +E+G++ A +R+T + L +VF+RQ+R ++P+IKP +V+PDQV CAVIRYHSRRVTCLEFH
Sbjct: 117  IENGIISAPQRNTHNTLQYVFQRQLRPSIPQIKPTYVIPDQVCCAVIRYHSRRVTCLEFH 176

Query: 711  PTNNHILLSGDKKGQLGVWDYDKVHEKTVYSNIHSCILNNMRFSPSNDGTLYAASSDGTI 890
            PT N+ILLSGDKKGQ+GVWD+DKVHEK +Y NIH+CI+NNMRF+PSNDG +YAASSDGTI
Sbjct: 177  PTKNNILLSGDKKGQVGVWDFDKVHEKMIYGNIHTCIVNNMRFNPSNDGMMYAASSDGTI 236

Query: 891  SCTDLETGMSSALMNLNPDGWHGPSSWRMLYGMDVNADKSLVLVADNIGYLYMMDMRSHN 1070
            SCTD+ETG+SS+LMNLNPDGW GP +WRMLYGMD+N +K +V+VADN G+LYM+DMR +N
Sbjct: 237  SCTDMETGISSSLMNLNPDGWQGPRNWRMLYGMDINTEKGVVVVADNFGFLYMLDMRLNN 296

Query: 1071 KTGEEILIHKKGSKVVGLQCNPVQPELLLSCGNDHFARIWDMRKLEAQSSLVDLPHKRVV 1250
            K G+EILIHKKGSKVVGL CNPV PELLLSCGNDHFARIWD+R+LEA SSL DL HKRVV
Sbjct: 297  KIGKEILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDLRQLEAGSSLCDLEHKRVV 356

Query: 1251 NAAYFSPRSGSKILTTAQDNRIRIWDSIFGNLESP 1355
            N AYFSP SGSKILTT+QDNR+R+WDSIFGNL+SP
Sbjct: 357  NCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSP 391


>ref|XP_002299813.1| predicted protein [Populus trichocarpa] gi|222847071|gb|EEE84618.1|
            predicted protein [Populus trichocarpa]
          Length = 557

 Score =  581 bits (1497), Expect = e-163
 Identities = 277/393 (70%), Positives = 324/393 (82%), Gaps = 5/393 (1%)
 Frame = +3

Query: 192  MSFPRVVIERDTDXXXXXXXXXXXPQNFDHXXXXXXXXXXXXXXXXXA---KVLEDV--K 356
            M+FP+V+IERDTD               +                      ++ ED+  K
Sbjct: 1    MAFPKVLIERDTDSEQSSSSDDEDELEEEDEGPPSESEPEEEDSTKNGYEERIEEDLSLK 60

Query: 357  KKGKAPITISLKKVCKVCKQTGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSME 536
            KKGKAPITISLKKVCKVCK+ GHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPHRV++E
Sbjct: 61   KKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVAIE 120

Query: 537  HGVVPARKRSTRSPLDFVFERQIRTNVPKIKPAFVVPDQVDCAVIRYHSRRVTCLEFHPT 716
            HGV+PA + ST + +++V +RQ+R  +  IKPA+V+PDQV CAVIRYHSRRVTCLEFHPT
Sbjct: 121  HGVIPAPRTSTHNTVEYVLQRQLRPRILPIKPAYVIPDQVCCAVIRYHSRRVTCLEFHPT 180

Query: 717  NNHILLSGDKKGQLGVWDYDKVHEKTVYSNIHSCILNNMRFSPSNDGTLYAASSDGTISC 896
             N+ILLSGDKKGQ+GVWD+DKVHE+ VY NIH+CI+NNMRF  +NDG +YAASSDGTIS 
Sbjct: 181  KNNILLSGDKKGQVGVWDFDKVHERMVYQNIHTCIVNNMRFKSTNDGMVYAASSDGTISS 240

Query: 897  TDLETGMSSALMNLNPDGWHGPSSWRMLYGMDVNADKSLVLVADNIGYLYMMDMRSHNKT 1076
            TDLETGMSS+LMNLNP+GW GPS+WRMLYGMD+N++K +VLVADN G+LYM+D RS++K 
Sbjct: 241  TDLETGMSSSLMNLNPNGWQGPSNWRMLYGMDINSEKGVVLVADNFGFLYMVDTRSNSKI 300

Query: 1077 GEEILIHKKGSKVVGLQCNPVQPELLLSCGNDHFARIWDMRKLEAQSSLVDLPHKRVVNA 1256
            GE ILIHKKGSKVVGL CNPVQPELLLSCGNDHFARIWDMR+L+A SSL DL HKRVVN+
Sbjct: 301  GEAILIHKKGSKVVGLHCNPVQPELLLSCGNDHFARIWDMRQLKAGSSLSDLAHKRVVNS 360

Query: 1257 AYFSPRSGSKILTTAQDNRIRIWDSIFGNLESP 1355
            AYFSP SGSKILTT+QDNR+RIWDSIFGNL+SP
Sbjct: 361  AYFSPLSGSKILTTSQDNRLRIWDSIFGNLDSP 393