BLASTX nr result

ID: Coptis24_contig00015617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015617
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    77   1e-12
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    65   6e-09
ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782...    62   4e-08
ref|XP_003516321.1| PREDICTED: LOW QUALITY PROTEIN: laccase-25-l...    55   8e-06

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
 Frame = +2

Query: 44  LDFTDTFKTDVVFNSRDELIRWARDLGKSIGMVVVIKRSDVGSSGRV-PRVFMACERFG- 217
           +D+T+ F TD +  SR+ LI W R+ GK  GMV++I+R+D+G++ R  PR+   CER G 
Sbjct: 1   MDYTNVFTTDAIHPSREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGA 60

Query: 218 ------KKSEHPFTKKAQKM--SKGFNCPFLLRGLKMPKDD 316
                  K E    K+ +K   +K   CPF LRG+K+P  D
Sbjct: 61  YRHTGXDKGEEGKKKRKRKATGTKKCGCPFSLRGIKLPLAD 101


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
 Frame = +2

Query: 44  LDFTDTFKTDVVFNSRDELIRWARDLGKSIGMVVVIKRSDVGS----SGRVPRVFMACER 211
           +D++D F T  VF +R+ L+ WAR +G+  G  V+I+RSD G      GR   V + CER
Sbjct: 498 VDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCER 557

Query: 212 FGKKSEHPFTKKAQKMSKGFNCPFLLRGLKMPKDD 316
            GK  ++      +  +K   CPF LRG  +   D
Sbjct: 558 SGKYRQYKDALARKTGTKKCGCPFRLRGRPVRNGD 592


>ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max]
          Length = 1403

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
 Frame = +2

Query: 47   DFTDTFKTDVVFNSRDELIRWARDLGKSIGMVVVIKRSD--VGSSGRVPR----VFMACE 208
            D +D FKT  +F SRD ++ WAR++ K  G V+ I RS+   GS+ +  R    V + CE
Sbjct: 796  DCSDAFKTTELFPSRDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKTYVILGCE 855

Query: 209  RFGKKSEHPFTKKAQKMSKGFNCPFLLRGLKMPKDD 316
            R GK   +  T      SK   CPF L+G  + KD+
Sbjct: 856  RSGKYRPYKNTLSKVTSSKKCECPFKLKGKALNKDE 891


>ref|XP_003516321.1| PREDICTED: LOW QUALITY PROTEIN: laccase-25-like [Glycine max]
          Length = 876

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = +2

Query: 35  LEKLDFTDTFKTDVVFNSRDELIRWARDLGKSIGMVVVIKRSD--VGSSGRVPRVFMACE 208
           +E +D +D F T  +F SRDE+++W R +   I  + VI RSD  +G  GRV  + +ACE
Sbjct: 329 VEHVDCSDAFNTSQLFASRDEVLQWVRSVTHDIEFIAVIMRSDTNIGVRGRVSFLLIACE 388

Query: 209 RFGK 220
           R G+
Sbjct: 389 RSGE 392


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