BLASTX nr result

ID: Coptis24_contig00015610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015610
         (1999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15748.3| unnamed protein product [Vitis vinifera]              316   1e-83
ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [V...   313   1e-82
gb|AFI49627.1| inducer of CBF expression 1 [Vitis vinifera]           311   4e-82
ref|XP_002275711.1| PREDICTED: transcription factor ICE1 isoform...   311   4e-82
gb|AGF25264.1| inducer of CBF expression 1-6 [Musa AB Group]          311   5e-82

>emb|CBI15748.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  316 bits (810), Expect = 1e-83
 Identities = 187/316 (59%), Positives = 205/316 (64%), Gaps = 9/316 (2%)
 Frame = -3

Query: 1265 NRSKVLRPLEISPQLGAQPTLFQKRAAALRQNSDKGGNLIRLGEEG----MG-----KRK 1113
            NRSK+LRPLE  P +GAQPTLFQKRAA  +  +D G  L  LG EG    MG     K +
Sbjct: 177  NRSKLLRPLETFPSVGAQPTLFQKRAALRKNLADNGSILGGLGPEGGQREMGEENDRKWR 236

Query: 1112 KSSYEDEDDLSMDGDGSGFNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTITXXXXX 933
             S+ ED +D S+D   SG NY                              ST+T     
Sbjct: 237  NSNAEDIEDASIDA--SGLNYDSDELTENNKMEENGKNSGNNSNAN-----STVTGGDHK 289

Query: 932  XXXXGPPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIND 753
                G PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIN+
Sbjct: 290  GKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINN 349

Query: 752  LHNXXXXXXXXXXXXXXXXXXXXXXXXXXXPCRVKEELCSSSFPSPNNQPARVEVRMREG 573
            LHN                           PCR+KEELC SS  SPN QPARVEVR REG
Sbjct: 350  LHNELESTPPGSSLTPTTSFHPLTPTPPTLPCRIKEELCPSSLSSPNGQPARVEVRAREG 409

Query: 572  RAVNIHMFCSRRPGLLMSTMKALDDLGLDIQQAVISCFDGFALDVFRAEQGKEVPDALPE 393
            RAVNIHMFC RRPGLL+STM+ALD LGLDIQQAVISCF+GFALD+FRAEQ KE  D  PE
Sbjct: 410  RAVNIHMFCGRRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDIFRAEQSKEGQDVHPE 469

Query: 392  TIKAVLLNSAGYHGVM 345
             IKAVLL+SAG+HG+M
Sbjct: 470  QIKAVLLDSAGFHGMM 485


>ref|XP_002284528.1| PREDICTED: transcription factor ICE1-like [Vitis vinifera]
          Length = 550

 Score =  313 bits (801), Expect = 1e-82
 Identities = 187/327 (57%), Positives = 205/327 (62%), Gaps = 20/327 (6%)
 Frame = -3

Query: 1265 NRSKVLRPLEISPQLGAQPTLFQKRAAALRQNSDKGGNLIRLGEEG----------MGKR 1116
            NRSK+LRPLE  P +GAQPTLFQKRAA  +  +D G  L  LG EG           GKR
Sbjct: 231  NRSKLLRPLETFPSVGAQPTLFQKRAALRKNLADNGSILGGLGPEGGQVLSGVEDDKGKR 290

Query: 1115 ----------KKSSYEDEDDLSMDGDGSGFNYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 966
                      + S+ ED +D S+D   SG NY                            
Sbjct: 291  EMGEENDRKWRNSNAEDIEDASIDA--SGLNYDSDELTENNKMEENGKNSGNNSNAN--- 345

Query: 965  XNSTITXXXXXXXXXGPPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIE 786
              ST+T         G PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIE
Sbjct: 346  --STVTGGDHKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIE 403

Query: 785  YLKELLQRINDLHNXXXXXXXXXXXXXXXXXXXXXXXXXXXPCRVKEELCSSSFPSPNNQ 606
            YLKELLQRIN+LHN                           PCR+KEELC SS  SPN Q
Sbjct: 404  YLKELLQRINNLHNELESTPPGSSLTPTTSFHPLTPTPPTLPCRIKEELCPSSLSSPNGQ 463

Query: 605  PARVEVRMREGRAVNIHMFCSRRPGLLMSTMKALDDLGLDIQQAVISCFDGFALDVFRAE 426
            PARVEVR REGRAVNIHMFC RRPGLL+STM+ALD LGLDIQQAVISCF+GFALD+FRAE
Sbjct: 464  PARVEVRAREGRAVNIHMFCGRRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDIFRAE 523

Query: 425  QGKEVPDALPETIKAVLLNSAGYHGVM 345
            Q KE  D  PE IKAVLL+SAG+HG+M
Sbjct: 524  QSKEGQDVHPEQIKAVLLDSAGFHGMM 550


>gb|AFI49627.1| inducer of CBF expression 1 [Vitis vinifera]
          Length = 538

 Score =  311 bits (797), Expect = 4e-82
 Identities = 213/421 (50%), Positives = 243/421 (57%), Gaps = 39/421 (9%)
 Frame = -3

Query: 1490 FDNNAFVDLSYDPSFLP-------SQTPFLL------NDHHLGTT--STTSNHFMSSLAQ 1356
            FDN    DL  +P FL        S +P L+      +   +GTT  S++S   +S L  
Sbjct: 133  FDNG--FDLGCEPGFLAPLQGIQSSNSPGLMGFTGLSSQTQMGTTELSSSSEFPISRLLP 190

Query: 1355 NNEETXXXXXXXXXXXXXXXXXXXNPLMSFNRSKVLRPLEISPQLGAQPTLFQKRAAALR 1176
             ++ T                   N L   NRSKVLRPLE+ P +GAQPTLFQKRAA LR
Sbjct: 191  ASDSTGSLGAGFTPTGFEGFDGSGNSLF-LNRSKVLRPLEVFPPVGAQPTLFQKRAA-LR 248

Query: 1175 QNS---DKGGNLIRLG--------------------EEGMGKRKKSSYEDEDDLSMDGDG 1065
            Q+S   DK GNL  LG                    EE   KR K+  E+ D+ S D   
Sbjct: 249  QSSSASDKLGNLGFLGSRSSEVQTMVVDGNWGNRVDEELEKKRNKNEEEEIDEGSFDV-- 306

Query: 1064 SGFNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSTITXXXXXXXXXGPPAKNLMAERR 885
            SG NY                              ST+T         G PAKNLMAERR
Sbjct: 307  SGLNYDSDEPTVDELAKNGGSNSNAN---------STVTGGDQKGKKKGLPAKNLMAERR 357

Query: 884  RRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNXXXXXXXXXXXXX 705
            RRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHN             
Sbjct: 358  RRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPSGSLLAP 417

Query: 704  XXXXXXXXXXXXXXP-CRVKEELCSSSFPSPNNQPARVEVRMREGRAVNIHMFCSRRPGL 528
                            CRVKEELC SS PSP +QPARVEVR+REGRAVNIHMFC+RRPGL
Sbjct: 418  ASTSFHPLTPTPPTLPCRVKEELCPSSLPSPKSQPARVEVRVREGRAVNIHMFCARRPGL 477

Query: 527  LMSTMKALDDLGLDIQQAVISCFDGFALDVFRAEQGKEVPDALPETIKAVLLNSAGYHGV 348
            L+STM+ALD+LGLDIQQAVISCF+GFALDVFRAEQ +E  D LP+ IKAVLL+SAG+HG+
Sbjct: 478  LLSTMRALDNLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPDQIKAVLLDSAGFHGM 537

Query: 347  M 345
            +
Sbjct: 538  L 538


>ref|XP_002275711.1| PREDICTED: transcription factor ICE1 isoform 1 [Vitis vinifera]
          Length = 538

 Score =  311 bits (797), Expect = 4e-82
 Identities = 191/330 (57%), Positives = 212/330 (64%), Gaps = 23/330 (6%)
 Frame = -3

Query: 1265 NRSKVLRPLEISPQLGAQPTLFQKRAAALRQNS---DKGGNLIRLG-------------- 1137
            NRSKVLRPLE+ P +GAQPTLFQKRAA LRQ+S   DK GNL  LG              
Sbjct: 220  NRSKVLRPLEVFPPVGAQPTLFQKRAA-LRQSSSASDKLGNLGFLGCRSSEVQTMVVDGN 278

Query: 1136 -----EEGMGKRKKSSYEDEDDLSMDGDGSGFNYXXXXXXXXXXXXXXXXXXXXXXXXXX 972
                 +E + K+K  + E+E D     D SG NY                          
Sbjct: 279  WGNRVDEELEKKKNKNEEEEIDEG-SFDVSGLNYDSDEPTVDELAKNGGSNSNAN----- 332

Query: 971  XXXNSTITXXXXXXXXXGPPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 792
                ST+T         G PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA
Sbjct: 333  ----STVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 388

Query: 791  IEYLKELLQRINDLHNXXXXXXXXXXXXXXXXXXXXXXXXXXXP-CRVKEELCSSSFPSP 615
            IEYLKELLQRINDLHN                             CRVKEELC SS PSP
Sbjct: 389  IEYLKELLQRINDLHNELESTPSGSLLAPASTSFHPLTPTPPTLPCRVKEELCPSSLPSP 448

Query: 614  NNQPARVEVRMREGRAVNIHMFCSRRPGLLMSTMKALDDLGLDIQQAVISCFDGFALDVF 435
             +QPARVEVR+REGRAVNIHMFC+RRPGLL+STM+ALD+LGLDIQQAVISCF+GFALDVF
Sbjct: 449  KSQPARVEVRVREGRAVNIHMFCARRPGLLLSTMRALDNLGLDIQQAVISCFNGFALDVF 508

Query: 434  RAEQGKEVPDALPETIKAVLLNSAGYHGVM 345
            RAEQ +E  D LPE IKAVLL+SAG+HG++
Sbjct: 509  RAEQCREGQDVLPEQIKAVLLDSAGFHGML 538


>gb|AGF25264.1| inducer of CBF expression 1-6 [Musa AB Group]
          Length = 559

 Score =  311 bits (796), Expect = 5e-82
 Identities = 190/324 (58%), Positives = 206/324 (63%), Gaps = 21/324 (6%)
 Frame = -3

Query: 1265 NRSKVLRPLEISPQLGAQPTLFQKRAAA-LRQNS----DKGGNLIRLGEEGM--GKRKKS 1107
            NR KVLRPLEI P +GAQPTLFQKRAAA LRQNS    +KGG L     EG+  G R K+
Sbjct: 231  NRPKVLRPLEIFPPVGAQPTLFQKRAAAALRQNSSVSGEKGGFLGLWEWEGVVPGNRGKT 290

Query: 1106 SYEDEDDLSMDG-----------DGSGFNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 960
              E+E +    G           D SG NY                             N
Sbjct: 291  ELEEESNKKRKGYEEDEMDDGSIDASGLNYDTDDAAAENVIGEENANGGGGCGGSNSYAN 350

Query: 959  STITXXXXXXXXXGP-PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEY 783
            ST+T            PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEY
Sbjct: 351  STVTGGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEY 410

Query: 782  LKELLQRINDLHNXXXXXXXXXXXXXXXXXXXXXXXXXXXP--CRVKEELCSSSFPSPNN 609
            LKELL+RINDLHN                              CRVKEELC SS PSPN 
Sbjct: 411  LKELLRRINDLHNELESTPSSSSVPVTSATSFHPLTPTLPTLSCRVKEELCPSSVPSPNG 470

Query: 608  QPARVEVRMREGRAVNIHMFCSRRPGLLMSTMKALDDLGLDIQQAVISCFDGFALDVFRA 429
            QPARVEVR+REGRAVNIHMFC+RRPGLL+STM+ALD LG+DIQQAVISCF+GFA+DVFRA
Sbjct: 471  QPARVEVRVREGRAVNIHMFCARRPGLLLSTMRALDGLGIDIQQAVISCFNGFAMDVFRA 530

Query: 428  EQGKEVPDALPETIKAVLLNSAGY 357
            EQ KE P  LPE IKAVLLNSAG+
Sbjct: 531  EQSKEGPGVLPEDIKAVLLNSAGF 554


Top