BLASTX nr result

ID: Coptis24_contig00015605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015605
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449633.1| hypothetical protein SORBIDRAFT_05g020450 [S...    83   2e-13
ref|XP_002452166.1| hypothetical protein SORBIDRAFT_04g021060 [S...    83   2e-13
ref|XP_002443338.1| hypothetical protein SORBIDRAFT_08g017746 [S...    79   2e-12
ref|XP_002450018.1| hypothetical protein SORBIDRAFT_05g027120 [S...    78   5e-12
ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    76   2e-11

>ref|XP_002449633.1| hypothetical protein SORBIDRAFT_05g020450 [Sorghum bicolor]
           gi|241935476|gb|EES08621.1| hypothetical protein
           SORBIDRAFT_05g020450 [Sorghum bicolor]
          Length = 479

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 38/69 (55%), Positives = 48/69 (69%)
 Frame = +1

Query: 1   CR*VGPPSLFITFT*NPNWPEIKEVIEKSGQKAADRPDTISRVFMMKLDELMKDLRHGRQ 180
           CR  GPP  F+TFT NP WPEI E I ++GQ++ DR D + RVF MKL+EL+ DLRHG  
Sbjct: 404 CREYGPPDFFVTFTCNPKWPEISEGIMEAGQRSTDRGDIVVRVFHMKLEELLHDLRHGAI 463

Query: 181 FDLVNAGLI 207
           F    AG++
Sbjct: 464 FGPCTAGVL 472


>ref|XP_002452166.1| hypothetical protein SORBIDRAFT_04g021060 [Sorghum bicolor]
           gi|241931997|gb|EES05142.1| hypothetical protein
           SORBIDRAFT_04g021060 [Sorghum bicolor]
          Length = 479

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 38/69 (55%), Positives = 48/69 (69%)
 Frame = +1

Query: 1   CR*VGPPSLFITFT*NPNWPEIKEVIEKSGQKAADRPDTISRVFMMKLDELMKDLRHGRQ 180
           CR  GPP  F+TFT NP WPEI E I ++GQ++ DR D + RVF MKL+EL+ DLRHG  
Sbjct: 404 CREYGPPDFFVTFTCNPKWPEISEGIMEAGQRSTDRGDIVVRVFHMKLEELLHDLRHGAI 463

Query: 181 FDLVNAGLI 207
           F    AG++
Sbjct: 464 FGPCTAGVL 472


>ref|XP_002443338.1| hypothetical protein SORBIDRAFT_08g017746 [Sorghum bicolor]
           gi|241944031|gb|EES17176.1| hypothetical protein
           SORBIDRAFT_08g017746 [Sorghum bicolor]
          Length = 757

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = +1

Query: 1   CR*VGPPSLFITFT*NPNWPEIKEVIEKSGQKAADRPDTISRVFMMKLDELMKDLRHGRQ 180
           CR  GPP  F+TFT NP WPEI E + ++GQ+  DR D + R+F MKL+EL+ D+R G  
Sbjct: 320 CREYGPPDFFVTFTCNPKWPEIAEGVLEAGQRGTDRADVVVRIFNMKLEELLHDIRSGTV 379

Query: 181 FDLVNAG 201
           F   NAG
Sbjct: 380 FGRCNAG 386


>ref|XP_002450018.1| hypothetical protein SORBIDRAFT_05g027120 [Sorghum bicolor]
           gi|241935861|gb|EES09006.1| hypothetical protein
           SORBIDRAFT_05g027120 [Sorghum bicolor]
          Length = 384

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = +1

Query: 1   CR*VGPPSLFITFT*NPNWPEIKEVIEKSGQKAADRPDTISRVFMMKLDELMKDLRHG 174
           CR  GPP  F+TFT NP WPEI E I  +GQ++ DR D + RVF MKL+EL+ DLRHG
Sbjct: 320 CREYGPPDFFVTFTCNPKWPEITEGIMDAGQRSTDRSDIVVRVFNMKLEELLHDLRHG 377


>ref|XP_003605676.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355506731|gb|AES87873.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1561

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = +1

Query: 1   CR*VGPPSLFITFT*NPNWPEIKEVIEKSGQKAADRPDTISRVFMMKLDELMKDLRHGRQ 180
           C+  G P LFIT T N NWPEI++ +   G +A+DRPD + RVF MKLDE+M D +    
Sbjct: 583 CKRFGYPDLFITVTCNSNWPEIRDFVTSKGLQASDRPDIVCRVFKMKLDEIMADFKKNEI 642

Query: 181 FDLVNAGLIASMYQTR 228
           F  V AG+    +Q R
Sbjct: 643 FGKVIAGMYTVEFQKR 658


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