BLASTX nr result

ID: Coptis24_contig00015585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015585
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38303.1| unknown [Medicago truncatula]                          165   3e-39
ref|XP_003593899.1| Protease Do-like protein [Medicago truncatul...   165   3e-39
ref|XP_002278272.1| PREDICTED: protease Do-like 5, chloroplastic...   163   2e-38
gb|AFK39628.1| unknown [Lotus japonicus]                              160   8e-38
ref|XP_002316715.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>gb|AFK38303.1| unknown [Medicago truncatula]
          Length = 316

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/121 (68%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 PLARALD-DYDTDDEFQQQEERMVHLFQETSPSVVLIKDIELEK-NSNNSNEVMLLDDEN 185
           PL+ +L       DE QQQE+ +VHLFQETSPSVV IKDIEL K    +S EVML +DE+
Sbjct: 58  PLSLSLSLSQQLQDELQQQEDHLVHLFQETSPSVVSIKDIELTKVPKTSSKEVMLDEDED 117

Query: 184 AKVEGTGSGFIWDKTGHIVTNYHVIEKLATNASGLQRCKVYFVDTSGNRFSKEGKLVGFD 5
           AKVEGTGSGFIWDK GHIVTNYHV+ KLAT+ SGLQRCKV+ VD  GN FS+EGK++GFD
Sbjct: 118 AKVEGTGSGFIWDKFGHIVTNYHVVAKLATDTSGLQRCKVFLVDAKGNNFSREGKIIGFD 177

Query: 4   P 2
           P
Sbjct: 178 P 178


>ref|XP_003593899.1| Protease Do-like protein [Medicago truncatula]
           gi|355482947|gb|AES64150.1| Protease Do-like protein
           [Medicago truncatula]
          Length = 316

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/121 (68%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -1

Query: 358 PLARALD-DYDTDDEFQQQEERMVHLFQETSPSVVLIKDIELEK-NSNNSNEVMLLDDEN 185
           PL+ +L       DE QQQE+ +VHLFQETSPSVV IKDIEL K    +S EVML +DE+
Sbjct: 58  PLSLSLSLSQQLQDELQQQEDHLVHLFQETSPSVVSIKDIELTKVPKTSSKEVMLDEDED 117

Query: 184 AKVEGTGSGFIWDKTGHIVTNYHVIEKLATNASGLQRCKVYFVDTSGNRFSKEGKLVGFD 5
           AKVEGTGSGFIWDK GHIVTNYHV+ KLAT+ SGLQRCKV+ VD  GN FS+EGK++GFD
Sbjct: 118 AKVEGTGSGFIWDKFGHIVTNYHVVAKLATDTSGLQRCKVFLVDAKGNNFSREGKIIGFD 177

Query: 4   P 2
           P
Sbjct: 178 P 178


>ref|XP_002278272.1| PREDICTED: protease Do-like 5, chloroplastic [Vitis vinifera]
           gi|297740743|emb|CBI30925.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/108 (70%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = -1

Query: 322 DEFQQQEERMVHLFQETSPSVVLIKDIELEKN-SNNSNEVMLLDDENAKVEGTGSGFIWD 146
           D+FQQ EER+VHLFQ+TSPSVV IKD+E+ K+ +++SNE ML ++EN KVEGTGSGFIWD
Sbjct: 68  DQFQQDEERVVHLFQDTSPSVVFIKDLEIVKSPTSSSNESMLNENENTKVEGTGSGFIWD 127

Query: 145 KTGHIVTNYHVIEKLATNASGLQRCKVYFVDTSGNRFSKEGKLVGFDP 2
           K GHIVTNYHV+ KLAT+ SGLQRCKVY VD  GN FS+E K++G+DP
Sbjct: 128 KFGHIVTNYHVVAKLATDTSGLQRCKVYLVDAKGNSFSREAKIIGYDP 175


>gb|AFK39628.1| unknown [Lotus japonicus]
          Length = 315

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/108 (71%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = -1

Query: 322 DEFQQQEERMVHLFQETSPSVVLIKDIELEK-NSNNSNEVMLLDDENAKVEGTGSGFIWD 146
           DE QQ+E+ +V LFQETSPSVV IKD+EL K    +S+EVML +DE+AKVEGTGSGFIWD
Sbjct: 70  DELQQEEDNLVQLFQETSPSVVFIKDLELTKVPKTSSDEVMLNEDEDAKVEGTGSGFIWD 129

Query: 145 KTGHIVTNYHVIEKLATNASGLQRCKVYFVDTSGNRFSKEGKLVGFDP 2
           K GHIVTNYHV+ KLAT+ SGLQRCKV+ VDT GN F +EGK++GFDP
Sbjct: 130 KFGHIVTNYHVVAKLATDTSGLQRCKVFLVDTKGNSFYREGKIIGFDP 177


>ref|XP_002316715.1| predicted protein [Populus trichocarpa] gi|222859780|gb|EEE97327.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/108 (68%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
 Frame = -1

Query: 322 DEFQQQEERMVHLFQETSPSVVLIKDIELEKNSNNSNE-VMLLDDENAKVEGTGSGFIWD 146
           DE QQQE+R+ HLFQE+SPSVV IKDIEL K  N   +  ML +DENAKVEGTGSGFIWD
Sbjct: 53  DELQQQEDRVAHLFQESSPSVVFIKDIELAKVPNRPEDRFMLTEDENAKVEGTGSGFIWD 112

Query: 145 KTGHIVTNYHVIEKLATNASGLQRCKVYFVDTSGNRFSKEGKLVGFDP 2
           K GHIVTNYHV+ KLAT+ SGLQ CKV+ VD  GN   +EG ++GFDP
Sbjct: 113 KFGHIVTNYHVVAKLATDKSGLQCCKVFLVDAGGNSLYREGTIIGFDP 160


Top